| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,708 | G→T | 9.6% | intergenic (‑25/+283) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,708 | 0 | G | T | 9.6% | 403.9 / 4.6 | 160 | intergenic (‑25/+283) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (72/62); new base T (4/21); total (76/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 162 total aligned reads displayed.
AGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGG > CP009273/2170562‑2170856 | aGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGAt > 1:3685825/1‑149 (MQ=255) ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑Tc < 1:424411/149‑1 (MQ=255) ggCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATT‑TGaa > 2:4016595/1‑149 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTGTTTGATTGTCaaat > 1:2540563/1‑148 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TTAAAata > 2:2492932/1‑149 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAata < 1:2253730/149‑1 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTAGATT‑TAaaaaaa > 2:1127027/1‑147 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAAtata < 2:1970254/149‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATaa < 2:2914655/149‑1 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAAt < 1:1260838/149‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGa < 2:28369/149‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGAGTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGaa > 2:2762961/1‑149 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAat < 2:2044585/149‑1 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TCAAAATATAATGAAaata > 2:3598388/1‑149 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TCAAAATATAAATAAattatt > 2:2747747/1‑149 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTg < 2:1278896/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGtt < 2:3113985/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGtt < 2:3114046/149‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGtttt < 1:1512915/149‑1 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTTTT‑TTTAAATAAAAAAAAAAAATTTTTTTTTat > 1:1088309/1‑148 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTaaa < 2:2464385/149‑1 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTaaa < 1:1106431/149‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TAAAAAAAAAATTAAAAAATTTTTTTTTAAat > 1:722282/1‑149 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTT‑TTAAAATATAATTAAATTATtttttttttttt > 2:3269935/1‑145 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATc < 2:4274109/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATc < 2:4274168/149‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCga < 2:1884648/149‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAATATAAATAAATTATTTTTTTTTAAATATagag > 2:1931632/1‑149 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TAAAAAAATAATTAAATTATTTTTTTTTAAATATCgag > 2:1931728/1‑149 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TAAAAATATAATTAAATTATTTTTTTTTTAatatatata > 1:2753608/1‑144 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TAAAAATATAATTAAAATATTTTTTTTTTAATATAgag‑a > 1:342849/1‑149 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑At < 1:2486291/149‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑At < 1:330282/149‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATT‑TAAAAAAAAAAATAAAAAATTTTTTTTTTTATATAgag‑ag > 1:3337707/1‑148 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGTTTTTTGATT‑TTAAAATATAATTTAAATATTTTTTTTTTAataaaattat > 1:3339543/1‑142 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATaa < 1:3191879/149‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATaa < 2:2917125/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAAc < 1:2219526/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAAc < 1:2219365/149‑1 (MQ=255) tgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACg < 2:1064511/149‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGTATT‑TAAAAAAATAATGAAATTATTTTTTTTTTAATATAGAG‑ATAAcca > 2:810570/1‑147 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGa > 2:2449120/1‑149 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTATT‑TGAAAATATAAAGTAAATAATTTTTTTTTAATATATTG‑ATAAAGAta > 1:3450486/1‑148 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATca < 1:11132/149‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATca < 2:1172477/149‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATca < 2:1172629/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATcac < 1:1759839/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATcac < 2:3617494/149‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TCAAAAAATAAAGAAAATATTTTTTTTTAAATATAGAG‑ATAACGATCACaaaaaa > 2:3387954/1‑148 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATT‑TGAAAAAATAAAGAAAATATTTTTTTTTTAATATAGAG‑ATAACCATAACaaaaaa > 2:3392954/1‑148 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATT‑TCAAAATATTATTAAATTTTTTTTTTTTTTATATAGAG‑ATAAAGATCACAAAAAc > 2:2121194/1‑149 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTTTTTTGGATT‑TGAAAAAATAAATTAATTATTTTTTTTTTAATATAGTG‑AGTAAGATCACaaacaag > 1:940971/1‑145 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATT‑TCAAAAAATAATTAAATTATTTTTTTTTTAATATCGAG‑ATAACCATCACAAAAacaaca > 2:4189658/1‑149 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATT‑TCAAAAAAAAATTTAAATATTTTTTTTTTAATATAGAT‑GTAAAGATAACaaaaaacaaa > 1:4311868/1‑144 (MQ=255) aCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TAAAAATATAATGAAAATATTTGTTTTTAAATATAGAG‑ATAAAGATAACAAAAACGACAata > 2:962829/1‑149 (MQ=255) ccGAATAACCGCCGCGGTTTGCGTTTTTCAGCATAGGCTTTGTCTATACCACGTACATTTTCATATCCTTTCTTTTGTTTTCTTTT‑TAAAAATATAATTAAATTATTTTTTTTTAAATATCTAT‑ATAACTATCACAAACACGACAatat < 2:3839012/149‑1 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TGAAAATATAATTTAATTATTTTTTTTTTAATATAGAG‑ATAACAATAAAAAAAACAACAATATTaaa > 2:964104/1‑149 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TAAAAAAATAATGAAATTATTTTTTTTTAAATATAGAT‑ATAAAGAAAAACAAAAAGACAATATGTAAat > 2:584932/1‑149 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATT‑TAAAAAAATAATGAAATTATTTTTTTTTAAATATGGAG‑ATAACTATCACAAAAACGACAAAATTAAAat > 2:2741543/1‑149 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGATTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTTTTTTTAAATATCGAG‑ATAACTATCACAAAAACGACAATATGAAAatta < 2:2371755/149‑1 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCGGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAatta < 2:2372225/149‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATT‑TCAAAATATAATTAAATTTTTTTTTTTTTAATATAGAG‑ATAACGAACAAAAAAACGAAAAAATGAAAaataat > 2:969051/1‑147 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATT‑TAAAAAAAAAAATAAAATATTTTTTTTTTAATAAAGAG‑AAAACGAGAAAAAAAAACAAAAAATTAAAaatatt > 2:457245/1‑149 (MQ=255) cTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACGTACATTTTAATATCCTGTCTTTTGTTTTCGATT‑TCAAAATATAATTAAATTATTTTTTTTTAAATATCGAT‑ATAACGATCACAAAAACGACAATATGAAAATTATTCgagga < 2:1966972/149‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAAAATAAATAAAATAATTTTTTTTAAATATAGAG‑ATAAAGAAAACAAAAAACACAAAATTAAAAATAATAgatgag > 2:4153619/1‑149 (MQ=255) ggtgCGTTGTTCAGAATCTGTTTGGTCGATACCACGAACATTTTCATATCCGGTCTTTTGTTTGCCATT‑AAAAAATATAATTAAATTATTTTTTTTAAAATATCGAT‑AAAACGATCACAAAAACGACAATATGAAAATTATTCgaggag < 2:35659/148‑1 (MQ=255) tgCGTTGTTCAGCTTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCTATT‑ACAAAATATAATCAAATTATTTTTTTTTAAATATCGAG‑ATAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTg < 1:1732094/149‑1 (MQ=255) gCGTTGTTCAGCATCTGCTTTGTCTATCCCACGAAAATTTTATTATCCTGTCTTTTTTTTTCTTTT‑TAAAATTATAATGAATTTTTTTTTTTTTAAATATCGAG‑ATAACTACCACAACCACGACAATATGAAAATTATTCGAGGAGTGa < 1:924517/149‑1 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTT‑TTAAAAAATAAATTAAATATTTTTTTTTTAATAAATAT‑ATAAAAAAAAAAAAAAACACAAAATAAAAATTAATAGATTGGTGAAAGGaaaaaa > 1:91770/1‑149 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATT‑TAAAAAAAAAAATAAATTATTTTTTTTTTAATAAAGAGAAAAACAAAAAAAAAAACAAAAAAAT‑AAAAATATTCGTGGAGTGAAAGGGcaaaaaa > 1:2829973/1‑149 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAAAAAAAATTAATTATTTTTTTTTAAATATAGAG‑ATTAACATAACAAAAAAGAAAATATTAAAATTATTAGAGGAGTGAAAGGCaaaaaaaa > 2:4322415/1‑148 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTTAAT‑TAAAAAAAAAAATAAAAAATTTTTTTTTAAAAAAATAT‑ATAAAGAAAAAAAAAAACAAAAAATTAAAAATATAAGAGGGGTTAAAGGCaaaaaaaa > 1:4170629/1‑148 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATT‑TCAAAATATAATTAAATTATTTGTTTTTAAATATCGAG‑ATAACGATAAAAAAAAAGAAAAAAATAAAAATATTTGGTGGGTGGAAGTCaataaaaa > 2:3105588/1‑148 (MQ=255) tGTCTATACCACTTAATTTTTAATATCTTGTCTTTTTTTTTCTATT‑TAAAATTATAATGAATTTTTTTGTTTTTAATTATCGAT‑ATAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTcc < 1:2141464/149‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATTTTATTAAATTTTTTTTTTTTAAATTTAGAG‑ATTACGCTGACCAAAAAGACAAAATTAAAATTATTGGGGGGGTGTAATGCAAAAAAAAGGCCTCCCGag > 2:2048851/1‑148 (MQ=255) tACCACTTACATTTAAATATCCGTTCTTTTGTTTTCTATT‑AAAAAATATAATCAAATTATTTTTTTTTAAATATCGAG‑ATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAg < 2:1463522/149‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TTAAAATATAATGTAATTATTTGTTTTTATATATAGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTGGAGGTGTGAAATGCAAAATAAAGGCCTCCCGATAg > 2:1374343/1‑149 (MQ=255) ccACGTACATTTTACTATCCTGTCGTTTTTTTTCTATT‑TCAAAATATAATTAATTTTTTTGTTTTTAATTATCGAG‑ATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAggg < 1:305655/149‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTAGCTT‑TCAAAAAATAATGTAATTATTTTTTTTTAAATATAGAG‑ATAACGAACAAAAAAAAGACAAAAATAAAATTATTCGGGGCGTGATAGGCAAAAAAACGGCCGCCCCAGAGGGAAGCCgga > 2:4251543/1‑147 (MQ=255) ttttCATATCCTGTGGTTTGTTTTCTATT‑AAAAAATATAATTAAATTTTTTTTTTTTAAATATCGTT‑ATAACGACAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 1:2678315/149‑1 (MQ=255) tCATATCCTTTCTTTTTTTTTCTTTT‑AAAAAATATAATTAAATTTTTTTTTTTTAAATATCGAT‑ATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 1:3956222/149‑1 (MQ=255) aatatCCTGTCGTTTTTTTTCTTTT‑TAAAATTATAATTAAATTATTTTTTTTTAAATATCGAG‑ATACCGACCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 1:2325720/148‑1 (MQ=255) atttCCTGTGTTTTTTTTTCTTTT‑AAAAATTATAATTAATTTTTTTTTTTTTAATTTTCGAT‑AAACCCATAAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAg < 1:1480794/146‑1 (MQ=255) tatCCTGCCGTTTTTTTTCTATT‑AAAAAATATAATGAAATTATTTTTTTTTAAATATCGAG‑ATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGt < 2:3073451/149‑1 (MQ=255) tCCTGTCGTTTGTTTTCTATT‑TCAAAATATAATTAAATTATTTTTTTTTAAATATCGAG‑ATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgc < 1:3208833/149‑1 (MQ=255) cTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAAATATTTGTTTTTAAATATAGAG‑ATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGGGTGAAAGGCCAAAAAAAGGCCGCCCCATAGGGAAGCCGTAGCCAAGTgcgc > 2:2517611/1‑149 (MQ=255) cttttgtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:2521199/147‑1 (MQ=255) cGTTTTTTTTCTATT‑ACAAAATATAATTAAATTATTTTTTTTTAAATATCGAG‑ATAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 1:2461687/149‑1 (MQ=255) tttttttttCTATT‑ACAAAATATAATGAAATTTTTTTTTTTTAAATATCTAT‑ATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt < 1:1322290/148‑1 (MQ=255) tttgtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:467750/1‑149 (MQ=255) tttgtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:3854272/1‑149 (MQ=255) tttttaCGATT‑ACAAAATAAAATGAAATTTTTTGTTTTTAAATATCTAT‑ATAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:3105699/147‑1 (MQ=255) tgtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt > 2:3947456/1‑149 (MQ=255) gtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:2439227/1‑149 (MQ=255) tttCGATT‑TCAAATTATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg < 2:137591/149‑1 (MQ=255) tttCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:2374873/1‑149 (MQ=255) ttCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGCTCGGGAAGCCGTAGCAACGTGCGCGTGTTTTTATGc > 2:3717430/1‑149 (MQ=255) tCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:3934663/1‑149 (MQ=255) gATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATTACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:701331/1‑149 (MQ=255) gATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:700814/1‑149 (MQ=255) | AGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAG‑ATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGG > CP009273/2170562‑2170856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |