| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,555,972 | T→A | 13.2% | D256V (GAT→GTT) | ddpA ← | D‑ala‑D‑a la transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,555,972 | 0 | T | A | 13.2% | 896.8 / 105.7 | 287 | D256V (GAT→GTT) | ddpA | D‑ala‑D‑a la transporter subunit |
| Reads supporting (aligned to +/- strand): ref base T (131/118); new base A (19/19); total (150/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 294 total aligned reads displayed.
CCTGATAATCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGCTGA > CP009273/1555823‑1556121 | ccTGATAATCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAt > 2:863565/1‑150 (MQ=255)ccTGATAATCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAt > 2:2713956/1‑150 (MQ=255) tGATAATCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACAATGACTTTAATTTCCTGCTTCAGGGCGTTGAGGTGATcc > 1:2667770/1‑150 (MQ=255) aTAATCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCAc > 1:1809862/1‑150 (MQ=255) aTCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCgg > 1:62959/1‑150 (MQ=255) aTCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCgg > 1:2766194/1‑150 (MQ=255) cGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATATGTAACGCGCAGTGTCGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCa < 1:3686117/150‑1 (MQ=255) cGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCa < 2:21795/150‑1 (MQ=255) ggTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAg > 1:4195444/1‑150 (MQ=255) ggTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAg > 2:333820/1‑150 (MQ=255) tAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAgcg < 2:1453926/150‑1 (MQ=255) ccAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATc < 2:241855/150‑1 (MQ=255) ggAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGc > 2:2692366/1‑150 (MQ=255) ggAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGc > 1:3392895/1‑150 (MQ=255) gAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGca > 2:1514168/1‑150 (MQ=255) tGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGcaatgt < 1:2156953/150‑1 (MQ=255) ggCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGcaatgtc > 2:3561158/1‑150 (MQ=255) gCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGcaatgtca < 2:2147702/150‑1 (MQ=255) aCGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCaatgtcaatgtc < 2:1689337/150‑1 (MQ=255) cGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCg > 1:2513931/1‑150 (MQ=255) cGCAGATCCGCCTGATTAAGAGGCGCTTTGCAGTTATTCAGATACAGAAAAGTAACGCGCAGAGACCGATACTCTTCCACATTTACTTTATTTTACTGCTTCAGGGCGGTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCg > 1:2405253/1‑150 (MQ=255) gCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGc > 2:2987615/1‑150 (MQ=255) aGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCa > 2:3899951/1‑150 (MQ=255) aGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCa > 1:3738071/1‑150 (MQ=255) cGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGga < 2:2876172/150‑1 (MQ=255) cGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGAATTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGga > 1:4066979/1‑150 (MQ=255) cGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATAATCTGCCACAATGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGga > 1:3045301/1‑150 (MQ=255) gCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGgag > 1:1047270/1‑150 (MQ=255) ccTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGgaga < 2:1287964/150‑1 (MQ=255) cTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGagag > 2:1001063/1‑150 (MQ=255) tGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAAAGTCAATGTCGCCACGGGAGAGc > 1:2733598/1‑150 (MQ=255) tAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCAGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCa > 1:3981761/1‑150 (MQ=255) gagGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGc < 2:4474995/150‑1 (MQ=255) agGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCg > 1:3198014/1‑150 (MQ=255) agGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCg > 1:422188/1‑150 (MQ=255) agGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCg < 2:3647745/150‑1 (MQ=255) cgcTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACg > 2:4163962/1‑150 (MQ=255) tGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAgg < 2:31036/150‑1 (MQ=255) gTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACt < 2:3448575/150‑1 (MQ=255) ttCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCa < 2:2714729/150‑1 (MQ=255) tCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc > 2:1840903/1‑150 (MQ=255) atacagataGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCaat > 1:1250887/1‑150 (MQ=255) ataGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAAtttt < 1:3561158/150‑1 (MQ=255) taGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAAttttt < 2:2289560/150‑1 (MQ=255) taGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAAttttt < 1:1546723/150‑1 (MQ=255) taGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAAttttt < 2:3613092/150‑1 (MQ=255) taGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAAttttt < 2:3614254/150‑1 (MQ=255) ggTATCGCGCAGTGTCGGATTCTCTGCCACATTGACTTTTTTTTCCTGCTTCAGGGCGTTGAGTTGATCCCCCGGCAGCGCATCGGCTATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTAc < 1:2857457/150‑1 (MQ=255) ggTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTAc < 1:4511513/150‑1 (MQ=255) gTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTAcc > 2:892098/1‑150 (MQ=255) aaCGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGa > 1:2650179/1‑150 (MQ=255) aaCGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGa > 1:1735611/1‑150 (MQ=255) gcgcAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATAc < 1:3888412/150‑1 (MQ=255) cgcAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATAcc < 1:2580491/150‑1 (MQ=255) tGACTGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGttt < 2:4347301/150‑1 (MQ=255) tGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGttt < 1:896666/150‑1 (MQ=255) gACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTg < 1:881559/150‑1 (MQ=255) gATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGt < 2:500390/150‑1 (MQ=255) aTACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGtt < 1:4404793/150‑1 (MQ=255) aCTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCg < 2:4241206/150‑1 (MQ=255) tGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGttt < 1:670818/150‑1 (MQ=255) ccACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTAt < 1:2207525/150‑1 (MQ=255) cacaTTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTAtt > 2:579052/1‑150 (MQ=255) cacaTTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTAtt > 2:2663969/1‑150 (MQ=255) acaTTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTg > 2:248595/1‑150 (MQ=255) acaTTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTg < 2:1814786/150‑1 (MQ=255) acaTTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTg > 1:3024532/1‑150 (MQ=255) caTTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGc < 1:3286925/150‑1 (MQ=255) tGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTg > 1:1422405/1‑150 (MQ=255) tGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTg > 2:3197789/1‑150 (MQ=255) ttATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTaa > 2:4086414/1‑150 (MQ=255) aTTTTCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATg < 2:2758870/150‑1 (MQ=255) ttttCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGc > 2:2750627/1‑150 (MQ=255) tttCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCg < 1:3078868/150‑1 (MQ=255) tttCCTGCTTCAGGGCGTTGAGTTGAACCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCg < 2:2357208/150‑1 (MQ=255) tCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTCATGCGGa > 2:3529328/1‑150 (MQ=255) ccTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGAt < 1:778832/150‑1 (MQ=255) ccTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGAt < 1:1012622/150‑1 (MQ=255) tGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGAttt > 2:2135034/1‑150 (MQ=255) tGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGAttt > 2:4071249/1‑150 (MQ=255) tGCTTCAGGGCGTTGAGTTGATCCACAGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGAAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGACTGGGTAATGCGGAttt < 1:938457/150‑1 (MQ=255) gCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTg > 2:712161/1‑150 (MQ=255) cTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTgg > 2:3718818/1‑150 (MQ=255) ttCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGc > 2:1483834/1‑150 (MQ=255) tCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCa > 2:2060596/1‑150 (MQ=255) cAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCAc > 1:472111/1‑150 (MQ=255) gttgagttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAAc > 1:2111642/1‑150 (MQ=255) ttgagttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACt > 1:725915/1‑150 (MQ=255) ttgagttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACt < 1:3851810/150‑1 (MQ=255) ttgagttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACt < 2:1302380/150‑1 (MQ=255) ttgagttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACt < 2:1303530/150‑1 (MQ=255) tgagttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTa < 1:1030489/150‑1 (MQ=255) agttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAAt < 1:189488/150‑1 (MQ=255) gttgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAAtt < 2:1962454/150‑1 (MQ=255) tgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGc > 2:3344834/1‑150 (MQ=255) tgaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGc > 2:1063310/1‑150 (MQ=255) gaTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGCt < 2:935499/150‑1 (MQ=255) aTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGCTg < 2:3973783/150‑1 (MQ=255) aTCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGCTg > 2:2973257/1‑150 (MQ=255) tCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGCTGa > 2:3915780/1‑150 (MQ=255) | CCTGATAATCGGTAGACCAGGAAATGGCCCGACGCAGATCCGCCTGATTAAGAGGCGCTTTGCTGTTATTCAGATACAGATAGGTAACGCGCAGTGACGGATACTCTGCCACATTGACTTTATTTTCCTGCTTCAGGGCGTTGAGTTGATCCACCGGCAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCACCAATAATTTTTACCGATACCCGTTTGAAGTTCGGTTTATTGCCTGGGTAATGCGGATTTGGCACCAGAACTAATTGCTGA > CP009273/1555823‑1556121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |