| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,713 | C→A | 28.9% | intergenic (‑30/+278) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,713 | 0 | C | A | 28.9% | 287.1 / 27.5 | 164 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (34/69); new base A (30/16); total (79/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 170 total aligned reads displayed.
TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCG > CP009273/2170565‑2170861 | ggCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATT‑TGaa > 2:4016595/1‑149 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCaaaa < 1:921284/149‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCaaaa < 2:2016812/149‑1 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTGTTTGATTGTCaaat > 1:2540563/1‑148 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAata < 1:2253730/149‑1 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTAGATT‑TAaaaaaa > 2:1127027/1‑147 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAatat < 1:1276922/149‑1 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAAtata < 2:1970254/149‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATaa < 2:2914655/149‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATg < 2:2587994/149‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATg < 2:4261948/149‑1 (MQ=255) gcgaccaccCCGTGCATCGCGTCGCGCTTGTGACGAGTGCCGGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTGTGTCGATACCACGTCCATTTTCAGATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGa < 2:2186478/146‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGAGTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGaa > 2:2762961/1‑149 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGaaa < 2:4201960/149‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAat > 2:2772474/1‑149 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TCAAAATATAATGAAaata > 2:3598388/1‑149 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAAAAAaattaaatta > 1:3215125/1‑149 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TAAAAATAAAAAGAAattaat > 2:342245/1‑147 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TCAAAATATAAATAAattatt > 2:2747747/1‑149 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTGTTT‑TATAAAAAAAAATAAAATAtttt > 1:2938330/1‑148 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGtt < 2:3114046/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGtt < 2:3113985/149‑1 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTTTT‑TTTAAATAAAAAAAAAAAATTTTTTTTTat > 1:1088309/1‑148 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTaaa < 2:2464385/149‑1 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTaaa < 1:1106431/149‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TAAAAAAAAAATTAAAAAATTTTTTTTTAAat > 1:722282/1‑149 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTT‑TTAAAATATAATTAAATTATtttttttttttt > 2:3269935/1‑145 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAatat < 1:1525681/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATc < 2:4274168/149‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCga < 2:1884648/149‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAATATAAATAAATTATTTTTTTTTAAATATagag > 2:1931632/1‑149 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAAAATAATTAAAATAATTTTTTTTAAATATAgaga > 1:2499666/1‑149 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGAt < 2:2487840/149‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTGGTTTTTGATT‑TAAAAAAATAATTAAAATATTTTTTTTTTAAAATagagtt > 1:3337635/1‑147 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGTTTTTTGATT‑TTAAAATATAATTTAAATATTTTTTTTTTAataaaattat > 1:3339543/1‑142 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATa < 1:445387/149‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATaa < 2:2917125/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:2219365/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:2219526/149‑1 (MQ=255) tgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACg < 2:1064511/149‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGTATT‑TAAAAAAATAATGAAATTATTTTTTTTTTAATATAGAGATAAcca > 2:810570/1‑147 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAAGa > 2:2447601/1‑149 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTATT‑TGAAAATATAAAGTAAATAATTTTTTTTTAATATATTGATAAAGAta > 1:3450486/1‑148 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:11132/149‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 2:1172629/149‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 2:1172477/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac < 2:631525/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac < 2:3617494/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac < 1:1759839/149‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TCAAAAAATAAAGAAAATATTTTTTTTTAAATATAGAGATAACGATCACaaaaaa > 2:3387954/1‑148 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTTTTTTGGATT‑TGAAAAAATAAATTAATTATTTTTTTTTTAATATAGTGAGTAAGATCACaaacaag > 1:940971/1‑145 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATT‑TAAAAATATAATGAAATTATTTTTTTTTTAATATAGAGATTACGCTCACaaaaaaaaca > 2:86438/1‑144 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTT‑TCAAAAAAAAATTAAATTATTTTTTTTTTAATATAGAGTTTAAGATCACaaaaaaaaaa > 1:334495/1‑144 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATT‑TCAAAAAAAAATTTAAATATTTTTTTTTTAATATAGATGTAAAGATAACaaaaaacaaa > 1:4311868/1‑144 (MQ=255) ccGAATAACCGCCGCGGTTTGCGTTTTTCAGCATAGGCTTTGTCTATACCACGTACATTTTCATATCCTTTCTTTTGTTTTCTTTT‑TAAAAATATAATTAAATTATTTTTTTTTAAATATCTATATAACTATCACAAACACGACAatat < 2:3839012/149‑1 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TGAAAATATAATTTAATTATTTTTTTTTTAATATAGAGATAACAATAAAAAAAACAACAATATTaaa > 2:964104/1‑149 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATT‑TAAAAAAATAATGAAATTATTTTTTTTTAAATATAGATATAAAGAAAAACAAAAAGACAATATGTAAat > 2:584932/1‑149 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TCAAAATATAAATAAATTATTTTTTTTTTAATATATTGATAAAGATCAAAAAAAATACAATATGAAAat > 1:4220178/1‑149 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGATTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAatta < 2:2371755/149‑1 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATT‑TTAAAAAAAAAATTAAAAATTTTTTTTTTTATTTATAGAAAAAGATCACAAAAAACACAAAAAGAAAaataa > 1:3703416/1‑148 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TAAAAAAATAAATTAAATATTTTTTTTTAAATATAGAGATAAAGAAAACAAAAAAGAAAATATTAAAaatatt > 2:455959/1‑149 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATT‑TCAAAATATAATTAAATTTTTTTTTTTTTAATATAGAGATAACGAACAAAAAAACGAAAAAATGAAAaataat > 2:969051/1‑147 (MQ=255) cTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACGTACATTTTAATATCCTGTCTTTTGTTTTCGATT‑TCAAAATATAATTAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCgagga < 2:1966972/149‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAATATAATGTAAATATTTTTTTTTAAATTTCGATATAAAGATCACAAAAAAGACAATATGTAAATTTTTCgaggtg > 2:4302721/1‑147 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATT‑TAAAAAAATAAATAAAATAATTTTTTTTAAATATAGAGATAAAGAAAACAAAAAACACAAAATTAAAAATAATAgatgag > 2:4153619/1‑149 (MQ=255) aGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATTAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaa < 2:2393109/149‑1 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTT‑TTAAAAAATAAATTAAATATTTTTTTTTTAATAAATATATAAAAAAAAAAAAAAACACAAAATAAAAATTAATAGATTGGTGAAAGGaaaaaa > 1:91770/1‑149 (MQ=255) tCTGCTTTGTCTATACCACGTAATTTTTAATATCCTGTCTTTTTTTTTCTATT‑TCAAAATATATTTAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:1516048/149‑1 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATT‑TCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATAAAAAAAAAGAAAAAAATAAAAATATTTGGTGGGTGGAAGTCaataaaaa > 2:3105588/1‑148 (MQ=255) tGTCTATACCACTTAATTTTTAATATCTTGTCTTTTTTTTTCTATT‑TAAAATTATAATGAATTTTTTTGTTTTTAATTATCGATATAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTcc < 1:2141464/149‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATTTTATTAAATTTTTTTTTTTTAAATTTAGAGATTACGCTGACCAAAAAGACAAAATTAAAATTATTGGGGGGGTGTAATGCAAAAAAAAGGCCTCCCGag > 2:2048851/1‑148 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TAAAAATATAATTTAATTATTTTTTTTTAAATATCGAGATAAAGATCACAAAAAAGACAATATTTAAATTATTAGAGGGGTGTAAGGCAAAAAAAATGCCTACCGAt > 2:2047715/1‑149 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATT‑TTAAAATATAATGTAATTATTTGTTTTTATATATAGAGATAACGATCACAAAAACGACAATATGAAAATTATTGGAGGTGTGAAATGCAAAATAAAGGCCTCCCGATAg > 2:1374343/1‑149 (MQ=255) aCCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTT‑TGAAAAAATAATGTAATTATTTGTTTTTTAATATAGAGATAACGATCACAAAAAAGACAATATGTAAATTATTGTTGGAGTGTAAGGCAAAAAAAAGGCCACCCGCTAgg > 2:1333023/1‑149 (MQ=255) ccACGTACATTTTACTATCCTGTCGTTTTTTTTCTATT‑TCAAAATATAATTAATTTTTTTGTTTTTAATTATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAggg < 1:305655/149‑1 (MQ=255) gtaatttttAATATCCTGTTTTTTGTTTTCTATT‑AAAAAATATACTTAATTTTTTTTTTTTTAAATATCGATATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 1:2772474/144‑1 (MQ=255) gTACATTTTCATTTCCTGTCGTTTGTTTTCTATT‑TCAAAATATAATGAAATTATTTTTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGc < 2:3685825/149‑1 (MQ=255) ttttCATATCCTGTGGTTTGTTTTCTATT‑AAAAAATATAATTAAATTTTTTTTTTTTAAATATCGTTATAACGACAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 1:2678315/149‑1 (MQ=255) tCATATCCTTTCTTTTTTTTTCTTTT‑AAAAAATATAATTAAATTTTTTTTTTTTAAATATCGATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 1:3956222/149‑1 (MQ=255) aatatCCTGTCGTTTTTTTTCTTTT‑TAAAATTATAATTAAATTATTTTTTTTTAAATATCGAGATACCGACCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 1:2325720/148‑1 (MQ=255) atttCCTGTGTTTTTTTTTCTTTT‑AAAAATTATAATTAATTTTTTTTTTTTTAATTTTCGATAAACCCATAAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAg < 1:1480794/146‑1 (MQ=255) aacccTGTCTTTTGTTTTCTATT‑ACAAAATATAATGAAATTTTTTTTTTTTAAATATCGAGATAACTATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGt < 2:3073358/146‑1 (MQ=255) tCCTGTCGTTTGTTTTCTATT‑TCAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgc < 1:3208833/149‑1 (MQ=255) cTGTCGTTTTTTTTAGATT‑TCAAAAAATAATGAAAATATTTTTTTTTAAATATAGAGATAAAGATAACAAAAAAAAAAATATTAAAAATATTAGAGGAGTGAAATGCAAAAAAAAAGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc > 2:2517590/1‑149 (MQ=255) cttttgtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:2521199/147‑1 (MQ=255) cGTTTTTTTTCTATT‑ACAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 1:2461687/149‑1 (MQ=255) tttttttttCTATT‑ACAAAATATAATGAAATTTTTTTTTTTTAAATATCTATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt < 1:1322290/148‑1 (MQ=255) tgtttTCGATT‑TCAAAATATAATGAAATTTTTTGTTTTTAAATATCTAGATAACTAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:3105867/149‑1 (MQ=255) tgtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAACGGGCGCGTGttttt > 2:3947147/1‑149 (MQ=255) gtttTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 1:414599/1‑149 (MQ=255) tttCGATT‑TCAAATTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg < 2:137591/149‑1 (MQ=255) tttCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:2374873/1‑149 (MQ=255) tCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:3934663/1‑149 (MQ=255) gATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATTACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:701331/1‑149 (MQ=255) tt‑tAAAAATTTAATTAAATTATTTGTTTTTAAATATCGTTATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 2:2105615/149‑1 (MQ=255) t‑tCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAATAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 2:2922330/1‑149 (MQ=255) tacAAAATATAATTAATTTTTTTTTTTTTAAATATCTATATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 2:415503/147‑1 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:3384852/1‑149 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 1:1682364/1‑149 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGGGTTTTTATGCCGGATGCg > 2:1934054/1‑149 (MQ=255) | TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATT‑TCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCG > CP009273/2170565‑2170861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |