| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,233,142 | A→T | 13.4% | V229E (GTG→GAG) | mglB ← | methyl‑galactoside transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,233,142 | 0 | A | T | 13.4% | 1067.9 / 127.0 | 341 | V229E (GTG→GAG) | mglB | methyl‑galactoside transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (143/152); new base T (15/31); total (158/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.60e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 343 total aligned reads displayed.
CAGTACGGTGCCCGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTAAGTGGTACGTGCT > CP009273/2232994‑2233291 | aGTACGGTGCCCGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACctct > 2:3751788/1‑150 (MQ=255) ggTGCCCGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGAt < 2:792277/150‑1 (MQ=255) cccGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTttg < 1:1770634/150‑1 (MQ=255) gCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTttgttg > 1:4338659/1‑150 (MQ=255) ccAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTgg > 1:153818/1‑150 (MQ=255) cACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCg < 1:4262474/150‑1 (MQ=255) cACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCg < 1:2470609/150‑1 (MQ=255) aCCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCgg < 1:866879/150‑1 (MQ=255) aTTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAg > 1:1601144/1‑150 (MQ=255) aTTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAg > 2:3291418/1‑150 (MQ=255) tCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACa < 2:3892946/150‑1 (MQ=255) cgcgccagcgcTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAg < 2:4091708/149‑1 (MQ=255) ccagcgcTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGt < 1:12997/150‑1 (MQ=255) ccagcgcTACTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGt > 1:2371645/1‑150 (MQ=255) gcgcTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCa < 1:2127496/150‑1 (MQ=255) gcgcTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCa < 1:2587742/150‑1 (MQ=255) cgcTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCat > 2:4413380/1‑150 (MQ=255) cgcTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCat > 2:3116344/1‑150 (MQ=255) gcTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCatc > 1:3226555/1‑150 (MQ=255) cTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCatct < 2:929407/150‑1 (MQ=255) tCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCatctta > 2:3139263/1‑150 (MQ=255) tGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCatcttatc > 2:4009661/1‑150 (MQ=255) ggCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCatcttatct < 2:2317581/150‑1 (MQ=255) cAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCttt < 2:59270/150‑1 (MQ=255) gcgcATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCg < 1:3106922/150‑1 (MQ=255) cgcATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGc > 2:4060397/1‑150 (MQ=255) gcATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGcc > 1:339340/1‑150 (MQ=255) aTCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTg > 1:3653428/1‑150 (MQ=255) tCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGa < 2:3180617/150‑1 (MQ=255) gACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGc < 2:3648874/150‑1 (MQ=255) gACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGc > 2:1070874/1‑150 (MQ=255) aCGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCg < 1:970499/150‑1 (MQ=255) gCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGgt < 1:2989204/150‑1 (MQ=255) gCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGgt < 2:1148613/150‑1 (MQ=255) acCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCcac > 2:1303821/1‑150 (MQ=255) ccGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCcaca < 1:633845/150‑1 (MQ=255) ggAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACAtt < 2:631033/150‑1 (MQ=255) ggAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACAtt < 1:4112084/150‑1 (MQ=255) aaTGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGc > 1:456231/1‑150 (MQ=255) tGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTAt < 1:930603/150‑1 (MQ=255) tGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTAt < 1:2837193/150‑1 (MQ=255) tGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTAt > 2:3243455/1‑150 (MQ=255) ggACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATc > 1:3885502/1‑150 (MQ=255) ggACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATc < 1:1743734/150‑1 (MQ=255) ggACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATc > 1:1002127/1‑150 (MQ=255) gACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCt < 1:534043/150‑1 (MQ=255) aCTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCta < 2:1713148/150‑1 (MQ=255) aCTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCta > 1:1403754/1‑150 (MQ=255) cTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCtaa > 1:2549109/1‑150 (MQ=255) tgttgtGTGCTTTCAGAGCTTCAACAGCGACCATAGACATCGCATCGTTGTTGGCGATAACCACTTCGATTGTGATGGCGTTCGGGCCAGACAGCCAGTCGTCCATCTTATCTTTCGCATGAGCGTTGTCCAACATTGCGGTATCtaact > 1:2376378/1‑150 (MQ=255) ttgtGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCtaactgt < 1:1445736/150‑1 (MQ=255) gtgtgCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCtaactgtaa < 2:1563803/150‑1 (MQ=255) gtgtgCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCtaactgtaa < 1:2352775/150‑1 (MQ=255) gtgCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCtaactgtaact < 1:1023934/150‑1 (MQ=255) gtgCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCtaactgtaact < 2:2703459/150‑1 (MQ=255) tgCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCtaactgtaactg < 2:1263587/150‑1 (MQ=255) gCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTaactgtaactgt > 1:1195734/1‑150 (MQ=255) gCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTaactgtaactgt < 1:1663603/150‑1 (MQ=255) tttCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTc < 2:2751615/150‑1 (MQ=255) tttCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTc < 2:2340239/150‑1 (MQ=255) ttCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCa > 1:1986257/1‑150 (MQ=255) ttCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCa > 1:1986584/1‑150 (MQ=255) aGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGtt > 2:1696334/1‑150 (MQ=255) aGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGtg > 2:3950382/1‑149 (MQ=255) gcgcTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGttt < 2:2905779/150‑1 (MQ=255) gcgcTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGttt < 2:3330236/150‑1 (MQ=255) gcTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTg < 1:2722714/150‑1 (MQ=255) gcTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTg < 2:3848831/150‑1 (MQ=255) cTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGa > 2:4205402/1‑150 (MQ=255) tCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGGTCGGGCCAGACAGCCAGGCGTCCATCGTAGCGTTCGCCTGAGCGGTGTCCCACCTTGCGGTATCTAACTGTAACTGTTCAGGTTTGATg > 1:3025812/1‑150 (MQ=255) cAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGc > 2:3998382/1‑150 (MQ=255) ccGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCtt < 1:2148502/150‑1 (MQ=255) cgcgCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCttt < 1:2958455/150‑1 (MQ=255) gcCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATc > 2:1800093/1‑150 (MQ=255) cccATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCg > 2:3228839/1‑150 (MQ=255) ccATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGt > 1:2503520/1‑150 (MQ=255) cATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGtt > 1:3676111/1‑150 (MQ=255) cATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGtt < 2:1973685/150‑1 (MQ=255) cATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGtt < 1:3262087/150‑1 (MQ=255) aTTGCCATCGCATCGTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTc > 1:732906/1‑150 (MQ=255) ccATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAAtt > 1:3079204/1‑150 (MQ=255) ccATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAAtt > 2:1217400/1‑150 (MQ=255) ccATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAAtt < 2:1721718/150‑1 (MQ=255) atcgcatcgTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCt < 2:2759908/150‑1 (MQ=255) cgcatcgTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCttt > 1:1369793/1‑150 (MQ=255) catcgTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTaa > 1:2086715/1‑150 (MQ=255) atcgTTGTTGGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAAt < 2:4235404/150‑1 (MQ=255) atcgTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAAt > 2:4505910/1‑150 (MQ=255) ttgttgGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACg < 1:3573729/150‑1 (MQ=255) gttgGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTa < 1:353234/150‑1 (MQ=255) gttgGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTa < 2:3436085/150‑1 (MQ=255) ttgGCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTaa < 1:2780767/150‑1 (MQ=255) tgGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTAAg > 2:1226041/1‑150 (MQ=255) ggCGATAACCTCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTAAGt < 1:3355036/150‑1 (MQ=255) gATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTAAGTGGt > 2:4190515/1‑150 (MQ=255) tAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTAAGTGGTAc < 1:339599/150‑1 (MQ=255) tAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTAAGTGGTAc < 1:4416401/150‑1 (MQ=255) ccACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATAACGTAAGTGGTACGTg > 2:2451576/1‑150 (MQ=255) cACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGACTTTATCTTTCAATTCTTTAATCACGTAATTGGTAAGTga > 1:2811911/1‑149 (MQ=255) aCTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTATTTAATCACGTAAGTGGTACGTGCt > 2:1449239/1‑150 (MQ=255) | CAGTACGGTGCCCGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGCGCATCGACGCCAAACACCGGAATGCTGGACTTGTTGTGTGCTTTCAGCGCTTCAACCGCGCCCATTGCCATCGCATCGTTGTTGGCGATAACCACTTCGATTTTGTTGGCGTTCGGGCCAGACAGCCAGGCGTCCATCTTATCTTTCGCCTGAGCGGTGTCCCACATTGCGGTATCTAACTGTAACTGTTCAGTTTTGATGCCTTTATCGTTCAATTCTTTAATCACGTAAGTGGTACGTGCT > CP009273/2232994‑2233291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |