| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 910,654 | C→G | 11.4% | intergenic (‑341/+154) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 910,654 | 0 | C | G | 11.4% | 238.0 / 3.8 | 96 | intergenic (‑341/+154) | ybjE/aqpZ | putative transporter/aquaporin Z |
| Reads supporting (aligned to +/- strand): ref base C (63/21); new base G (8/4); total (71/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCG > CP009273/910509‑910803 | ttCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAggg < 2:687593/150‑1 (MQ=32)ttCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAggg < 2:2245495/150‑1 (MQ=32) cccTGACGGCCGGGGCAGCCCACATGGTTGTGGGCTGCGGGCGCGTTTTACAGGGATGTTCCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAggggg < 1:821055/150‑1 (MQ=255) cccTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATACGTCGCGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCggggg > 1:234242/1‑150 (MQ=12) cccTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAggggg < 1:821034/150‑1 (MQ=32) cccTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAggggg < 1:1809407/150‑1 (MQ=32) cccTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAggggg > 1:234248/1‑150 (MQ=32) cccTGAAGGCCGGGGCAGCCCACAGGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAggggg < 1:4087004/150‑1 (MQ=17) cccGGATGGCCGGGGCAGCCCACTTGGTTGTGGGCTGCGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCGGTAAGTGATAAGTCGTGGGCACGGCGCAGCGGCGATTTTGTTGGCCAGAGCCCGGGGGTGCAggggg < 1:821048/150‑1 (MQ=11) ccTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggc < 2:964977/150‑1 (MQ=32) tGAAGGCCGGGGCAGCCCACCTGGATGTGGGCGGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcgg < 2:117327/150‑1 (MQ=17) tGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcgg > 2:1507420/1‑150 (MQ=32) tGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcgg > 1:1799617/1‑150 (MQ=32) tGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcgg < 1:4001386/150‑1 (MQ=32) aaGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcggcg > 2:2556716/1‑150 (MQ=32) aaGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcggcg > 2:291738/1‑150 (MQ=32) cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGCGGGGgcggccgcgga > 1:909309/1‑148 (MQ=12) cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAGTTTGTTCGCCAGAGCCCGGGGGTGGCCGGGggggcggcgga > 1:3045075/1‑148 (MQ=11) cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTGTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAGTTTGTTCGCCCGAGCCCGGGGGTGGCGgggggggggggggg > 1:7368/1‑146 (MQ=11) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg < 2:1609124/150‑1 (MQ=32) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg < 2:1603298/150‑1 (MQ=32) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg < 2:3881246/150‑1 (MQ=32) ggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg‑g < 2:3366260/150‑1 (MQ=32) ggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg‑g > 2:1474703/1‑150 (MQ=32) aGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGCGGGGGGGGGGGGGCTTG‑gccg > 1:894546/1‑150 (MQ=11) cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑gccgcc < 2:1392139/150‑1 (MQ=32) ccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGAGGGGGGGGCGGCGGGTG‑GGCGccc > 1:847632/1‑150 (MQ=11) ccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGGTTG‑GCCGccc > 1:847609/1‑150 (MQ=17) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGcccc < 2:3700746/150‑1 (MQ=32) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGcccc > 2:2903534/1‑150 (MQ=32) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGcccc > 2:2905131/1‑150 (MQ=32) caTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGccccca > 2:1377553/1‑149 (MQ=17) caTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCt < 2:395415/150‑1 (MQ=32) agggATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTg < 1:1570686/148‑1 (MQ=17) tGGTTGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTATGGGATAAGTCGAGGGCACCGCGCAGGGGCGATTTTGTTCGCCAGAGCCGGGGGGTGCTGGGGGCGGCGGCGATTG‑GCCGCCCCCTg‑c < 2:2100961/150‑1 (MQ=11) tGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATCAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTg‑c < 2:2192096/150‑1 (MQ=17) tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTg‑cgcgc > 2:2952415/1‑150 (MQ=32) tgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGGGGCGGGGGTTT‑GGCGCCCCCAg‑cgcgcgc > 1:3177161/1‑148 (MQ=11) gggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGGGGCGGCGGTTG‑GCCCCCCCCCG‑CGCGCGcc > 1:2300484/1‑150 (MQ=11) tGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCTTgc > 2:3996534/1‑150 (MQ=17) gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGATTG‑GCCGCCCCCGG‑CGCGCTCCTTgcg > 1:1499978/1‑150 (MQ=17) gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCATgcg > 1:1499914/1‑150 (MQ=12) gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTgcg > 2:1613590/1‑150 (MQ=32) gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATGTTGTTCGCCAGAGCCCGGGGGTGGCGGGGGCGGCGGCGGTTG‑GGCGCCCCCCG‑CGCGCGCCTTgcg > 1:4262207/1‑150 (MQ=11) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTgcgc > 2:2009300/1‑150 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTgg > 2:2345099/1‑150 (MQ=17) gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGGGGCGGCCCTTG‑GGCGCCCCCAC‑CGCGCGCCATGCGCCacaggc > 1:3072047/1‑145 (MQ=11) gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCCGCGCTTG‑GGCGCCCCCCC‑CGCGCGCCATGCGccccgggc > 1:3908300/1‑144 (MQ=11) gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCCGGGGCGGCGGGGCGTG‑GGCGCCCCCAG‑CCCCCGCCCTGCGccccaggc > 1:3908290/1‑144 (MQ=11) ttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGGGCTTG‑GCCGCCCCCGG‑CGCGCGCCGTGCGCCCCTGGccaa > 1:3315298/1‑147 (MQ=11) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGAGGGGGGGGCGGCGGTTG‑GCCGCCCCCAG‑CCCGCTCCATTCGCCACTGGccaaaat > 1:1331492/1‑144 (MQ=11) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGtt > 2:2562063/1‑150 (MQ=40) ggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGGGGCGAGTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑ACAATGTTg > 2:2744927/1‑150 (MQ=255) gtggtACCTCGCGCCCGACCGGGTTGCCGTTCGGGATTCGTGGGGGGCACCGCGCCGGGGTTTTTTTGTTCGCCAGTGCCCGGGGGTGGCGGGGGCGGCGGCGATTG‑GCCGCCCCCCGCCGCGCTCCTTGCGCCAGTGGC‑AATATGTTGc < 2:2063373/146‑1 (MQ=9) aTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGAGGGGGCGGGGGCGCGTG‑GCCGCCCCCAG‑CGCGCGCCATGCGCCCGTGGC‑AATATGTTGCt > 1:2137917/1‑150 (MQ=14) tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCGCCGTGCGCCAGGGGC‑AATATGTTGCtt > 2:525918/1‑150 (MQ=255) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAGTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGATTG‑GCCGCCCCCGG‑CGCGCGCCATGCGCCCGGGGC‑ACAATGTTTCGTAGc > 1:4425895/1‑150 (MQ=11) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCGG‑CGCGCTCCGTGCGCCACTGGC‑CATATGTTGCGTAGCTCa > 1:2550508/1‑150 (MQ=14) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCCCCCCCAG‑CGCGCTCCATGCGCCACTGGC‑AATATGTTTCTTAGCtaa > 1:4158146/1‑148 (MQ=14) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTTCGCCAGTGGC‑AATATGTTGCTTAGCTCCTGa > 2:2930443/1‑150 (MQ=255) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGC‑AAAATGTTGCTTAGCGCATGa > 2:2931671/1‑150 (MQ=255) gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGC‑AAAATGTTGCTTATCTCATGaaa > 2:1324183/1‑150 (MQ=255) ggTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGcaa > 2:2971047/1‑150 (MQ=255) ggTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCATGCGCCAGTGGC‑AATATGTTTCTTAGCTCATGAAAGGATCGcaa > 2:2970134/1‑150 (MQ=255) aGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCCCCCCCAG‑CCCGCACCATGCGCCCCGGGC‑AATAATTTTCTTAGCTCAATAAAGGAGCGcaacaa > 1:3333993/1‑150 (MQ=14) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTT‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATTTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:347599/1‑150 (MQ=255) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:348371/1‑150 (MQ=255) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:348270/1‑150 (MQ=255) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCGTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:347826/1‑150 (MQ=255) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CCCCCTCCATGCGCCAGTGGC‑AAAATTTTTCTTATCTCAATAAAGGAGCGCAACAAcat > 2:2342874/1‑150 (MQ=14) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAATG‑GCCGCCCCCAG‑CGCCCGCCTTGCGCCCGTGGC‑CATCTGTTGCTGTGCGCCTGACAGGGGGGCAACAAgct > 2:2754196/1‑148 (MQ=14) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCCGCGATTG‑GCCGCCCCCAG‑CGCGCTCCATGCCCCAGTGGC‑AAAATGTTGCGTAGCTCAAGAAAGGAGCCCAACAAcat > 2:2754869/1‑150 (MQ=17) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGATTT‑GCCGCCCCCAG‑CGCGCTCCATGCGCCAGTGGC‑CAAATTTTTCATAGCACAATTAAGGAGCGCAACAAaatga > 1:1080772/1‑150 (MQ=14) aTAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCACTGGC‑AATATTTTGCTTAGCTCATGAAAGGAGCGCAACAAGAAGATGAATc > 2:1430991/1‑150 (MQ=255) aTAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCGG‑CGCGCACCTTGCCCCAGTGGC‑AATAAGTTGCTTAGCACATGAAAGGAGAGCAACAAGATGATGAAta > 2:3196821/1‑149 (MQ=18) gTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGGTTG‑GCCGCCCCCGG‑CGCGCGCCATGCGCCCGTGGC‑AATATTTTTCTTAGCTCATGTAAGGGGCGCAAACAGATGATGAATCAACa > 1:2193923/1‑150 (MQ=18) gTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGGTTG‑GCCGCCCCCAG‑CGCGCTCCATGCGCCCCGGGC‑AAAAAGTTTATTAGCTCAAGAAAGGAGCGCAAAAACATTATGAATCAACa > 1:4029761/1‑150 (MQ=17) gAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCCGCGCATG‑GCCGCCCCCAG‑CGCGCGCCTTGCGCCAGTGGC‑AAAATGTTGCTTAGCTCAAGAAAGGACCGCAACAACATGAAGAATCaaactat > 2:4417427/1‑145 (MQ=18) gCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGGTTT‑GCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATTATGAATAAAAAAATaacc > 2:4383541/1‑149 (MQ=18) gCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTG‑GCCGCCCCCTG‑CGCGCGCCTTGCGCCCGTGGC‑CAAATGTTGCTTAGCTCATGAAAGGGGCGCAACAAGATGATGAATCAACAAATaaca > 2:650513/1‑150 (MQ=18) gCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTT‑GCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTTCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATAAAAATATaaca > 2:4383249/1‑150 (MQ=18) gCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCATTCGCCAGTGGC‑AATATTTTTCTTATCTCATTAAATGAGCGCAAAAAGAATTTTAATAAAAATATaaaa > 1:2626015/1‑148 (MQ=14) gcgcAGCGGTTTTTTTTTTCGCCAGTGGGGGGGGTGGCTGGGGGCGGCGTC‑ATTGCCCCCCCCCCCG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATc < 1:2151867/150‑1 (MQ=21) ccggggctATTTTGTCCGCGTGCGCGGGGGGGGGGGGGGGGGGGCGGCGTGCG‑CCCCCCCCCTC‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTa < 2:376387/146‑1 (MQ=255) cAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGC‑AAAATGTTGCTTAGCTCATGAAATGAGCGCAACAAGATGATTTAACAACATATAACAAAATATTa > 2:2259951/1‑150 (MQ=18) gATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCAG‑CGCCCTCCTTGCGCCAGTGGC‑AAAATGTTGCTTAGCTAAAGAAAGGAGCGCAACAACATGATGAATCAAAAAATAAAAAAATAATaaaaaaaa > 2:3861021/1‑149 (MQ=18) gTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGa > 2:1367942/1‑150 (MQ=255) tCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTT‑GCCCCCCCCGG‑CGCGCGCCGTTCGCCCGTGGCAAAAATGTGGGTT‑GCTCCAGTAAGGAGCGCAACAAGAAGATGAAACAACAAATAACAACAACTTAAAAAAAGGCCGGaaa > 2:1311968/1‑148 (MQ=16) tCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCCGTGGC‑CATATGTTGCTTAGCTCATGAAAGGAGCGCAACAACATGATGAATCAACATATAACAAACTCATAAAAAAAGGCCTGACa > 2:3650054/1‑150 (MQ=25) cGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCATGCGCCAGTGGC‑AATATGTTGCTTAGCTCCTGAAAGGAGCGCAACAAGAAGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACaa > 2:3345558/1‑149 (MQ=255) agCCCGGGGGTGCAGGGGGGGGCGGCGATTG‑GCCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGC‑AAAAATTTGCTTAGGTCATGAAAGGAGCGCAACAAAATGATGAATCAACATAAAACAACATCTTAAAAAAAAGCCTGACAATAAGcc > 1:2205160/1‑150 (MQ=25) tggggggTGGGGGGGGGGGGTGTGTTTG‑CCCCCCCCCCGCCGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg < 2:3092636/148‑1 (MQ=255) cGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGc > 2:1404603/1‑150 (MQ=255) cGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGc > 2:1814879/1‑150 (MQ=255) gggggTGGTGGGGGGGGGGGGTTTTG‑GCCGCCCCCCC‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc < 2:2181556/150‑1 (MQ=255) gggggTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc > 2:2385677/1‑150 (MQ=255) cAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg > 2:789607/1‑150 (MQ=255) | TTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTG‑GCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGC‑AATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCG > CP009273/910509‑910803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |