| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,757 | T→A | 10.3% | intergenic (‑74/+234) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,757 | 0 | T | A | 10.3% | 527.5 / 9.5 | 189 | intergenic (‑74/+234) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base T (106/60); new base A (3/18); total (110/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.05e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 193 total aligned reads displayed.
GAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170608‑2170904 | gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 1:248196/150‑1 (MQ=255)gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 1:248067/150‑1 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTGTTAAAATAATTTAAAAAATTTTTTTTTAATATGTAGTTAAAGAta > 1:2256479/1‑149 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcaca < 2:3284570/150‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcaca < 2:594734/150‑1 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaa < 1:1357595/150‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAAc < 2:948969/150‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCTTTGTTCAGCATCTGCTTTGACGATACCACGTACATTTTAATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:3861171/150‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:2073873/150‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACaa < 2:1537792/150‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACaa < 2:352792/150‑1 (MQ=255) ccGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAAAATAAATAAATTATTTGTTTTTAAATATAGAGTTAACGATAACAAAAACGACAaaatt > 2:4414685/1‑149 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATATAATTAAATTATTTTTTTTTAATTATCGAGATAAAGATACCAAAAAAGACAAAATGaaa > 1:300006/1‑150 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGATTTAAAAATATAAATAAATTATTTTTTTTTTAATATAGAGATAACGATCACAAAAACGACAATATGaaaa > 2:648119/1‑150 (MQ=255) tAACCGCGGGGGTGGGCGTTGTTCAGCATCTGCTTTGTCGATACAACTTACTTTTTAATATCGTGTGGTTTGTTTTCGATTTCAAAATATATTTAATTTTTTTTTTTTTAAATATCGTTATAACGATCACAAAAACGACAATATGAAAat < 1:718585/150‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGAATTCAAAATATAATTAAATTATTTTTTTTTTAATATCGAGATAACCATCAAAAAAACGACAAAATGAAAatt > 2:2583147/1‑150 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTAAAAAAAAAAATTAAATATTTTTTTTTTAAAATAGAGATAAACATAAAAAAAACCACAaaatataaaat > 2:775494/1‑143 (MQ=255) cgcTGGGGGTTGTTCAGCATCTGCTTTGCCGATACCCCTAACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTAAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgagg < 1:1450883/150‑1 (MQ=255) tgtgCGTTGTTCAGAATCTGCTTTGTCGATCCCACGTAATTTTTCATATCGTGTCGTTTGTTTTCTATTACAAAATATATTGTAATTATTTTTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGt < 2:4178842/150‑1 (MQ=255) gCGTTGTACAGCATCTGCTTTGTCGATACCCCGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑aa < 2:1791827/150‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATTTCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAgg < 2:4311337/150‑1 (MQ=255) tgtaCAGCATCTGCTTGGTCGATACCACGTAAATTTTCATATCCTGTCTTTTTTTTGCGATTTCAAAATATATTTAATTTTTTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGc < 2:1916923/150‑1 (MQ=255) aGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTGAAAAAATAAATAAAATATTTTTTTTTTAATATAGAGATAAACAACACAAAAAAGAAAAAATTTAAAAAATTAGTGGAGTGTGAAGGCaaaa > 2:2679043/1‑150 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAAAAATGAAATTAATTGTTTTTAAAAATAGAGATAAACATAACAAAAAAGACAAAATTAAAAATATTAGAGGAGTG‑AAAGGCaaaaaaaa > 2:643728/1‑149 (MQ=255) cTGTTTTGTCGATCCCAATTAATTTTTAATATCTTTTCTTTTTTTTTCTATTAAAAAATATAATTAATTTTTTTTTTTTTAAATATCTATAAAACGAAAAAAAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACgg < 1:867863/150‑1 (MQ=255) tGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAAATAATTTTTTTTTAAAATAGAGATAACGATAACAAAAACAAAAAAATGAAAATTTATAGAGGAGTG‑TAATGCAAAAAAAAGGc > 2:4010831/1‑150 (MQ=255) tGTCGATCCCACTTACTTTTAAATAACTTGTCGTTTTTTTTCTTTTTAAAAATTAATTTAATTTTTTTTTTTTTAATTATCTATATAACTAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTccc < 2:3785456/150‑1 (MQ=255) tGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAAAATAATGAAAATATTTTTTTTTTAATATCGAGATAACCATAACAAAAAACACAAAATTAAAAATATTAGAGGAGGG‑AAAGGCAAAAAAAAGGCCTccc > 2:569307/1‑150 (MQ=255) tGTCGATACAACGTACATTTTAATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTccc < 2:3272734/150‑1 (MQ=255) ctaTACCACTTACTTTTTCATATCCTTTCTTTTTTTTTCTATTTAAAAATATAATTAAATTTTTTTTTTTTAAATTTCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGAt < 2:1353530/148‑1 (MQ=255) cGATACCACGTACATTTTCATATCCTTTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGAt < 2:1352224/150‑1 (MQ=255) aTACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAg < 2:2163261/150‑1 (MQ=255) aTACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTCAAAATATAAATAAAATATTTTTTTTTTTAAATAGAGATAAAGAGAACAAAAAACACCAAATGTAAATTAATAGAGGGGTG‑AAAGGCAAAAAAAAAGCCAcccccgag > 2:455974/1‑145 (MQ=255) acaaCGTAAATTTTCATATCCTGTCGTTTTTTTTGTATTTCAAAATATAATTAATTTATTTTTTTTTAAATATCTTTATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAggg < 1:2961047/147‑1 (MQ=255) cACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 2:1611546/150‑1 (MQ=255) ctttttCAGAGCCTGTCGTTTGTTTTCGATTACAAAATATAATGAATTTTTTTGTTTTTAAATATCGAGATAACTCTCACAAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:3082406/148‑1 (MQ=255) cATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:4488734/150‑1 (MQ=255) tctCCTTTTGTTTTTTTTCTATTACAAAATATAATTAAATTTTTTTTTTTTAAATATCGATAAACAGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 1:858406/148‑1 (MQ=255) tatCCTTTTTTTTTTTTTCTTTTAAAAAATATAAATAAATTTTTTTTTTTTAAATATCTATAAAAGTAAAAAAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 1:858411/150‑1 (MQ=255) tcccTGTCGTTTTTTTTCGATTAAAAAATAAAATGAAATTATTTTTTTTTAAATATCTATATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTga < 1:4412155/148‑2 (MQ=255) cGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 2:3087557/1‑150 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:4018277/1‑150 (MQ=255) tgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 1:195279/1‑150 (MQ=255) gtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 1:676077/1‑150 (MQ=255) tttCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGc < 2:2003100/150‑1 (MQ=255) tttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGc > 1:766888/1‑150 (MQ=255) tctaTTTCAAAATATAATTAAATTATTTTTTTTTAATTATCTAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg < 2:805102/147‑1 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:506279/1‑150 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:764121/1‑150 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 2:1894942/1‑150 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 1:4445950/1‑150 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 1:3449752/1‑150 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTGTTTATGCCGGAt > 2:2359108/1‑150 (MQ=255) cAAAATATAATTAAATTATTTTTTTTTAATTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg < 2:3915226/150‑1 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:3662138/1‑150 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:3769135/1‑150 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 2:271282/1‑150 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 2:3884543/1‑150 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:365955/1‑150 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:1835249/1‑150 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGAAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:3167745/1‑150 (MQ=255) atatAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 1:2906169/1‑150 (MQ=255) atatAATCAATTTTTTTTTTTTTAAATATCTATATAACGAAAACAAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 1:2412423/150‑1 (MQ=255) ataATGAATTTATTTGTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa < 2:3109242/150‑1 (MQ=255) aTGAAATTATTTTTTTTTAAATATCTAGATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt < 1:250223/150‑1 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:2060646/1‑150 (MQ=255) tGAATTTATTTTTTTTTAAATATAGATAAAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 1:1177777/150‑1 (MQ=255) taaaTTTTTTTTTTTTAAATATCCATATAACTATAAAAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc < 1:1339669/149‑1 (MQ=255) gAAATTATTTTTTTTTAAATATCGAGATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc < 2:3474078/150‑1 (MQ=255) aaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 1:3731565/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:2564644/1‑150 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:929728/1‑150 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg > 2:3351296/1‑150 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg > 2:3635103/1‑150 (MQ=255) ttttttttAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt < 1:1801477/147‑1 (MQ=255) ttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGTCAATAAAACGGCCTCCCGATAGGGAAGCCGAAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGAAGt > 1:94602/1‑150 (MQ=255) tttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 1:1043465/1‑150 (MQ=255) ttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTa > 1:1892611/1‑150 (MQ=255) ttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTa > 2:1039429/1‑150 (MQ=255) tttAAATATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt < 1:623323/150‑1 (MQ=255) tttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt > 2:153247/1‑150 (MQ=255) aaaaTATCGATATACCTAACAAAAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGt < 1:3132096/149‑1 (MQ=255) aaTATCTATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg < 2:127257/150‑1 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:3210748/1‑150 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:2247169/1‑150 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:4138302/1‑150 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:3589777/1‑150 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:2288041/1‑150 (MQ=255) atatCGAGATACCTAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg < 2:102169/150‑1 (MQ=255) atatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 1:2035419/1‑150 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 1:3582775/1‑150 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 2:2128406/1‑150 (MQ=255) tctataTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCAt < 1:3271199/145‑1 (MQ=255) aTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa < 2:2929647/150‑1 (MQ=255) aTAACGAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa < 2:3812385/150‑1 (MQ=255) tAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAg > 2:2465829/1‑150 (MQ=255) cGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACg > 1:4062192/1‑150 (MQ=255) ataTCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACg < 1:3475547/148‑1 (MQ=255) gATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 2:1497253/1‑150 (MQ=255) gATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 1:3665201/1‑150 (MQ=255) | GAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGC > CP009273/2170608‑2170904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |