Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,193,516 T→G 24.3% N60H (AAT→CAT)  ymfE ← e14 prophage; putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,193,5160TG24.3% 303.7 / 135.2 172N60H (AAT→CAT) ymfEe14 prophage; putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base T (50/80);  new base G (17/25);  total (67/105)
Fisher's exact test for biased strand distribution p-value = 8.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 179 total aligned reads displayed.

ATAACGGTTTTATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAAT  >  CP009273/1193369‑1193665
                                                                                                                                                   |                                                                                                                                                     
aTAACGGTTTTATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATtaa                                                                                                                                                     <  2:1914140/150‑1 (MQ=255)
 tAACGGTTTTATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATtaat                                                                                                                                                    <  1:4335197/150‑1 (MQ=255)
    cGGTTTTATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATaaa                                                                                                                                                 >  1:2395095/1‑150 (MQ=255)
     ggTTTTATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAg                                                                                                                                                <  2:1501442/150‑1 (MQ=255)
      gTTTTATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGc                                                                                                                                               >  2:4533086/1‑150 (MQ=255)
        tttATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGctc                                                                                                                                             <  2:3340825/150‑1 (MQ=255)
         ttATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGctct                                                                                                                                            <  2:3232222/150‑1 (MQ=255)
         ttATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGctct                                                                                                                                            <  2:432969/150‑1 (MQ=255)
          tataATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCtctc                                                                                                                                           <  1:1014329/150‑1 (MQ=255)
             aaTTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATg                                                                                                                                        <  2:677079/150‑1 (MQ=255)
             aaTTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATg                                                                                                                                        <  1:3561776/150‑1 (MQ=255)
              aTTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGa                                                                                                                                       <  1:2734872/150‑1 (MQ=255)
              aTTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGa                                                                                                                                       <  1:2734860/150‑1 (MQ=255)
              aTTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGa                                                                                                                                       >  1:3219973/1‑150 (MQ=255)
              aTTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGa                                                                                                                                       <  1:546023/150‑1 (MQ=255)
                 aGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCt                                                                                                                                    <  2:3467785/150‑1 (MQ=255)
                 aGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCt                                                                                                                                    <  1:284786/150‑1 (MQ=255)
                 aGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCt                                                                                                                                    >  1:1743989/1‑150 (MQ=255)
                  gATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCtt                                                                                                                                   <  1:1819257/150‑1 (MQ=255)
                   aTGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCttt                                                                                                                                  >  1:819024/1‑150 (MQ=255)
                    tGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTa                                                                                                                                 <  1:3257716/150‑1 (MQ=255)
                      cTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAAt                                                                                                                               >  2:2503711/1‑150 (MQ=255)
                       ttATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATa                                                                                                                              >  1:383357/1‑150 (MQ=255)
                          tCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGt                                                                                                                           <  2:3275166/150‑1 (MQ=255)
                           cccAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTg                                                                                                                          >  2:3903353/1‑150 (MQ=255)
                            ccAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTgg                                                                                                                         >  2:794579/1‑150 (MQ=255)
                            ccAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTgg                                                                                                                         <  1:4278318/150‑1 (MQ=255)
                            ccAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTgg                                                                                                                         <  1:4277850/150‑1 (MQ=255)
                             cAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTggg                                                                                                                        <  1:1509829/150‑1 (MQ=255)
                                aGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACa                                                                                                                     <  1:4483168/150‑1 (MQ=255)
                                   tatCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATAc                                                                                                                  >  2:3577173/1‑150 (MQ=255)
                                     tCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACtt                                                                                                                >  1:4309830/1‑150 (MQ=255)
                                      cGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACttg                                                                                                               >  2:1013828/1‑150 (MQ=255)
                                          cccGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAACAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACttggttg                                                                                                           <  2:701284/150‑1 (MQ=255)
                                            cGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTtggttggt                                                                                                         <  2:2135471/150‑1 (MQ=255)
                                            cGAAGTAGTTGGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTtggttggt                                                                                                         <  2:4280156/150‑1 (MQ=255)
                                                gtagtTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATg                                                                                                     <  2:4063375/150‑1 (MQ=255)
                                                gtagtTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATg                                                                                                     <  2:2270104/150‑1 (MQ=255)
                                                 tagtTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGt                                                                                                    <  1:1722407/150‑1 (MQ=255)
                                                 tagtTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGt                                                                                                    <  1:224834/150‑1 (MQ=255)
                                                 tagtTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGt                                                                                                    <  1:1097305/150‑1 (MQ=255)
                                                  agtTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGtt                                                                                                   >  1:2045176/1‑150 (MQ=255)
                                                   gtTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGtta                                                                                                  <  1:1511705/150‑1 (MQ=255)
                                                            cATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGa                                                                                         >  2:1710268/1‑150 (MQ=255)
                                                            cATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGa                                                                                         <  1:2295573/150‑1 (MQ=255)
                                                            cATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGa                                                                                         >  2:2824432/1‑150 (MQ=255)
                                                            cATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGa                                                                                         >  2:3025026/1‑150 (MQ=255)
                                                             aTTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGAt                                                                                        <  1:2568440/150‑1 (MQ=255)
                                                              ttGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATg                                                                                       <  1:4420393/150‑1 (MQ=255)
                                                                gTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTa                                                                                     <  2:1482899/150‑1 (MQ=255)
                                                                gTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTa                                                                                     <  2:3328599/150‑1 (MQ=255)
                                                                  tATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTAtt                                                                                   <  1:2981298/150‑1 (MQ=255)
                                                                   aTGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTc                                                                                  <  1:3827431/150‑1 (MQ=255)
                                                                   aTGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTc                                                                                  <  1:3743311/150‑1 (MQ=255)
                                                                     gTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACCTACTGGGTTGGTAATGTTATTAAAGGGATGTATTCGt                                                                                >  2:1532784/1‑150 (MQ=255)
                                                                      tAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTa                                                                               >  1:1812302/1‑150 (MQ=255)
                                                                      tAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTa                                                                               >  1:3316890/1‑150 (MQ=255)
                                                                        ggTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTaaa                                                                             >  2:918424/1‑150 (MQ=255)
                                                                         gTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAAt                                                                            <  1:3979328/150‑1 (MQ=255)
                                                                              aCGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTa                                                                       <  1:1940741/150‑1 (MQ=255)
                                                                               cGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAg                                                                      >  2:2782820/1‑150 (MQ=255)
                                                                                   ccGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACGTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGt                                                                  >  2:3072953/1‑150 (MQ=255)
                                                                                      cTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATg                                                               >  2:4167455/1‑150 (MQ=255)
                                                                                      cTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATg                                                               <  2:2170109/150‑1 (MQ=255)
                                                                                      cTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAAGAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATg                                                               <  2:204193/150‑1 (MQ=255)
                                                                                       tAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGc                                                              <  2:219520/150‑1 (MQ=255)
                                                                                        aaTTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCa                                                             >  1:1642996/1‑150 (MQ=255)
                                                                                           tAAATATGCAAAAATCTCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAata                                                          <  1:3287405/150‑1 (MQ=255)
                                                                                            aaaTATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAatat                                                         <  2:4423299/150‑1 (MQ=255)
                                                                                            aaaTATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAatat                                                         <  2:560139/150‑1 (MQ=255)
                                                                                              atatGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAatatat                                                       <  2:2599199/150‑1 (MQ=255)
                                                                                              atatGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAatatat                                                       <  1:3982370/150‑1 (MQ=255)
                                                                                                atGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTa                                                     <  2:2410729/150‑1 (MQ=255)
                                                                                                atGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTATAATAGGTGGGACATACTTGGGTGGTAATGTTATTAAAGGGATGTATTCGTAAATAAATAGAAGTATGCAATATATTa                                                     >  2:1997698/1‑150 (MQ=255)
                                                                                                atGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTa                                                     <  2:2876669/150‑1 (MQ=255)
                                                                                                atGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTa                                                     <  2:2878341/150‑1 (MQ=255)
                                                                                                  gCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGc                                                   <  2:1743989/150‑1 (MQ=255)
                                                                                                     aaaaTCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTa                                                <  2:1912796/150‑1 (MQ=255)
                                                                                                       aaTCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTCTTCGTAAATAACTAGACGTCTGCAATATATTAGCGTAtt                                              >  2:3907544/1‑150 (MQ=255)
                                                                                                       aaTCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCACAATGACTAAAGCTATCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTAtt                                              <  1:1377449/150‑1 (MQ=255)
                                                                                                          cGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTaa                                           <  1:3319707/150‑1 (MQ=255)
                                                                                                          cGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTaa                                           >  2:3394250/1‑150 (MQ=255)
                                                                                                            cAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGa                                         >  1:4138838/1‑150 (MQ=255)
                                                                                                              aaaGCACAAGGTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGaaa                                       >  1:730460/1‑150 (MQ=255)
                                                                                                                aGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGt                                     >  2:1233541/1‑150 (MQ=255)
                                                                                                                 gCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGAACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGtt                                    >  2:633952/1‑150 (MQ=255)
                                                                                                                      aGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCttt                               >  2:2305524/1‑150 (MQ=255)
                                                                                                                        gTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTAt                             <  2:3074406/150‑1 (MQ=255)
                                                                                                                        gTAATATACCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTAt                             <  2:383357/150‑1 (MQ=255)
                                                                                                                         tAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATg                            <  1:1439811/150‑1 (MQ=255)
                                                                                                                          aaTATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGa                           <  2:108966/150‑1 (MQ=255)
                                                                                                                          aaTATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGa                           <  2:108326/150‑1 (MQ=255)
                                                                                                                          aaTATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGa                           >  1:1142348/1‑150 (MQ=255)
                                                                                                                           atatACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGaa                          >  1:2939207/1‑150 (MQ=255)
                                                                                                                             ataCCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGt                        <  1:3074009/150‑1 (MQ=255)
                                                                                                                               aCCAAAAGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGttt                      <  2:4340123/150‑1 (MQ=255)
                                                                                                                                ccAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTa                     <  2:1492014/150‑1 (MQ=255)
                                                                                                                                   aaaGATAGTTCAAAATTAATAAATCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGc                  <  2:3702175/150‑1 (MQ=255)
                                                                                                                                     aGATAGTGCCCAATGAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCaa                >  1:1042680/1‑150 (MQ=255)
                                                                                                                                                   taataaAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAAt  >  1:3785939/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
ATAACGGTTTTATAATTAGATGCTTATCCCAAAGATATCGCACCCGAAGTAGTTTGGCTGCATTGTTATGTAGGTCTAACGCACCGCTAATTAAATATGCAAAAATCGCAAAAGCACAAGGTAATATACCAAAAGATAGTGCCCAATTAATAAAGCTCTCATGATCTTTAATAGGTGGGACATACTTGGTTGGTAATGTTATTAAAGGGATGTATTCGTAAATAACTAGAAGTATGCAATATATTAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAAT  >  CP009273/1193369‑1193665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: