| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 11.5% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 11.5% | 621.6 / 12.1 | 201 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (82/91); new base T (3/24); total (85/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 202 total aligned reads displayed.
TGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118359‑1118654 | aCCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGt > 1:1539257/1‑149 (MQ=255) ccGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCGTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTa < 2:4158774/149‑1 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTGATGTGCAGATTTGCGGCTCCGGGTAGGGTAAc > 1:1998797/1‑149 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt < 1:232098/149‑1 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt < 1:1650508/149‑1 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTTACGAACCAAAAGGGAGTTCATGTCCCGATTGGCGTCTCCGGTTATGGTCAACTTAtt > 1:2230440/1‑149 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt < 1:3924807/149‑1 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt > 2:2039747/1‑149 (MQ=255) ccACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGc > 2:317064/1‑149 (MQ=255) cACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGct > 2:4016482/1‑149 (MQ=255) aCTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGAGTTCATGTACAGATTTGCGTCTCCGGTTAGGGTAAACGTATTAGGctc > 1:3073797/1‑149 (MQ=255) aCTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc > 1:2789985/1‑149 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctct < 1:3370382/149‑1 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt < 2:1122607/149‑1 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt < 2:3004453/149‑1 (MQ=255) tCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTc < 1:1054264/149‑1 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGa < 2:1904459/149‑1 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGa < 2:1904760/149‑1 (MQ=255) tttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCaa < 1:3776909/149‑1 (MQ=255) ttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAACATATTAGGCTCTTCGCGACCaaa > 1:2115853/1‑148 (MQ=255) tCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAtt < 2:3234135/149‑1 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTg < 1:2194083/149‑1 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTgg > 2:651075/1‑149 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCATATTCGGCGCTTCGCGACCAATTTgg > 2:3291023/1‑149 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACCGGGAGGTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc > 2:3414545/1‑149 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 2:44186/149‑1 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACACGGAGTTCAAGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTAATTCGGCTCTTCGCGACCCATTTGGc > 1:4322813/1‑149 (MQ=255) aaGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCt < 1:817978/149‑1 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGt < 1:2470978/149‑1 (MQ=255) tCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTc < 1:1886118/149‑1 (MQ=255) cACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAgg < 2:4211796/149‑1 (MQ=255) cACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCAACAGGGAGTTCAATTCCAGATTTGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAgg > 2:696798/1‑149 (MQ=255) aCCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAAATTGGCTGGTCAGGt > 1:1751557/1‑149 (MQ=255) tttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTg < 2:3772774/149‑1 (MQ=255) ttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCa < 2:3822214/149‑1 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACaa < 2:3881306/149‑1 (MQ=255) tgtgagtgggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAata < 2:2815506/142‑1 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAata < 1:3106836/149‑1 (MQ=255) aaaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTGATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCGTCGCGACCAAATTTGCTGGTCAGGTTTGTAAGAACAatat > 1:972024/1‑149 (MQ=255) acacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 1:4107926/149‑1 (MQ=255) acacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 2:1696759/149‑1 (MQ=255) acacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 1:1657995/149‑1 (MQ=255) cacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATggg < 2:1625888/149‑1 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc < 1:3713841/149‑1 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc < 1:3487968/149‑1 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc < 1:908770/149‑1 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTAGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTTTCAGAACAATAAGGGCGTc > 2:2213357/1‑149 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGcc < 1:62418/149‑1 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGcc < 1:64640/149‑1 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGcc < 1:2663132/149‑1 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc < 1:2942551/149‑1 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc < 2:4047719/149‑1 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc < 1:4163618/149‑1 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGc < 2:3271249/149‑1 (MQ=255) tCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCGTATTAGGCTCATCGCGACCCAATTGGCTGGTCCGGTTTGTCAGAACAAAATGGGCGTCAGCCAccccc > 2:49334/1‑148 (MQ=255) cAGCTTCTGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCgg < 1:2096008/149‑1 (MQ=255) aGCTTCTGTTTCTTGGTCGCTTTCTGACTACCGAACTGGTTGTTCTTGTCCTGATTGGCGTCTCCGTTTTGGTTAACCTTTTTCGGATCTTCGCGACAATTTTGGCTGGTCTGTTTTGTAATAAAAATATGGGCGTCAGCCACGCCggg < 2:1280984/149‑1 (MQ=255) gCTTCAGTTTCATGGTCGCTTTCTGACAACCCAACAGGGAGTTCATGTCCAGATTTGCGTCTCCCGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCGGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCCGGt > 2:3634702/1‑149 (MQ=255) cAGTTTCATGGTCGCTTTCTGAATACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATGCGGCTCTCCGCCACCAATTGGGCTGGTCAGGTTTGACAGAACAATATGGGCGTCAGCCACGCCGGGTAAAc < 2:2228419/149‑1 (MQ=255) tgTTTCAGGGTCGCTTTCTGACTACCGACCAGGGAGTTCTTGTCCAGATTGGCGTCTCCGGTTGGGTTAACCTTATGCGGCTCTGCGCGACCATTTTGGCTGGTCAGGTTTGTCATAACAATCTGGGCGTCACCCACGCCGGGTAAAcc < 2:2230440/148‑1 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAAcc > 2:1044208/1‑149 (MQ=255) cttGGTCGCTTTCTGACTCCCGAACTGGGATTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGatat < 2:859147/147‑1 (MQ=255) cttGGTCGCTTTCTGACTACCGACCCGGGAGTTAATGTCCAGATTGGCGTCTCCGGTTTGGGTAACATTATTCGGCTCTTCGCTACAAATTGGGCTGGTCAGGTTTTTAAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGatat < 2:859072/147‑1 (MQ=255) ggTCGCTTTCTTACTACCTAACAGGGTGTTCTTTTCCAGATTGGCGTCTCCGTTTTGGGTAACCTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCTGGTTTGTCATAACATTATGGGCGACAGCCACGCCGGGTAAACCGATATCtt < 1:1404577/149‑1 (MQ=255) tCGCTTTCTGACTACCTAACCGGGTTTTCATGTCCATTTTGGCGTCTCGGGTTTGGTTAACCTTATTCGGCTCTTCGCGACAATTTTGGCTGGTCTGTTTTGTCATAAAAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCtttt < 1:1040952/149‑1 (MQ=255) tCGCTTTCTGACTACCGAACAGGGATTTCATGTCCAGATTGGCGTCTCCGGTTAGGTTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGACAGGTTTGACCGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtttt < 1:2104878/149‑1 (MQ=255) gCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTga > 2:2638088/1‑149 (MQ=255) cTGACTACCGAACAGGGAGTTCATGTCCCGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAat < 2:1998797/149‑1 (MQ=255) tGACTACCGAACTGGGTGTTCATGTCCAGATTGGCGTCTCCGGTTAGGTTAACCTTATGCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt < 2:2314838/149‑1 (MQ=255) tGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt > 1:2642794/1‑149 (MQ=255) tacaaCCGAACTGGTTTTTCTTGTCCAGTTTGGCGTCTCGGTTTTGGTTAACCTTTTTCGGCTCTTCGCGAAAATTTTGGCTGGTCTGTTTTTTCATAAAAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta < 1:1246919/145‑1 (MQ=255) aCTACCTAACTGGGTGTTCTTGTCCAGTTGGGCGTCTCCGTTTTGGTTAACCTTATTCGGCTCTTCGCGACAAATTGGGGTGGTCTGGTTTGTAAGAAAAATATGGGCGACACCCACGCCGGGTAAACCGATATCTTTTGAGAAattat < 1:2430531/149‑1 (MQ=255) aCTACCGAACTGGGAGTTATTGTCCAGTTTGGCGTCTCGGTTTTGGTTAACCTTTTTCGGTTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCATAACAATTTGGGCGTCCGCCACGCCGGGTAAACCGATATCTTTTGAGAAattat < 1:284225/149‑1 (MQ=255) tACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAAttatta > 1:1957265/1‑149 (MQ=255) tACCCAACTGGGAGTTCATGTCCAGTTTGGCGTCTCCGGTTAGGTTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAAttatta < 2:3197348/149‑1 (MQ=255) aCCGAACCGGGTGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCGGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATtattat < 2:4308287/149‑1 (MQ=255) aCCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATtattat > 1:4221379/1‑149 (MQ=255) cctaaCAGGTTGTTATTGTCCATTTTGGCTTCTCCGTTTAGGTTAACATTATTCGGCTCTTCGCTACCAATTTGGCTGTTCAGGTTTTTCAGAACATTATGGGGTTCTGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg < 2:817798/146‑1 (MQ=255) ccGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg < 2:1483034/149‑1 (MQ=255) aGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGc > 1:3018781/1‑149 (MQ=255) tGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGACAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTgg > 1:2846137/1‑149 (MQ=255) ccAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTa > 1:3408510/1‑149 (MQ=255) aGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATCTGGGCGTCAGCCACGCCGGGTAAACCGATATCGTTTGAGAAATTATTATGTTTCGCACGCGACTGGTTAAt > 1:1325743/1‑149 (MQ=255) gtttGGCTTGTCGGTTTTGGTTAACCTTATGGGGCTCTGCGCTACCTTTTGGGGTGTTCTGGTTTGTAACAAAAATAGGGGCTTCACCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt < 2:2594324/147‑1 (MQ=255) gATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt > 1:1798736/1‑149 (MQ=255) cttgggCGTCTCGGGTTTGTGTAACCTTATTGGGCTCTGCGCGACAATTTGGGCTGGTCTGGTTTGTCATAACATTTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt < 2:3094331/145‑1 (MQ=255) aTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttt > 1:2654900/1‑149 (MQ=255) ttGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc > 2:1421305/1‑149 (MQ=255) ttGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc > 2:1831588/1‑149 (MQ=255) ggCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCtt > 1:1386709/1‑149 (MQ=255) ggCGACTCCGGTTAGGGAAACATTATTCGGCTCTTCGCCACAATTTTGGGTGTTCTGTTTTTTCATAACAATTTGGGCGTCACCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCtt < 2:2330405/149‑1 (MQ=255) gggTCGCCGGTTTGGGTAACCTTATGCGGCTGTTCGCCACAATTTTGGCTGGTCTGGTTTGTCAGAACAATAGGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTAGGTTTCGCAAGCGACTGGTTAATTTCTTg < 2:3647399/147‑1 (MQ=255) tctcCGGTTAGGGTAACCTTTTTCGGCTCTTCGCGACCAATTGGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc < 2:346557/149‑1 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATTTTTCGCAAGCGACTGGTTAATTTCTtttta > 1:3830890/1‑148 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:510516/1‑149 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:788462/1‑149 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:2666520/1‑149 (MQ=255) ccGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGt < 2:2789985/149‑1 (MQ=255) gTTTGGGTAACCTTATTCGGCTCTACGCGACCAATTTGGCTGGTCAGGTTTTTCCGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGAt < 2:1724166/149‑1 (MQ=255) tAGGGTAACCTTATTCGGCTCTTCGCTACAAATTTGGCTGGTCAGGTTTGTCATAAAAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATgg < 2:198980/149‑1 (MQ=255) | TGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118359‑1118654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |