| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,554,204 | A→T | 17.8% | L328* (TTG→TAG) | ddpB ← | D‑ala‑D‑ala transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,554,204 | 0 | A | T | 17.8% | 545.4 / 101.2 | 200 | L328* (TTG→TAG) | ddpB | D‑ala‑D‑ala transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (90/74); new base T (18/18); total (108/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 211 total aligned reads displayed.
CGCTGGTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCGGTGAGC > CP009273/1554059‑1554353 | cgcTGGTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATa > 1:3215709/1‑150 (MQ=255)cgcTGGTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATa < 2:691908/150‑1 (MQ=255) gcTGGTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATag > 1:1019392/1‑150 (MQ=255) tGGTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATagag < 2:3206381/150‑1 (MQ=255) ggTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGc > 1:1992898/1‑150 (MQ=255) gTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCa < 1:1704760/150‑1 (MQ=255) gTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCa < 1:647533/150‑1 (MQ=255) gTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCa > 2:4226022/1‑150 (MQ=255) aCGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAAt < 1:474182/150‑1 (MQ=255) aCGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAAt > 1:3645295/1‑150 (MQ=255) cGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATc < 1:2945190/150‑1 (MQ=255) ggTGAGCGGACTGCCTTTCATCATCCATACCAGTTTTTCTCCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATcc < 1:190779/150‑1 (MQ=255) ggACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATccaccacca > 2:492898/1‑150 (MQ=255) cTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGt > 2:3862233/1‑150 (MQ=255) cTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGt > 1:1852132/1‑150 (MQ=255) tGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGtt > 2:145491/1‑150 (MQ=255) tGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGtt > 2:4213677/1‑150 (MQ=255) tGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGtt > 2:1936161/1‑150 (MQ=255) ctgtCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGAc < 2:2840439/147‑1 (MQ=255) tCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAg < 2:4147482/150‑1 (MQ=255) aGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGca > 2:215953/1‑150 (MQ=255) cATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGcaca < 2:2976518/150‑1 (MQ=255) aTCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACAt > 1:2090001/1‑150 (MQ=255) aTCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACAt < 1:575537/150‑1 (MQ=255) ccAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCaaa < 2:1035539/150‑1 (MQ=255) ccAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCaaa < 1:502464/150‑1 (MQ=255) cAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAAt < 1:301040/150‑1 (MQ=255) cAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAAt < 1:4331591/150‑1 (MQ=255) aGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATg < 2:3657664/150‑1 (MQ=255) gTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAAAGa > 2:3944107/1‑150 (MQ=255) ttttGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGaa > 2:3437105/1‑150 (MQ=255) tttGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGaaa < 2:3319021/150‑1 (MQ=255) tGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAAcc < 2:758350/150‑1 (MQ=255) cACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCac < 1:2207652/150‑1 (MQ=255) aCCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCacg > 1:340329/1‑150 (MQ=255) aCCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCacg > 2:4020072/1‑150 (MQ=255) ccGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCacga > 2:1337276/1‑150 (MQ=255) gTTAAATCGGGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCTATACGCGGATCAATCCAAAAATAGAGAAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCacgacg < 1:3442767/150‑1 (MQ=255) gTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCacgacg > 2:770124/1‑150 (MQ=255) gTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCacgacg > 2:771053/1‑150 (MQ=255) ttAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACgg > 2:139506/1‑150 (MQ=255) aaaTCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCa > 1:3470360/1‑150 (MQ=255) aaaTCGCGTTGGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCCGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCa < 2:3089797/150‑1 (MQ=255) aaTCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCaa > 1:2609460/1‑150 (MQ=255) gcgTTTGTTTTGGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCCCCCGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGcc < 2:21760/150‑1 (MQ=255) cgTTTTTTTTTGGGGGCGTAGGGGGGAGGTTTCCTCGCTTAGAATAATTCACCACCTCCACGTCCGATACGCGTATCAATCAAATAATAGAGAAAATCCACCACCTGGTTGACCAGCACATAAGAAAATGAAACCACGACGGCAAAGccc < 1:3053695/150‑1 (MQ=255) tttgtttTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCAt > 2:668721/1‑150 (MQ=255) gtgtttTTGTGGGCGTCCGGCGGACGTTTCATCGCTTTGCTTCATTCACCACCTCCACGTCCGATACGGGTTTCATTCACCAATTTGAGCAAATCCACCACCTGTTTGACCAGCACTTACGAATATGAAACCACGACGGCAAAGCCCATc < 2:12508/149‑1 (MQ=255) gtttTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCAc < 2:1634949/150‑1 (MQ=255) tttttGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACt < 1:709821/150‑1 (MQ=255) ttGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGcc < 2:4296291/150‑1 (MQ=255) gtgGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGTATCAATCCACAAATATAGCAAATCCACCCCCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCgg < 1:951474/150‑1 (MQ=255) tgGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCggg > 1:3744690/1‑150 (MQ=255) gggCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGa > 2:4057246/1‑150 (MQ=255) ggCGTACGGCGGACGTGTCCGCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGaa < 2:2725245/150‑1 (MQ=255) gTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTc < 1:4144161/150‑1 (MQ=255) tACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCg > 2:598764/1‑150 (MQ=255) cggcggACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAg > 2:3820421/1‑150 (MQ=255) cggcggACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCAACACTGCCGGGAAGTCGAg > 2:555295/1‑150 (MQ=255) gACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCt < 2:2072850/150‑1 (MQ=255) tttCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCCTCACTGCCGGGAAGTCGAGCGCCTGTAt > 2:3720666/1‑150 (MQ=255) ttCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTAtt > 2:1730476/1‑150 (MQ=255) ttCCTCGCTTAGAATCATTCACCACCTCCACGTCCTATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCTGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTAtt < 1:2381208/150‑1 (MQ=255) tCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTg < 2:3555240/150‑1 (MQ=255) cGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGt > 1:1295123/1‑150 (MQ=255) ttAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCCGGTTGACCAGCACATACGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTtac < 1:2010152/150‑1 (MQ=255) ttAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTtac < 1:1485081/150‑1 (MQ=255) tAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTtact < 1:2476599/150‑1 (MQ=255) catcatTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTAcc > 1:230691/1‑150 (MQ=255) catcatTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTAcc > 1:2496685/1‑150 (MQ=255) catcatTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTAcc > 1:3030732/1‑150 (MQ=255) atcatTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTAccc < 2:1921915/150‑1 (MQ=255) catTCACCACCTCCACGTCCGATACGCGTATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCAt < 1:2495840/150‑1 (MQ=255) catTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACAACCAGGTTGACCAGCAAATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCAt < 1:4021391/150‑1 (MQ=255) atTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATg > 1:1839189/1‑150 (MQ=255) atTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATg > 2:138866/1‑150 (MQ=255) tCACCACCTCCACGTCCGATACGCGGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCa > 1:445602/1‑150 (MQ=255) caccacCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCAc > 1:224153/1‑150 (MQ=255) accaccTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCAcc > 1:4491742/1‑150 (MQ=255) ccaccTCCACGTCCGATACGCGGATCAATCCAATAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCAccc < 1:1640272/150‑1 (MQ=255) caccTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCa > 2:3420407/1‑150 (MQ=255) caccTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCa < 1:1805534/150‑1 (MQ=255) tCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTcc < 2:2232360/150‑1 (MQ=255) tCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTcc < 2:4507334/150‑1 (MQ=255) gATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGc > 1:2192539/1‑150 (MQ=255) cgGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAAc < 2:3215709/150‑1 (MQ=255) cgGATCAATCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAAc < 2:2613274/150‑1 (MQ=255) cgGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAAc < 2:1854090/150‑1 (MQ=255) cgGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAAc < 2:1992898/150‑1 (MQ=255) ggATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGACGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACg > 2:3461295/1‑150 (MQ=255) aTCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGt > 1:369153/1‑150 (MQ=255) aTCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGt > 1:2632293/1‑150 (MQ=255) aaTCCACTAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGACGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTc > 2:2740124/1‑150 (MQ=255) aaTCCACAAATAGAGAAAATCCACCACCATGTTGACCATCACAAAAGCAAATGAAACCACGACGGCAAAGCCCAGCACTGCCGGGAAGTCTAGCGCCTGTATAGATGTTACTACCCATGCACCAATACCGGGCCAGGCAAACACGGTTTc > 2:3045341/1‑150 (MQ=255) aTCCACAAATAGAGCAAATCCACCACCCGGTTGACCAGCACATAAGCAAATGAACCCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCg < 1:145332/150‑1 (MQ=255) cacaAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCGGTg > 1:1125851/1‑150 (MQ=255) cacaAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCGGTg > 2:4304850/1‑150 (MQ=255) cacaAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCGGTg > 1:3923839/1‑150 (MQ=255) caAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCGGTGAg > 2:900461/1‑150 (MQ=255) aaaTAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCGGTGAGc > 2:3260040/1‑150 (MQ=255) | CGCTGGTCACGGTGAGCGGACTGCCTTTCAGCATCCATACCAGTTTTGCACCGTTAAATCGCGTTTGTTTTTGTGGGCGTACGGCGGACGTTTCCTCGCTTAGCATCATTCACCACCTCCACGTCCGATACGCGGATCAATCCACAAATAGAGCAAATCCACCACCAGGTTGACCAGCACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGATGTTACTACCCATGCACCCATTCCGGGCCAGGCAAAAACGGTTTCGGTGAGC > CP009273/1554059‑1554353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |