| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 650,141 | G→T | 10.0% | V428V (GTC→GTA) | dcuC ← | anaerobic C4‑dicarboxylate transport |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 650,141 | 0 | G | T | 10.0% | 792.3 / 49.3 | 251 | V428V (GTC→GTA) | dcuC | anaerobic C4‑dicarboxylate transport |
| Reads supporting (aligned to +/- strand): ref base G (119/105); new base T (14/13); total (133/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
TGGGTGACATGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGAT > CP009273/649992‑650290 | tGGGTGACATGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTG‑Cg > 2:32644/1‑150 (MQ=255) gggTGACATGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCTCCGGTACCGAGGTGCGTTTTA‑CGa > 2:763288/1‑150 (MQ=255) gTGGCATGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACt > 2:3117780/1‑150 (MQ=255) aCATGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCa < 1:485119/150‑1 (MQ=255) cATGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCaa > 2:1558920/1‑150 (MQ=255) tGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAAc < 2:2210951/150‑1 (MQ=255) tGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAAc < 1:777552/150‑1 (MQ=255) gATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACg < 1:4025218/150‑1 (MQ=255) gATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACg < 1:1593477/150‑1 (MQ=255) gATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACg > 1:4527469/1‑150 (MQ=255) tAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGc > 2:1228826/1‑150 (MQ=255) cGGAGTAAACTTGCCTCCGGAATTACTTTTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACTATAAAAATCACCAAACCAACAAGCACCGGTACCGTGGTGCGTTTTA‑CGAATTCAAACGGCGAGATc < 1:877016/150‑1 (MQ=255) ggaggaAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATcc < 2:1293504/150‑2 (MQ=255) ggaggaAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCt < 2:3834339/150‑1 (MQ=255) gagtaAACTTGCCTCCGGAATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCtt < 2:4218563/150‑1 (MQ=255) gaggaAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCtt > 2:2942896/1‑150 (MQ=255) aggaAACTTGCCTCCGGCATTACTATTTACGTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTc < 2:4329520/150‑1 (MQ=255) aaCTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCa > 1:1092093/1‑150 (MQ=255) aaCTTGCCTCCGGCATTACTATTTACTGGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCa < 2:291144/150‑1 (MQ=255) aCTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTCCCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCAt < 1:572249/150‑1 (MQ=255) aCTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGCGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCAt < 1:2618018/150‑1 (MQ=255) cTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATc > 2:2817297/1‑150 (MQ=255) gCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCg > 1:4537707/1‑150 (MQ=255) cTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGc > 1:2913556/1‑150 (MQ=255) ggCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAAcc < 2:491743/150‑1 (MQ=255) ggCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAAcc > 1:375797/1‑150 (MQ=255) gCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCg > 1:998066/1‑150 (MQ=255) tACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCACCCGCAAc > 1:3615698/1‑150 (MQ=255) aCTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACACGCCCCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACg < 2:907091/150‑1 (MQ=255) aTTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGCGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACt < 2:1893008/150‑1 (MQ=255) aTTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGAACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGCGGTGCTTTTTA‑CTACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACt < 1:3099402/150‑1 (MQ=255) ttACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACAGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTAc > 2:161870/1‑150 (MQ=255) aCTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGc > 1:2147538/1‑150 (MQ=255) cTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGcc > 1:769139/1‑150 (MQ=255) tgtgACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAAc < 2:3526128/150‑1 (MQ=255) tgtgACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAAc < 1:4376414/150‑1 (MQ=255) tgtgACCGCTGCTGCCGTTCCTGGCACAATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACACGCACCGGTACCGCGGTGCTTTTTA‑CGACTACAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAAc < 1:3842970/150‑1 (MQ=255) tgACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACgg < 2:3515498/150‑1 (MQ=255) tgACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACgg > 2:3983316/1‑150 (MQ=255) tgACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACgg > 1:2744382/1‑150 (MQ=255) gACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACggg < 2:2744382/150‑1 (MQ=255) aCCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CTACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGc < 2:3383991/150‑1 (MQ=255) ccGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CTACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCg > 2:2342468/1‑150 (MQ=255) gggtggtgcCGTTCCTGGCACCATCTGCTCTGTAGCAACGATAACAATCACCAAACCAACCAGCACGGGGACCGCGGTGGGTTTTA‑CTACTACAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGa < 1:1504616/144‑1 (MQ=255) cGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGa > 2:3666605/1‑150 (MQ=255) ctgctgCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAACCCACCACGCACCGGTACCGCGGTGCGTTTTC‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGaaa < 1:3185035/150‑1 (MQ=255) tgctgcCGTTCCTGGCACCATCAGCTCTGTAGCAACTATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAg < 1:3244199/150‑1 (MQ=255) gctgcCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAACCCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAgg < 1:2453189/150‑1 (MQ=255) gctgcCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCACCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAgg < 1:2453337/150‑1 (MQ=255) tgcCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAACCCACCAACCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGt < 2:4163263/150‑1 (MQ=255) tgcCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGt > 1:3412540/1‑150 (MQ=255) tgcCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGt > 2:2253936/1‑150 (MQ=255) ccGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGCGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTAc < 1:3614029/150‑1 (MQ=255) tCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAACCCACCCAGCACCGGTACCGCGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGcc < 2:454663/150‑1 (MQ=255) tCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGcc < 2:596234/150‑1 (MQ=255) ccTGGCCCCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCa > 1:1878368/1‑150 (MQ=255) cTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCaa < 1:3289941/150‑1 (MQ=255) cACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGtt > 1:2582590/1‑150 (MQ=255) cACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGtt > 1:2582728/1‑150 (MQ=255) cACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGtt > 1:1379663/1‑150 (MQ=255) cATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGa < 2:162581/150‑1 (MQ=255) ctctGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTg > 2:4478052/1‑150 (MQ=255) tGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTgcag < 1:352194/150‑1 (MQ=255) tGTAGAAACTATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CTACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCTAAAGGGTACGGCCAAGGTTTGACGCCTgcag < 1:3182997/150‑1 (MQ=255) gTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTgcagc > 1:1841240/1‑150 (MQ=255) aGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCAt < 2:1098913/150‑1 (MQ=255) gCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATc < 2:4078670/150‑1 (MQ=255) gCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATc < 2:4127727/150‑1 (MQ=255) aaCGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCgg > 1:3701308/1‑150 (MQ=255) aaCGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCgg > 2:249772/1‑150 (MQ=255) aTAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATa > 1:905566/1‑150 (MQ=255) aTCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CTACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCaaa > 1:221583/1‑150 (MQ=255) ccaaaccaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACg > 1:3011419/1‑150 (MQ=255) caaaccaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGc > 1:3900671/1‑150 (MQ=255) aaaccaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGcc > 1:1395789/1‑150 (MQ=255) accaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCgg > 1:2057016/1‑150 (MQ=255) accaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCgg > 2:179028/1‑150 (MQ=255) accaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCgg < 2:73947/150‑1 (MQ=255) ccaaCACGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCggg < 2:2997180/150‑1 (MQ=255) ccaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCggg > 1:1708928/1‑150 (MQ=255) ccaaCAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCggg > 1:3561594/1‑150 (MQ=255) caacaaGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCgtgt > 2:4519496/1‑150 (MQ=255) caacaaGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCgtgt > 2:2243552/1‑150 (MQ=255) caacaaGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGt > 2:1350617/1‑150 (MQ=255) caaGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCACACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTaa < 2:668280/150‑1 (MQ=255) cACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGcc > 2:1492180/1‑150 (MQ=255) ggTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGaa > 2:3101738/1‑150 (MQ=255) gTACCGCGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAag < 2:2065416/150‑1 (MQ=255) tACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAaga > 2:3157840/1‑150 (MQ=255) tACCGAGGTGCG‑TTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAagag < 1:606200/150‑1 (MQ=255) ccGAGGTGCTTTTTC‑CGACTCCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGt < 1:3071697/150‑1 (MQ=255) ccGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGt > 2:1194234/1‑150 (MQ=255) ccGAGGGGCGTTTTA‑CGACATCAACCGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGt < 1:1839882/150‑1 (MQ=255) aGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTgcg < 2:655800/150‑1 (MQ=255) gTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGcc > 2:3026790/1‑150 (MQ=255) gTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGtt > 2:2457062/1‑150 (MQ=255) cttttACCGACTACAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGt < 1:860270/149‑1 (MQ=255) ttttC‑CGACTACACACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGttt < 1:3455058/150‑1 (MQ=255) ttttA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGttt < 1:679463/150‑1 (MQ=255) gACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGat > 1:1115700/1‑150 (MQ=255) | TGGGTGACATGATAAAGCCGGAGGAAACTTGCCTCCGGCATTACTATTTACTTGCCTGTGACCGCTGCTGCCGTTCCTGGCACCATCAGCTCTGTAGCAACGATAACAATCACCAAACCAACAAGCACCGGTACCGAGGTGCGTTTTA‑CGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGAT > CP009273/649992‑650290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |