| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,102,807 | C→T | 15.9% | A87T (GCG→ACG) | wzxB ← | putative polisoprenol‑linked O‑antigen transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,102,807 | 0 | C | T | 15.9% | 561.9 / 85.8 | 207 | A87T (GCG→ACG) | wzxB | putative polisoprenol‑linked O‑antigen transporter |
| Reads supporting (aligned to +/- strand): ref base C (81/93); new base T (21/12); total (102/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.79e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 213 total aligned reads displayed.
CCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACC > CP009273/2102658‑2102954 | ccAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGc > 1:2178973/1‑150 (MQ=255) cAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGcc > 1:1139443/1‑150 (MQ=255) tggttttaTTAAATTCCCTAATATTGATGTAACACACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCaaaa < 1:3989527/143‑1 (MQ=255) aGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCaaaa > 1:4069921/1‑150 (MQ=255) gggTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCaaaaa > 2:4414744/1‑150 (MQ=255) ggTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCaaaaaa > 1:1946556/1‑150 (MQ=255) ttAGATTAAATTCCCTACTAATGCAGTAACAAACGACCATATAATTACGGCATGCTTTTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAAt < 2:4385630/149‑1 (MQ=255) tAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATa > 2:2671676/1‑150 (MQ=255) aTTAAATTCCCTACTAATGCTGTAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGAc < 2:1940912/150‑1 (MQ=255) aTTAAATTCCCTAATAATGAAGTAAAAAACGACCATATAATTACGGCATGCTTGTTATATTCATGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGAc < 2:3854320/150‑1 (MQ=255) aTTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGAc > 2:879231/1‑150 (MQ=255) aTTAAATTCCCGAATAATGCCGGAACACACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGAc < 1:3008194/150‑1 (MQ=255) aaTTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTa > 2:3915909/1‑150 (MQ=255) aTTCCCGACTATTGCAGTAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTAc < 2:554175/150‑1 (MQ=255) aTTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCTAAAAATATACGTTAc > 2:2579310/1‑150 (MQ=255) ttCCCTAATAATGCAGTAAAAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACt < 1:993552/150‑1 (MQ=255) tCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACtt > 1:1748863/1‑150 (MQ=255) cccTACTACTGAAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACttt < 2:1915372/150‑1 (MQ=255) cccGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACttt > 1:2568153/1‑150 (MQ=255) cccGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACAGCCCAAAAAATAGACGTTACttt > 2:838718/1‑150 (MQ=255) ccGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTa > 1:1547732/1‑150 (MQ=255) ccGACAAATGAAGTAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTa < 2:3477100/150‑1 (MQ=255) attAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCt < 1:1726425/148‑1 (MQ=255) aCTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCt > 1:3629727/1‑150 (MQ=255) tAATGCCGGAACAACCGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAAGAGCACCGCCCAAAAAATAGACGTTACTTTATCttt < 2:2806808/150‑1 (MQ=255) tGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACt > 2:2106642/1‑150 (MQ=255) gCAGGAAAAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTa < 2:1881564/150‑1 (MQ=255) cAGTAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTAt < 2:1513625/150‑1 (MQ=255) aGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATc > 1:1024056/1‑150 (MQ=255) taaaaaaCGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATctg < 1:3617213/146‑1 (MQ=255) taaCAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATctg < 2:2520407/149‑1 (MQ=255) cAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAATAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATctgctg > 1:4500728/1‑150 (MQ=255) cAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATctgctg > 2:2808347/1‑150 (MQ=255) cAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATctgctg > 2:2809251/1‑150 (MQ=255) cAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATctgctg < 1:3768676/150‑1 (MQ=255) cAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGAAGATAAGAACTATTTTTGAAAATATCACCGTCAAAAAAATATAATTTACTTTATATTTAATATctgatg > 2:3362779/1‑150 (MQ=255) cAAACGACCATATAATTACGGCATGCTTGTTATATTCACGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATctgctg > 2:1953378/1‑150 (MQ=255) aaaCGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCtgctgc > 2:4472862/1‑150 (MQ=255) aCGACCATATACTTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCtt < 1:4323173/150‑1 (MQ=255) aCGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCtt > 1:1804816/1‑150 (MQ=255) aCGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCtt > 1:2221001/1‑150 (MQ=255) cGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCttt > 2:4088830/1‑150 (MQ=255) cGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCttt > 2:2891904/1‑150 (MQ=255) cATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCa < 2:3171680/150‑1 (MQ=255) atatAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCaa > 2:1883532/1‑150 (MQ=255) atatAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCaa > 1:711002/1‑150 (MQ=255) gCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGtt < 1:3101348/150‑1 (MQ=255) cATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTg > 2:311721/1‑150 (MQ=255) tGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCt < 2:578002/150‑1 (MQ=255) tGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCt < 2:578027/150‑1 (MQ=255) gCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTAATTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCtt < 1:937596/150‑2 (MQ=255) gTTATATTCAGGGACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTgag < 2:3553027/150‑1 (MQ=255) gTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTgag > 2:821756/1‑150 (MQ=255) gTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTgag < 1:4138601/150‑1 (MQ=255) tataTTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTATACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGAt > 1:2948667/1‑150 (MQ=255) tatTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTg < 2:4534655/150‑1 (MQ=255) cAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAAc > 2:3733944/1‑150 (MQ=255) aCAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCatat < 1:4011457/150‑1 (MQ=255) caagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATAtt < 2:2925405/150‑1 (MQ=255) aagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTc < 2:2361583/150‑1 (MQ=255) caagTTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTcaac < 2:3959204/150‑1 (MQ=255) agGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTcaacaa > 2:2200142/1‑150 (MQ=255) gTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaac > 1:4244732/1‑150 (MQ=255) cATCGAATTTAATAAAATCAATTTAATGACGATAAGAACTATATTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCAGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACAt < 2:2934477/150‑1 (MQ=255) aTCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACAtt > 1:2499187/1‑150 (MQ=255) cGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTAt < 1:3120472/150‑1 (MQ=255) gTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCata > 1:1091317/1‑150 (MQ=255) gTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTAAACAAACATTATCata > 1:2081860/1‑150 (MQ=255) tAAGATAATAATTGTTATGTCGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCatata < 2:3803982/150‑1 (MQ=255) aaGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCatatat > 2:1433080/1‑150 (MQ=255) aaGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCatatat > 1:3444494/1‑150 (MQ=255) aGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCAtatata > 1:2629305/1‑150 (MQ=255) aaTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCAt > 1:4537378/1‑150 (MQ=255) aTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATa > 2:1276510/1‑150 (MQ=255) aTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATa < 2:1748836/150‑1 (MQ=255) tCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAg < 1:1218601/150‑1 (MQ=255) aTGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCg > 1:2258133/1‑150 (MQ=255) aTGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTCTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACAATATTCAACAAACATTATCATATATAGCATAGTCg > 2:4328959/1‑150 (MQ=255) aaTGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTg < 1:3808747/150‑1 (MQ=255) tGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGc > 1:3416249/1‑150 (MQ=255) tGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGc < 2:1175697/150‑1 (MQ=255) tGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGc > 1:1885381/1‑150 (MQ=255) gACGATAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCa > 1:1167119/1‑150 (MQ=255) aCGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaa > 2:4452332/1‑150 (MQ=255) gATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaaaa > 1:1934401/1‑150 (MQ=255) gATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaaaa > 2:688273/1‑150 (MQ=255) aTAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaaaaa > 1:74373/1‑150 (MQ=255) tAAGAACTATTTTTGAAAATATCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAAc < 1:2671676/150‑1 (MQ=255) aaGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAAcc > 2:3566152/1‑150 (MQ=255) aGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCg > 2:1768560/1‑150 (MQ=255) tATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAatat < 2:4339715/150‑1 (MQ=255) tttGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCg < 2:1536733/150‑1 (MQ=255) ttGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGa > 1:1200017/1‑150 (MQ=255) aaaaTATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAt < 2:3240847/150‑1 (MQ=255) aaaaTATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAt > 1:3041916/1‑150 (MQ=255) aaaaTATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAt < 2:2484351/150‑1 (MQ=255) atatCACCGTCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAtttt < 1:1132330/150‑1 (MQ=255) tCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAg < 2:1139443/150‑1 (MQ=255) aCCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGa < 2:2221161/150‑1 (MQ=255) cGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGAcc > 2:142879/1‑150 (MQ=255) | CCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACC > CP009273/2102658‑2102954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |