| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,871,017 | A→T | 6.7% | intergenic (‑192/+48) | yidB ← / ← gyrB | DUF937 family protein/DNA gyrase, subunit B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,871,017 | 0 | A | T | 6.7% | 685.8 / 2.6 | 218 | intergenic (‑192/+48) | yidB/gyrB | DUF937 family protein/DNA gyrase, subunit B |
| Reads supporting (aligned to +/- strand): ref base A (106/90); new base T (2/20); total (108/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.60e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 227 total aligned reads displayed.
GATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAG > CP009273/3870869‑3871165 | gATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACATCATGAAAATTCAATACATTGCAAGATTTTCGTa < 2:4135600/149‑1 (MQ=255)gATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTAAATACATTGCAAGATTTTCGTa > 1:447796/1‑149 (MQ=255) tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAgg < 2:1456022/149‑1 (MQ=255) tGCGGGATGATAAGTGCGGATAGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGcc < 1:2963614/149‑1 (MQ=255) cGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTg < 1:1070106/149‑1 (MQ=255) ggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAAAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGAt > 1:1470909/1‑149 (MQ=255) atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCg > 2:3119681/1‑149 (MQ=255) atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCg < 1:3820117/149‑1 (MQ=255) aaTTGCGGATTGCAGAACTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGCACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATCCATTGCAAGATTTTCGTAGGCCTGATAAGCGTa < 2:4223142/149‑1 (MQ=255) aaTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATTCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTTGGCCTGATAAGCGTa > 2:173391/1‑149 (MQ=255) gCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgcgc > 1:4299566/1‑149 (MQ=255) cGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCa < 1:3907368/149‑1 (MQ=255) ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAGTGCAAGATTTTCGTAGGCCTGATCAGCGTAGCGCAt > 2:2773621/1‑149 (MQ=255) ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACAAAATCATGAAAATTAAATACATTGCAAGATTTTCGTAGGCCGGATAAGCGTAGCGCAt > 1:837580/1‑149 (MQ=255) ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCATTTTCTTATAGATTCTTGCCGGATGCGGAGTGAACGCCTAATCCGGCCTACACAATCATGAAAATTCAATACATTGCAAGATTATCGTAGGCCTGATAAGCGTAgcgcct > 2:2773436/1‑147 (MQ=25) cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 2:2235441/149‑1 (MQ=255) cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 1:2433529/149‑1 (MQ=255) cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 2:1099515/149‑1 (MQ=255) aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAc < 2:563122/149‑1 (MQ=255) aaaTAAAACGGGCGGAGAGTATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGc < 1:4184352/149‑1 (MQ=255) aTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCGTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCGGATAAGCGGAGCGCAGCAGGCACGCTc > 1:1865288/1‑149 (MQ=255) acgggCGGAGAAGCTCTCCGCCCTTTTCTTATCGCTTCTGGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAGTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCAACAGGCACGCTCGCATg < 2:4203228/147‑1 (MQ=21) tgggCGGTGTTGATCTCCGCCCTTTTCTTATAGCTTGTGGCGGGTGGGGGCTTGAACGCCTTATCGGGCCAACAAACACATGAAAATTCAATACTTTGCATGTTTTTGGTAGGCCTGATATGGGTAGCGCAACCGGCACGCTCGCATgg < 2:1840741/148‑1 (MQ=255) aGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACAAAATAATGAAAATTCAATACATTTCAAGATTTTAGTAGGCCTGATAATCGTAGCGCATCAGGCACGCTCGCATgg > 1:1974527/1‑149 (MQ=25) gggCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCAGCAGGCACGCTCGCATGGt > 2:4230430/1‑149 (MQ=255) gggCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATAATGAAAATTAAATACATTTCAAGATTTTCGTAGGCCGGATAAGCGTAGCGCATCAGGCACGCTCGCATGGt > 1:482351/1‑149 (MQ=255) gggCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACAAAATCATGAAAATTCAATACATTGCAATATTTTCGTTGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGt > 1:1013239/1‑149 (MQ=255) tgctcaccGCCCTTTTCTTATAGCTTCGTGCCGGAGGCGGCGTGACCGCCTTATCCGGCCTACAAAAACCTCAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCTTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCAt < 2:3799978/143‑1 (MQ=21) tgatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGTTTTTCGTAGGCCTTATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCAt < 2:1964736/149‑1 (MQ=255) tctcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTaa > 2:811782/1‑149 (MQ=255) ctcCGCCCTTTTCTTTTAGCTTCTTGCCGGAGGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATACAATACATTGCAAGTTTTTGTTAGGCCTGTTAAGCGTAGCGAATCAGGCACGCTCGCATGGTTAGCGCCATTaaa < 1:1762664/149‑1 (MQ=25) tcCGCCCTTTTCTTATATCTTCTTGCCGGATTCGGAGTGAACGCCATATACGGCCTACAAAATCATGAAAATTAAATACAATGCAAGATTTTAGTAGGCCAGATAAGCGTATCGCATCATGCACGCTAGCAGGGTTATCTCCATTAAat > 2:2935050/1‑149 (MQ=255) tcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAat < 2:233552/149‑1 (MQ=255) tcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCAACAAAATCATGAAAAATAAATACATTGCAAGATTTTAGTATGCCTGATAAGCGTATCGCATCAGGCACGCTCGCAAGGTTAGCGCCATTAAat > 1:2198290/1‑149 (MQ=25) cTTTTCTTATAGCTTCTTGCCGGCTGCGGCGTGTACGCCATATACGGCCAACAAAATCATGAAAATTAAAAAAATTTCAAGAATTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCCCGCACGCATGGTTAGCGCCCTTAAATATAGat > 1:4005399/1‑149 (MQ=21) ttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAtt > 1:2107284/1‑149 (MQ=255) ttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTACCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAtt < 2:2572059/149‑1 (MQ=255) tataGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTAGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgcc > 1:289677/1‑149 (MQ=255) taGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTcgccgc < 2:1388976/149‑1 (MQ=255) aGCTTCTTGCCGTATGCGGCGTGAACGCCTTATCCGGCAAACAAAATAATTAAAATACAATACATTGCAAGATTTTCGTTGGCCTGATAAGCGTTGCGAATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCt < 1:4299046/149‑1 (MQ=25) aGCTTCTTGCCGGTTGGGGCGTGAACGCCTTATCCGGCCAACAAAATCATTAAAATTCAATACTTTGAATGTTTTTCGTAGGCCTTATAAGGGTAGCGAATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCt < 1:289385/149‑1 (MQ=25) aGCTTCTTGCCGGTTGCGGCGTTAACGCCTTATCCGGCCTACAAAATCATTAAAATTAAATACATTGAAAGATTTTCGTAGGCCTTATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCt < 2:1074801/149‑1 (MQ=25) gCTTCTTGCCGGATGCGGCGTGAACGCATTATCCGGCCTACAAAATCATTAAAATTAAATACATGGAAAGATTTTCTTTGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCtt < 1:2490490/149‑1 (MQ=25) cttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCttt > 1:915665/1‑149 (MQ=255) tttGCCGTTTGCGGCGTGAACGCCTTACCCGGCCTACAAAATCATTAAAATTAAATAAATTGCATTATTTTCGTAGGCCTTATAAGGGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAg < 1:585675/148‑1 (MQ=255) ttGCCGGTTGCGGCGTTACCGCCTTACCCGGAATAAAAAATAATTAAAATTCAATACATTGAAAGTTTTTCTTTGGCATTATACGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAgg < 1:1926176/149‑1 (MQ=255) ttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAgg > 1:2324808/1‑149 (MQ=255) tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAggg < 2:3834716/149‑1 (MQ=255) gcgggttGCGGCGTGAACGCTTTATCGGGCAAACAAAATCATGAAAATTAAATAAATTGCAATATTTTCGTTGGCCTTATACGCTTCGCGAATCCGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGc < 1:3132030/143‑1 (MQ=255) cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGt > 1:3202778/1‑149 (MQ=255) ggATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGtt > 2:299738/1‑149 (MQ=255) gttGCGGCGTGAACGCATTAGCCGGCCAACAAAATCATTAAAATTCAATCCATTGAAATATTTTCGTTGGCGTTATACGCTTAGCGCATCCGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtc < 1:948989/147‑1 (MQ=255) gATGCGGCGTGACCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTCGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtc < 2:2635603/149‑1 (MQ=255) gATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtc < 2:2054220/149‑1 (MQ=255) gATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtc > 2:3339674/1‑149 (MQ=255) cggcgTGACCGCCTTACCCGGCATACAAAATCATGAAAATTAAATACATTGAATGATTTTCTTAGGCCTTATAAGCGTAGCGAATCTGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCtt < 1:3937197/149‑1 (MQ=255) ggcgTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTc > 1:2824917/1‑149 (MQ=255) gcgTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCa > 1:3441956/1‑149 (MQ=255) gTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAAt < 2:582078/149‑1 (MQ=255) tGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATa > 2:365565/1‑149 (MQ=255) aaCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATaaa < 2:1356617/149‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCATGAAATTTCAATACATTGCAAGTTTTTCTTAGGCCTTTTAAGGGTAGCGAATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAAc < 2:2533321/149‑1 (MQ=38) aCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAAc > 1:2872900/1‑149 (MQ=255) cTTATCCGGCCTACAAAATCATTAAAATTAAATACATTGAAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCTGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCAc < 2:806147/149‑1 (MQ=255) aTCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGgc > 2:2890785/1‑149 (MQ=255) ccGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGgcgc > 1:3072511/1‑149 (MQ=255) ccGGCCTACAAAATCATGAAAATTCAATACATTGAAAGTTTTTCGTAGGCCTTTTAAGCGTAGCGAATCTGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGgcgc < 1:4261012/149‑1 (MQ=255) gCCTACAAACTCAGGAAAATTCAATACAGTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATGCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt < 2:2477104/149‑1 (MQ=255) gCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt < 2:590619/149‑1 (MQ=255) gCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt < 2:320767/149‑1 (MQ=255) ccTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGtt < 2:3538974/149‑1 (MQ=255) caaaaaaaaTCAAGAAAATAAAATACTTTGAAAGATTTTGGTTGGCCTTATAAGCGTAGCGAATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGtt < 1:3634396/144‑1 (MQ=255) cTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTc > 1:115217/1‑149 (MQ=255) aCAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCaa > 2:4049599/1‑149 (MQ=255) cAAAATCATTAAAATTCAATCCATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAAc < 2:4005302/149‑1 (MQ=255) aaaaaTCCTGAAAATTCAATACATTGAAAGTTTTTCGTAGGCCTTATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAAc < 2:1829404/148‑1 (MQ=255) tcatcaAAATTCAATACATTGCATTTTTTTCGTTGGCGTTATACGCGTAGCGCATCCGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGt < 1:123164/149‑1 (MQ=255) tCATTAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATACGCGTAGCGCAACAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGt < 2:3057217/149‑1 (MQ=255) aTGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTGTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCg > 2:9459/1‑149 (MQ=255) gAAAATTCAATACATTGCAAGATTTTCTTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGcc < 2:3197457/149‑1 (MQ=255) gAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGcc > 1:2133821/1‑149 (MQ=255) gAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGcc > 1:371381/1‑149 (MQ=255) aaaaTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGccc > 1:1406465/1‑149 (MQ=255) cAATACATTGCAAGATTTTGGTAGGCCTTATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGc < 1:3786375/149‑1 (MQ=255) cAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGc > 1:4225129/1‑149 (MQ=255) aaTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCg > 2:1164181/1‑149 (MQ=255) tACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtg > 1:3272181/1‑149 (MQ=255) aCATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtgg > 2:3917362/1‑149 (MQ=255) cATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggt < 2:2648707/149‑1 (MQ=255) aTTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCCCGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggtg > 2:3480319/1‑149 (MQ=255) ttGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGa > 2:3229424/1‑149 (MQ=255) tGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGAATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaa < 1:1592307/149‑1 (MQ=255) gCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaac > 2:1249181/1‑149 (MQ=255) cAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaaca > 2:4053895/1‑149 (MQ=255) aaGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaacaa > 1:2365716/1‑149 (MQ=255) gtttttCGTAGGCCTGATTCGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACt < 2:1665542/147‑1 (MQ=255) ttttCGTAGGCCTGATACGCGTAGCGCATCCGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTgg < 1:632337/149‑1 (MQ=255) ttttCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTgg > 2:4297560/1‑149 (MQ=255) tttCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGt < 2:1491617/149‑1 (MQ=255) tCGTTGGCCTGATACGCGTTGCGCATCCGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATACACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCg < 1:1520761/149‑1 (MQ=255) | GATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAG > CP009273/3870869‑3871165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |