| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,263,502 | C→T | 8.4% | intergenic (+541/+73) | yhaC → / ← rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,263,502 | 0 | C | T | 8.4% | 348.4 / 17.2 | 145 | intergenic (+541/+73) | yhaC/rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| Reads supporting (aligned to +/- strand): ref base C (88/39); new base T (3/9); total (93/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 151 total aligned reads displayed.
ACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAA > CP009273/3263356‑3263650 | aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgt < 2:2923115/149‑1 (MQ=37)aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgt < 1:3941478/149‑1 (MQ=37) aTAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAATCCCCGTTATTTTGGGTATAGCGTCGTGGACa > 1:4320140/1‑149 (MQ=11) tAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAg < 1:1023856/149‑1 (MQ=37) tAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAg < 1:3664047/149‑1 (MQ=37) aGCCGCATTCTTGTTCGTTTTGTGTCGTGGAAAGTCTCTACTATTTCGGCCCCTCAAAAAGCTTAAACCCGCCGTAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtc < 2:2332067/149‑1 (MQ=11) gCCGCGTTCTTTTGGGTATAGTGTCGTGGACAGTCAATCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACAGACCCATAAGCCGGTGTCTGTGGGGGAGAGAGACGAGGACAGtcc > 2:3314206/1‑148 (MQ=11) ctttctttTGGGTAGAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtcattca < 2:3658728/149‑1 (MQ=37) cattctttTTGGTTTAGTGTCGTCGACAGTCTTTAATCTTACTGCCACTCCAAAATCAAAAACCCGCCGAAGCGGTTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtcattca < 2:3658686/147‑1 (MQ=11) ttctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCGTTTGGGTATAGCGTCGTGTACAGtccataatc > 2:1829816/1‑142 (MQ=11) tctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAACAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCt < 1:510142/149‑1 (MQ=37) ctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCtt < 1:40331/149‑1 (MQ=37) ttttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCACCAAAAGCAAAAACCCGCCCAAGCGGGTTTTTACGTAAACCAGGTGAAACAGACCGATAAGCCGCTTTCTTTTGGGTAAAGCGACGAGGACAGtcaatcaacatt > 2:3605030/1‑144 (MQ=11) tgtGGGGATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCACAAGAAAAAACCCGCCGTAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTc < 2:2859138/147‑1 (MQ=255) ttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCt < 1:3611319/149‑1 (MQ=37) ttGGGTATAGTGTCGTGGACAGTCATTCAACTTTCTGCCCCACCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAAATGAACCAAAAGCCGCTTTATTTTGGGTAAATCGACCTGGAAAGtcaatcaacattaa > 2:1603712/1‑142 (MQ=11) tCGTTGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaaa < 2:1949561/149‑1 (MQ=17) tCGTGGCCAGTCATTCATCTTTATGCCCCTCCACAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaaa < 2:2529169/149‑1 (MQ=255) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGTTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaaa < 2:1950191/149‑1 (MQ=37) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGAGGACAGTCAATCATATTTCTGCCCCACCAAAAGCAAAAAcc > 2:1188763/1‑149 (MQ=255) attcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgc > 2:4019616/1‑149 (MQ=37) ttcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTGGGGCCCGCCAAAAGCAAATACccgcc > 2:2576579/1‑149 (MQ=11) tCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCggg < 1:3017928/149‑1 (MQ=37) cccTCCCACCGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATCAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTGTCTGCCCCGCCCAAAGCAAAAACCCGCCGAAGCGGGttttt < 2:3079456/149‑1 (MQ=11) cccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGttttt < 2:3079486/149‑1 (MQ=37) cccTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCGTTCGTTTGGGTCTAGCGGCGTGGACAGTCATTCATCGTTCTGCCCCGCCAACAGCAAAAACCCGCCGAAGCGGGgtttt > 1:2880926/1‑149 (MQ=11) ccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTATGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTa > 2:2690681/1‑149 (MQ=255) cAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTTCGTa > 2:2014994/1‑149 (MQ=255) aaacaaaaaaCCCGCCGAAGCGGGTTTTGACGTCAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTaaa < 2:1856607/144‑1 (MQ=255) aaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTCTAGCGTCGTGGGCAGTCATTCATCTTTCTGCCCCTCCCAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGGaaa > 2:1092435/1‑149 (MQ=11) aaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACCGTCATTAAACTTTATGCCCCGCCCAAAGCAAAAACCCGCCGAAGCGGGTGTTTACGGaaa > 2:739780/1‑149 (MQ=11) agtaaaaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATc < 1:1878795/146‑1 (MQ=18) aaaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGt > 2:3416635/1‑149 (MQ=37) ccgccgTAGCGGGTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAAc < 2:3044162/149‑1 (MQ=12) ccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACAGa > 2:2311768/1‑149 (MQ=37) ccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCCCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGa > 2:2312008/1‑149 (MQ=37) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCg < 1:2230322/149‑1 (MQ=37) atcGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGAAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa < 1:1871597/147‑1 (MQ=255) aGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGAAAAAAACAGCCGAAGCGGGTTTTTACGTAAATAAGGTGAAACTGACCGa > 2:144555/1‑149 (MQ=11) gCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTACTTCATCTTTCTGCCCCCCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATAAGGTGTTAATGACCgtt > 1:3757569/1‑147 (MQ=11) cGGGTTTTTACGTATAACAGCTGACTCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATa < 1:2994634/149‑1 (MQ=11) gggTTTTTTCGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgc < 1:568564/107‑1 (MQ=25) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgc > 2:568564/1‑107 (MQ=35) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAAATGACCGATaa > 2:3815796/1‑149 (MQ=37) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGGCATTCATCTTTCTGCCCCGCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACCTAAAACAGGTGAAACTGACCGATaac > 1:2309980/1‑148 (MQ=11) tttttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTGTGGGTATAGCGTCGGGGCCAGGCATTCATCGTTCTGCCCCGCCAAAAGCAAAAACCCGCCGCAGCGGGGGTTTACGTAAATCAGGTGAAACTGACCGGTAAGcc > 1:1950231/1‑149 (MQ=11) ttttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATAAGGTGAAACTGACCGATAATCCg > 1:1375080/1‑149 (MQ=255) ttttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACACTCATTCATCTTTATGCCCCTCCAAAATCAAAAAAACGCAGCAGCGGGTTTTTACGTAAATAAGGTGAAACTGAACTATaatacg > 1:3554611/1‑145 (MQ=11) cattACGTACACCAGGTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCTTCTTTCTGCCCCCCCAAACGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCg < 1:205442/147‑1 (MQ=11) tttACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCgg < 1:1170614/149‑1 (MQ=17) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTCTAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAACAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt < 2:2142414/149‑1 (MQ=255) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATGTTTCTGCCCCTCCAAATTCAAAAACCCGCCGGAGCGGGTTTTTTCGTAAATCAGGTGAAACTGACCGATTAGCGGGGttgt > 2:3587600/1‑147 (MQ=14) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt > 1:1744261/1‑149 (MQ=255) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCGTTCTGCCCCTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt > 1:1745599/1‑149 (MQ=255) tAAACCAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGGTTTACGTAAATCAGGTGAAACAGACCGATCAGCCGGGTTCTg > 2:3523762/1‑149 (MQ=14) aaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACACTCATTCATCTTTCTGCCCCGCCCAAAGCAAAAACCCGCCGAACCGGGTTTTTTCGTAAATCAGGTGAAACTGACCGAAAAACCGGGTTCTGTc > 1:3513798/1‑149 (MQ=14) aCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg > 2:1679044/1‑149 (MQ=255) aCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg > 2:1676942/1‑149 (MQ=255) aCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATAATTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGTAAAAAAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg > 2:728779/1‑149 (MQ=14) tcAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGGAAAAACCCGCCGAAGCGGGTTTTTACGTAAATAAGGTGGTACTGACCGATAAGCCGGGTTCTGttgg > 2:468902/2‑146 (MQ=11) ccAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCCCCGAAGCGGGGTTTTACGTAAATCAGGTGAAACAGACCGATAAGCCGGGTTCTGGCGt > 1:4226986/1‑149 (MQ=14) aGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCCGTGATTAAAATTTATGCCCCGCCAAAAGCAAAAAACCCCCCAACCGGGTTTTTAAGTAAATCAGGTGAAAAAGTCCGATAAGCCGGGTTCTGTCGTgg > 1:95859/1‑149 (MQ=14) ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAATCAGGTGAAACTGAACGATAAGCCGGGTTCTGTCGTGGa > 2:2968650/1‑149 (MQ=255) ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCAGGGTTCTGTCGTGGa > 2:3867132/1‑149 (MQ=255) gTGAAACTGACCGATAAGCCGCTTTCTATTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 1:335946/149‑1 (MQ=255) aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGt < 1:465091/149‑1 (MQ=255) aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtc < 1:1423683/149‑1 (MQ=255) aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaaa < 1:2730876/72‑1 (MQ=34) aaCTGACCGATAAGCCGCTTTCGTTTGGGTATAGAGTCGTGGACCGTCATTCATCTTTCTGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGTAACTGACCGATTAGCCGGGGTCTGTGGTGGagagcg > 2:120090/1‑147 (MQ=11) aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtca > 1:2849949/1‑149 (MQ=255) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt < 1:2848865/149‑1 (MQ=255) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt > 2:2055995/1‑149 (MQ=255) gACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGAAAATCCGGGTTCTGTCTTGTACAGtgatta > 2:3168076/1‑148 (MQ=14) aCCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGTAAATAAGGTGAAACTTACCGATAAGCCGGGTTCTTTCGTGGACAGtcattca > 1:4219014/1‑149 (MQ=255) ccGATAAGCCGCTTTCTTTTGGGTATATAGTCGTTGACAGACACTCATCTTCCTGCCCCTCCAATCGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattcat < 2:598747/149‑1 (MQ=17) gATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAATCAAAAAACCCCCGAAACGGGTTTTTAAGTAAATAAGGTGTAAAAGAACCATAAGCCGGGTTCTGTCGTGGACAGtcattaatat > 1:2669723/1‑147 (MQ=17) gATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGGGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt > 1:325905/1‑149 (MQ=255) aaGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTAATTCATCTTTCTGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAAAAGACCCATAATCCGGGTTCTGTCGTGGACAGTCATTCAACTAgg > 2:437141/1‑149 (MQ=17) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGTCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTAATCTAGGc > 2:1303359/1‑149 (MQ=255) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTTAATCAGGTGAAACTGACCGTTAATGCGGGTTCTGTCGTGGACGGGGATTCATCTAggg > 2:424536/1‑148 (MQ=17) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTAATTAATCTTTATGCCCCACCCAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATAAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACCGTCATTCATCTAggg > 2:424533/1‑148 (MQ=17) ccGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCa < 1:3499611/149‑1 (MQ=255) cGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGt < 1:1334631/118‑1 (MQ=17) gCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGc > 1:1386914/1‑149 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAATCAAAAACCCGCCGACGCGGGTTTTTAAGTAAATCATGTGAAACTGACCGATAAGGCGGGTTGTGTCGTGGACGGTCATTCATCTAGGCCCGc > 2:828166/1‑149 (MQ=17) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGc > 1:664626/1‑149 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACAGACCGATAATCCGGGTTCTTTCGTGGACAGTCATTCATCTAGGCCAGc > 1:3566524/1‑149 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATCTTTATGCCCCTCCAAAATCAAAAAACCCCCGAAGCGGGTTTTTAAGTAAATAAGGTGAAAAAGACCGAAAATCCGGGGTCTGTCGTTGAAAGTCATTCATCTAGGCCAGc > 1:4090378/1‑149 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATAATCTTTCAGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAAAAGACCGATAATCCGGGTTCTGTCGTGGACAGTCATTAATCAAGGCCAGc > 1:4090381/1‑149 (MQ=18) ctttctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCa < 1:1012971/149‑1 (MQ=255) ttctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAAt < 2:2171846/149‑1 (MQ=255) gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCAc < 2:4027692/149‑1 (MQ=255) gggTATAGCGTCGTGGACAGTCATTCATCTTTCAGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTATGTCGTGGACAGTCAATAATCTATGCCAGCAAACGCTCAc > 1:3177570/1‑149 (MQ=18) gTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTg < 1:1188763/149‑1 (MQ=255) tataGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTgg < 1:3605030/149‑1 (MQ=255) ataGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGc > 2:2617784/1‑149 (MQ=255) taGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTTACCGATAAGCCGGGTTATGTAGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTTGCt > 1:616732/1‑149 (MQ=21) aGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACCGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTc > 2:647127/1‑149 (MQ=255) aGCGTCGTGGACAGTCATTCATCTTTCTGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTc > 2:647356/1‑149 (MQ=255) cgtcgtGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCaa < 2:2474590/149‑1 (MQ=255) | ACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAA > CP009273/3263356‑3263650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |