Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 68,547 G→T 13.0% R237L (CGC→CTC)  yabI → DedA family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP00927368,5470GT13.0% 593.9 / 50.5 196R237L (CGC→CTC) yabIDedA family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (57/111);  new base T (15/10);  total (75/121)
Fisher's exact test for biased strand distribution p-value = 1.51e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 200 total aligned reads displayed.

TGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACG  >  CP009273/68400‑68696
                                                                                                                                                    |                                                                                                                                                     
tgtgGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGcc                                                                                                                                                     <  1:2389533/150‑1 (MQ=255)
 gtgGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCa                                                                                                                                                    <  1:3944575/150‑1 (MQ=255)
    ggTTGGTGGCTGGCTGTGCTGTCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCAccc                                                                                                                                                 <  2:2402659/150‑1 (MQ=255)
    ggTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCAccc                                                                                                                                                 >  2:3721190/1‑150 (MQ=255)
      ttGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGTCGCCCTTGTTTTATTCCCACGGCGTGGTGGGGCTGGTGGTGTTTATTATCCAcccca                                                                                                                                               >  1:3698946/1‑148 (MQ=255)
       tggtggCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGGTGTCGCCGTTGATTTATTCCCACGGCGGGGTGGGGCTGGGGGGGTTTATTAGCCAccccga                                                                                                                                              >  1:4383830/1‑147 (MQ=255)
        ggtggCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTg                                                                                                                                             <  1:567779/150‑1 (MQ=255)
        ggtggCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTg                                                                                                                                             <  1:2577274/150‑1 (MQ=255)
         gtggCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTTGCTGAAGCCGTTTATTTCTGCCATCGGCGTTGTGGCGCTGGTGGTGTTAATTAGCCACCCGttta                                                                                                                                            >  2:1494271/1‑148 (MQ=255)
         gtggCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGa                                                                                                                                            <  2:2244291/150‑1 (MQ=255)
         gtggCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTGTGTTGTGGCTGACGCCGTTGATTTCTTCCATCGGCGTGGTGGCGCGGGTGGTGTTAAATAGCCACCCGTTGa                                                                                                                                            >  2:1495223/1‑150 (MQ=255)
          tggctggcTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGAt                                                                                                                                           <  2:3970702/150‑1 (MQ=255)
           ggctggctGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATGATTTGTCCCGCGGTCGTGTGTTGTGGCTGACGCCGGTGTGTTCTTCCCTCGGCGTGGTGGCGCTGGGGGTGTTTAATCGCCACCCGGTGagt                                                                                                                                          >  2:2389260/1‑148 (MQ=255)
            gctggctgTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGc                                                                                                                                         <  1:326190/150‑1 (MQ=255)
               ggctgTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCgg                                                                                                                                      <  2:3114258/150‑1 (MQ=255)
                gctgTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGgt                                                                                                                                     <  1:4153148/150‑1 (MQ=255)
                gctgTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGgt                                                                                                                                     <  2:649193/150‑1 (MQ=255)
                 ctgTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCTCCACCCGTTGATGCCGgtg                                                                                                                                    <  1:700506/150‑1 (MQ=255)
                  tgtgCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTGGGTTGTGGGTGGAGCCCGTGGTTTATTACAACGGCGTGGGGGCGCGGGGTGGGGTTAATAGCCACCCCCTGATTCCGgggt                                                                                                                                   >  1:2349199/1‑150 (MQ=255)
                    tgCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGtat                                                                                                                                 <  1:3049154/150‑1 (MQ=255)
                     gCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGtata                                                                                                                                <  2:3858612/150‑1 (MQ=255)
                      cTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTatat                                                                                                                               <  2:4364032/150‑1 (MQ=255)
                      cTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTatat                                                                                                                               <  2:724566/150‑1 (MQ=255)
                      cTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGGTGATTTCAGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCCGTGATGCCGGGGTatat                                                                                                                               >  2:127869/1‑150 (MQ=255)
                       tGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATc                                                                                                                              <  2:4155071/150‑1 (MQ=255)
                       tGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATc                                                                                                                              <  1:2439073/150‑1 (MQ=255)
                          cGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGat                                                                                                                           <  2:2221768/150‑1 (MQ=255)
                           ggTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTGTGTTGTGGCTGACGCCGGTGATTTCTGCCATCGGCGTGGTGGCGCTTGTGGGGTTAATTCGCCACCCGTTGATGCCGGTGTATATAGata                                                                                                                          >  2:702888/1‑150 (MQ=255)
                             ttATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATAtt                                                                                                                        <  1:3080814/150‑1 (MQ=255)
                              tATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATAttt                                                                                                                       <  2:1967146/150‑1 (MQ=255)
                                 ggCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGc                                                                                                                    <  2:2347866/150‑1 (MQ=255)
                                  gcgcAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCg                                                                                                                   <  1:4047252/150‑1 (MQ=255)
                                   cgcAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGt                                                                                                                  <  1:3038647/150‑1 (MQ=255)
                                       gCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAg                                                                                                              <  1:4023989/150‑1 (MQ=255)
                                          gTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCGGACGCCGGTGATTTATTCCATAGGCGTGGTTGCGCTGGTGGTGTTAATTATCCACCCCTTGTTTCCGGTGTATATCGATATTTTGCGTAAAGTgg                                                                                                           >  2:607085/1‑150 (MQ=255)
                                           tAAAGCGACTGACCGTTTGAGTCATTCTTTGTCCCGCGGTCGTGTGTTGTGGCGGACCCCCGTGCTTTCTGCCAACGGCGGGGGGGCGCTCGTGGGGGTAATTAGCCACCCCGTGAGGGCGGGGGATATCGAGATATTTCGGAAAGGGGt                                                                                                          >  2:2763409/1‑150 (MQ=255)
                                            aaaGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGtt                                                                                                         <  1:2646024/150‑1 (MQ=255)
                                            aaaGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGtt                                                                                                         <  2:1571632/150‑1 (MQ=255)
                                            aaaGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGtt                                                                                                         <  2:1893589/150‑1 (MQ=255)
                                             aaGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTg                                                                                                        <  1:1979151/150‑1 (MQ=255)
                                             aaGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTg                                                                                                        <  1:1979131/150‑1 (MQ=255)
                                             aaGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTg                                                                                                        <  2:3242405/150‑1 (MQ=255)
                                              aGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTgg                                                                                                       <  2:280250/150‑1 (MQ=255)
                                                  aCTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTGTGTTGTTGCAGTCCCCGTTGATTTATTCCAAACGCGTGGTTGCGCGGGTGGTGTTAATTAGCCACCCCGTGATTGCGGGGTTTATCGATATTTTTAGTAAAATTGTTGGGGtt                                                                                                   >  2:1611650/1‑150 (MQ=255)
                                                    tGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTa                                                                                                 <  2:1394427/150‑1 (MQ=255)
                                                     gACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCTCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAg                                                                                                <  1:3309344/150‑1 (MQ=255)
                                                      aCCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTTTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAgg                                                                                               <  1:2997466/150‑1 (MQ=255)
                                                        cGTTTGAGTCATTATTTGTCCCGCGGTCGTGTGTTGTTGCTGAAGCCGGTGATTTATGCCAAAGGCGTGGTGGCGCTGGTGGTGTTAAATAGCCACCCCATTATTCCGGTGTATATAGATATTTTTAGTAAATTTGTTTGGGtttttgat                                                                                             >  2:3480599/1‑145 (MQ=255)
                                                          tttGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGAt                                                                                           <  1:1241728/150‑1 (MQ=255)
                                                           ttGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTTGCTGACGCCGTTGATTTCTGCCCACCGCGTGGTGGCGCAGGTGGTGTTAATTCCCCACCCGGTGATGCCGGGGTATATATATATATTTCGTAAAGTGGTTGGGGGTTATGAGATa                                                                                          >  2:1325703/1‑150 (MQ=255)
                                                             gAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGt                                                                                        <  1:2303566/150‑1 (MQ=255)
                                                                 cATTATTTGTCCCGCGGTCGTTTGTTTTGGCGGACGCCGTTTATTTAATCCAAAGGCGTGGTGGCGCTTGTGGTTTTAATTAGCCACCCCGTTCTGCCGGTGTATATAGATATTTTTCGTAAAGTTGTTGGGGTTTATGAGATAGTAttt                                                                                    >  2:3566484/1‑149 (MQ=255)
                                                                   ttattTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTtgtg                                                                                  <  1:1570969/150‑1 (MQ=255)
                                                                    tattTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGc                                                                                 <  1:1903105/150‑1 (MQ=255)
                                                                             cgcgGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCt                                                                        <  2:825276/150‑1 (MQ=255)
                                                                               cgGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGa                                                                      <  2:4274497/150‑1 (MQ=255)
                                                                                ggTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGAt                                                                     <  1:2589064/150‑1 (MQ=255)
                                                                                   cGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCg                                                                  >  2:1414954/1‑150 (MQ=255)
                                                                                   cGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCg                                                                  >  2:144690/1‑150 (MQ=255)
                                                                                     tttGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGAc                                                                <  1:679151/150‑1 (MQ=255)
                                                                                         gtgtgGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCtt                                                            <  1:4265422/149‑1 (MQ=255)
                                                                                           gtgGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGc                                                          >  2:3176781/1‑150 (MQ=255)
                                                                                            tgGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGcc                                                         <  2:2522269/150‑1 (MQ=255)
                                                                                             ggCTGACGCCGGTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCcg                                                        >  1:1726753/1‑150 (MQ=255)
                                                                                               cTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCcgcg                                                      >  1:3172667/1‑150 (MQ=255)
                                                                                               cTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCcgcg                                                      >  1:905408/1‑150 (MQ=255)
                                                                                                  aCGCCGTTGATGTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCAACCCGTTGATGCCGGTGTATATCGTTATTGTGCTTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCATGATGCGACGCTTGCCGCGTCt                                                   <  2:447338/150‑1 (MQ=255)
                                                                                                   cGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCtt                                                  >  1:1032864/1‑150 (MQ=255)
                                                                                                   cGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCtt                                                  <  2:2309319/150‑1 (MQ=255)
                                                                                                    gCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCTCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTa                                                 >  1:934593/1‑150 (MQ=255)
                                                                                                         tGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCTCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAgg                                            <  2:2068587/150‑1 (MQ=255)
                                                                                                           aTTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                          >  1:3059355/1‑150 (MQ=255)
                                                                                                             ttCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                        <  1:3843143/150‑1 (MQ=255)
                                                                                                              tCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                       >  2:2094776/1‑150 (MQ=255)
                                                                                                                tGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCGTATCAGGCCTACaa                                     >  1:498950/1‑150 (MQ=255)
                                                                                                                 gCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGGGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaa                                    >  2:3013048/1‑150 (MQ=255)
                                                                                                                    aTCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGGGTATATCGATATTTTGCGTCAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACg                                 >  1:288751/1‑150 (MQ=255)
                                                                                                                    aTCGGCGTGGTGGCGCTGGTGGTGTTAATTCACCACCCGGTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCATGTGCGGGTTGCCAGATGCGACGCTTGCCGCCTCATATCACGCCAACAAAACg                                 >  1:2806318/1‑150 (MQ=255)
                                                                                                                       ggCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                              <  1:2090778/150‑1 (MQ=255)
                                                                                                                       ggCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                              <  1:3216756/150‑1 (MQ=255)
                                                                                                                       ggCGTGGTGGCGCTGGTGGTGTTAAATCGCCACCCGTTGATGCCGGGGTATATCGATATTTTGCGTAAAGTGGATGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGAGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                              >  2:1564955/1‑150 (MQ=255)
                                                                                                                       ggCGTGGTGGCGCTGGTGGAGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                              <  2:205293/150‑1 (MQ=255)
                                                                                                                           tggtggCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAcc                          <  1:1717803/150‑1 (MQ=255)
                                                                                                                              tggCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGt                       >  1:4361005/1‑150 (MQ=255)
                                                                                                                               ggCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTa                      >  2:151645/1‑150 (MQ=255)
                                                                                                                                gcgcTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAg                     <  2:2702057/150‑1 (MQ=255)
                                                                                                                                 cgcTGGTGGTGTTAATTCTCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                    <  2:1596722/150‑1 (MQ=255)
                                                                                                                                 cgcTGGTGGTGTTAATTCTCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                    <  2:1717543/150‑1 (MQ=255)
                                                                                                                                 cgcTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                    <  2:3546942/150‑1 (MQ=255)
                                                                                                                                   cTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTc                  >  1:2426756/1‑150 (MQ=255)
                                                                                                                                     tggtggTGTTAACTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCg                 <  2:1153875/150‑1 (MQ=255)
                                                                                                                                      ggtggtGTTAATTCTCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCgg                >  2:2202583/1‑150 (MQ=255)
                                                                                                                                       gtggtgTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGa               <  2:556454/150‑1 (MQ=255)
                                                                                                                                       gtggtgTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGa               <  2:1574627/150‑1 (MQ=255)
                                                                                                                                         ggtgTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa             <  1:1623124/150‑1 (MQ=255)
                                                                                                                                         ggtgTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTGTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTGGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa             <  2:503072/150‑1 (MQ=255)
                                                                                                                                             ctAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGc         <  1:2097189/149‑1 (MQ=255)
                                                                                                                                              tAATTCTCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg        >  2:3135985/1‑150 (MQ=255)
                                                                                                                                                    gCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg  >  1:351607/1‑150 (MQ=255)
                                                                                                                                                    gCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg  <  1:3778920/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACG  >  CP009273/68400‑68696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: