| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,123,590 | A→T | 13.5% | V257E (GTG→GAG) | wcaD ← | putative colanic acid polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,123,590 | 0 | A | T | 13.5% | 673.4 / 80.4 | 220 | V257E (GTG→GAG) | wcaD | putative colanic acid polymerase |
| Reads supporting (aligned to +/- strand): ref base A (76/114); new base T (6/24); total (82/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.20e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 222 total aligned reads displayed.
ATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAATATTATC > CP009273/2123442‑2123736 | aTAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACcac > 2:2087128/1‑150 (MQ=255) aaGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACacc < 1:3056118/150‑1 (MQ=255) tGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACaccaac > 1:1614579/1‑150 (MQ=255) aGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACaccaacca > 1:813342/1‑150 (MQ=255) gCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAg > 1:2424033/1‑150 (MQ=255) ccAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAgg > 2:2987163/1‑150 (MQ=255) ccAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAgg > 1:4059951/1‑150 (MQ=255) ccAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAgg > 2:727943/1‑150 (MQ=255) cAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGa < 2:2553004/150‑1 (MQ=255) cAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGa > 2:1872805/1‑150 (MQ=255) ctCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATa < 2:782462/149‑1 (MQ=255) ctCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATa < 2:782831/149‑1 (MQ=255) aTCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGTGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATa > 2:1390923/1‑150 (MQ=255) aTCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATa > 2:1321466/1‑150 (MQ=255) aTCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATa > 2:352524/1‑150 (MQ=255) aTCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATa > 2:21818/1‑150 (MQ=255) tCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATAc > 1:4448068/1‑150 (MQ=255) tCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATAc > 2:4157086/1‑150 (MQ=255) tCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATAc > 1:2175015/1‑150 (MQ=255) tCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATAc > 1:875372/1‑150 (MQ=255) tGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAg > 2:3165257/1‑150 (MQ=255) tGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAg < 2:467866/150‑1 (MQ=255) tGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAg < 1:3535882/150‑1 (MQ=255) cTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCa < 1:1814723/150‑1 (MQ=255) tACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCag < 2:3795859/150‑1 (MQ=255) tACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCag < 1:1169720/150‑1 (MQ=255) cacCGTAAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCagag < 1:70075/150‑1 (MQ=255) acCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAgaga < 1:4480193/150‑1 (MQ=255) gTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAAt > 1:1040819/1‑150 (MQ=255) aaTATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCaa > 1:2642295/1‑150 (MQ=255) atatGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGACACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAAt > 2:4330442/1‑150 (MQ=255) atatGGGTCAAAGAAGAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCTTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAAt < 2:3099685/150‑1 (MQ=255) atGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACACTACGATAATATGATGACGATCCTTCCGTTCCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCacggc < 2:3375256/150‑5 (MQ=255) atGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGc > 2:2019316/1‑150 (MQ=255) gggTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTa > 1:4242588/1‑150 (MQ=255) ggTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCCGAGAAATCAATGCTaa > 1:2742920/1‑150 (MQ=255) tCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACg < 2:3886756/150‑1 (MQ=255) tCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACg < 1:637012/150‑1 (MQ=255) aataaTAACCGACCATCACCAGCGGACCGACAAGACGATAATATGATGACTATCCTTCCGTACCTAAATCGACCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTa < 1:278152/147‑1 (MQ=255) aaGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTa < 1:4027169/150‑1 (MQ=255) aaGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTa < 1:1452272/150‑1 (MQ=255) aaTAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACt > 1:3927872/1‑150 (MQ=255) aaTAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACt > 2:452775/1‑150 (MQ=255) cGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCt < 2:2192276/150‑1 (MQ=255) gACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCtt < 1:1113253/150‑1 (MQ=255) gACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCtt < 1:2814919/150‑1 (MQ=255) cAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCctc < 2:1474442/150‑1 (MQ=255) aGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCctct < 2:1279232/150‑1 (MQ=255) ggACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTTTTTa > 1:9631/1‑150 (MQ=255) ccGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTc > 1:3301406/1‑150 (MQ=255) ccGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTc > 2:3913932/1‑150 (MQ=255) ccGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTc > 1:2669617/1‑150 (MQ=255) gACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAg < 1:404282/150‑1 (MQ=255) gACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAg < 1:404237/150‑1 (MQ=255) cAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGat < 2:2719243/150‑1 (MQ=255) aTACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGatat < 2:3635083/150‑1 (MQ=255) tACGATAATAAGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATAtt < 1:337205/150‑1 (MQ=255) aCGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTg < 1:3436708/150‑1 (MQ=255) aCGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTg < 2:1501332/150‑1 (MQ=255) gATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGaa > 1:2051069/1‑150 (MQ=255) atatGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGc < 1:1131222/150‑1 (MQ=255) tatGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGcc < 2:412392/150‑1 (MQ=255) gatgaCGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCAc > 2:4414498/1‑150 (MQ=255) gatgaCGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCAc < 1:1575592/150‑1 (MQ=255) gatgaCGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCAc < 2:2184139/150‑1 (MQ=255) gaCGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTcc > 1:1087207/1‑150 (MQ=255) cGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAg > 1:3703807/1‑150 (MQ=255) gATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGc < 1:653210/150‑1 (MQ=255) ttCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATa < 1:704974/150‑1 (MQ=255) tCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATaa < 1:1796250/150‑1 (MQ=255) gTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAAc < 1:2987163/150‑1 (MQ=255) gTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAAc > 1:2682580/1‑150 (MQ=255) tACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACa < 1:2478057/150‑1 (MQ=255) ccTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAgg < 1:476856/150‑1 (MQ=255) tAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGAt < 1:3011020/150‑1 (MQ=255) tAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGAt > 2:4237699/1‑150 (MQ=255) aTCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATaaa < 1:1357266/150‑1 (MQ=255) aTCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATaaa > 2:1825708/1‑150 (MQ=255) tCGCCCAGACGGTTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAg < 2:3546947/150‑1 (MQ=255) cGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAgg > 1:3549372/1‑150 (MQ=255) gCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGt < 2:2632345/150‑1 (MQ=255) ccAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCa < 2:59583/150‑1 (MQ=255) ccAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCa < 2:2424033/150‑1 (MQ=255) cAGACGGGTGGAAATATAAGGAAACGCGATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCAt < 1:185227/150‑1 (MQ=255) gAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGaa < 2:3380960/150‑1 (MQ=255) aaaTATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGaaa > 2:675204/1‑150 (MQ=255) atatAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAAc > 1:75585/1‑150 (MQ=255) atatAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAAc > 2:1013307/1‑150 (MQ=255) aaGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATc > 1:3820713/1‑150 (MQ=255) aaGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATc < 2:2668433/150‑1 (MQ=255) aGGAAACGCGATTACCTCACCAACCAGTAATACAGCCAGAGAAATAAATGCTAACGTTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATcc < 1:1941145/150‑1 (MQ=255) aGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATcc < 1:4391145/150‑1 (MQ=255) gctaTTACAACACCAACATGGAATACTGCATGAGAATTCTATGCTTTCGGTAACTTTTTCTTAATCGCCTCTTTATTCTGATATTTAAATGCCCACTCCAGCAAATAAAACTGGATAAAGGTCATAACCCCTGAAAACGATCCGGattat < 2:2852976/147‑1 (MQ=255) cgATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGataata > 2:2048937/1‑150 (MQ=255) gATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAatat < 1:4319264/150‑1 (MQ=255) gATTACCTCACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAatat < 1:1323438/150‑1 (MQ=255) gATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAatat > 2:2847843/1‑150 (MQ=255) gATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAatat < 2:2585364/150‑1 (MQ=255) ttACCACACAAACCAGGAATACAGCCAGAGATATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAAtatta < 2:4511353/150‑1 (MQ=255) aCCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAATATTATc < 1:3623507/150‑1 (MQ=255) | ATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATCCTTCCGTACCTAAATCGCCCAGACGGGTGGAAATATAAGGAAACGCGATTACCACACCAACCAGGAATACAGCCAGAGAAATCAATGCTAACGGTAACTTTTTCTTAATCGCCTCTTTATTCAGATATTGAAATGCCCACTCCAGCAAATAAAACAGGATAAAGGTCATAACCCCTGAAAACGATCCGGATAATATTATC > CP009273/2123442‑2123736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |