| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,327,398 | C→A | 5.7% | pseudogene (484/4605 nt) | yfaS ← | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,327,398 | 0 | C | A | 5.7% | 1082.7 / 28.8 | 281 | pseudogene (484/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (135/130); new base A (12/4); total (147/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.35e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 285 total aligned reads displayed.
CAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGTTGCACCACAATGCGAT > CP009273/2327249‑2327547 | gTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCgg < 1:3043800/150‑1 (MQ=255) tttACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGt > 1:2454012/1‑150 (MQ=255) tttACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGt < 1:2349228/150‑1 (MQ=255) ttACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTa > 1:2704135/1‑150 (MQ=255) aCCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAAc < 2:3212493/150‑1 (MQ=255) aCCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAAc > 1:651414/1‑150 (MQ=255) cGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTcac > 2:2091549/1‑150 (MQ=255) cGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTcac < 1:3279691/150‑1 (MQ=255) cTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACAtt < 1:3703206/150‑1 (MQ=255) tCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTc < 1:4006996/150‑1 (MQ=255) cGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTAGGGTAACGCCTGAGTCACATTCt < 1:4044804/150‑1 (MQ=255) ggTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGt > 1:512849/1‑150 (MQ=255) gCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTga > 1:1969955/1‑150 (MQ=255) aTAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTAGGGTAACGCCTGAGTCACATTCTGCCGTGACTgagaagaga > 2:910187/1‑150 (MQ=255) tAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTgagaagagaa > 2:1422734/1‑150 (MQ=255) gTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAg > 1:3315116/1‑150 (MQ=255) gTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAg < 2:768257/150‑1 (MQ=255) tAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGc > 1:1792190/1‑150 (MQ=255) cGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGc > 1:2204144/1‑150 (MQ=255) ggAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCa > 1:3250655/1‑150 (MQ=255) aaCTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATc < 1:292837/150‑1 (MQ=255) aCTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCa > 1:4358104/1‑150 (MQ=255) aCTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCa < 1:4095844/150‑1 (MQ=255) cTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCAc < 2:4468279/150‑1 (MQ=255) cTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCAc < 2:2488772/150‑1 (MQ=255) cTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCAc < 2:1787164/150‑1 (MQ=255) cTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCAc > 1:4034159/1‑150 (MQ=255) tttCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCAcgcg < 1:3988845/150‑1 (MQ=255) tttCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCAcgcg < 1:3669536/150‑1 (MQ=255) ttCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACgcgg > 2:3656266/1‑150 (MQ=255) ttCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACgcgg > 1:107469/1‑150 (MQ=255) cACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACgcggcg < 2:587137/150‑1 (MQ=255) aGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGAt < 1:2615988/150‑1 (MQ=255) aGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGAt > 1:3641238/1‑150 (MQ=255) gggATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGAttt > 1:1126305/1‑150 (MQ=255) gggATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGAttt < 1:2186330/150‑1 (MQ=255) gggATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGAttt < 1:830436/150‑1 (MQ=255) atatTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGcc < 2:1668548/150‑1 (MQ=255) tatTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCg < 2:4078096/150‑1 (MQ=255) tatTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCg > 2:2829490/1‑150 (MQ=255) tatTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCg > 2:3019418/1‑150 (MQ=255) ttttCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTAcc > 1:3367912/1‑150 (MQ=255) ttCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAg > 2:430370/1‑150 (MQ=255) tCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGt < 2:3657379/150‑1 (MQ=255) aGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTa > 1:1643721/1‑150 (MQ=255) aGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTa > 2:1758408/1‑150 (MQ=255) aGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTa < 1:2673605/150‑1 (MQ=255) aGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTa > 1:4306100/1‑150 (MQ=255) gCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTAt < 1:1491163/150‑1 (MQ=255) gCGGGGAAAACTGATTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTAt < 2:1575502/150‑1 (MQ=255) cGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATc > 2:3784093/1‑150 (MQ=255) ggAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTAGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCca < 2:1911322/150‑1 (MQ=255) aaaCTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAg > 1:2784464/1‑150 (MQ=255) aaCTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGc > 1:390990/1‑150 (MQ=255) aaCTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGc > 1:1718018/1‑150 (MQ=255) cTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTAGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCa > 1:743200/1‑150 (MQ=255) tGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAg < 1:2868148/150‑1 (MQ=255) tGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAg > 2:3934465/1‑150 (MQ=255) tgttCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTa > 2:2302576/1‑150 (MQ=255) tGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTa < 2:4014027/150‑1 (MQ=255) gTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTAt > 1:2536129/1‑150 (MQ=255) gTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTAt > 1:3336800/1‑150 (MQ=255) aCATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTCGCGTATTg > 2:1254974/1‑150 (MQ=255) aTAACGGGTAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGtt < 2:2634892/150‑1 (MQ=255) tAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTc > 1:2981560/1‑150 (MQ=255) aaCGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCa < 2:2521512/150‑1 (MQ=255) aaCGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCa > 2:708409/1‑150 (MQ=255) gggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGcc > 2:865534/1‑150 (MQ=255) gggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGcc < 1:2978720/150‑1 (MQ=255) gggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGcc > 1:1635752/1‑150 (MQ=255) ggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGccc < 1:1229671/150‑1 (MQ=255) ggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGccc < 1:1445145/150‑1 (MQ=255) ggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGccc > 1:3126027/1‑150 (MQ=255) ggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGccc > 1:2746260/1‑150 (MQ=255) ggAAGGTTTAATAATGGCATTGCCGAGCTGTAATTAGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGccc > 1:1397977/1‑150 (MQ=255) gAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCg > 2:3865767/1‑150 (MQ=255) gAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCg < 2:4163665/150‑1 (MQ=255) aGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTc < 2:1953333/150‑1 (MQ=255) tttAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGcc > 2:4270823/1‑150 (MQ=255) taataaTGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCa > 1:1836229/1‑150 (MQ=255) taataaTGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCa < 2:116037/150‑1 (MQ=255) taataaTGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCa < 1:962534/150‑1 (MQ=255) taatGGCAGTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGat < 2:2456883/150‑1 (MQ=255) aatGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGata < 1:3075965/150‑1 (MQ=255) aatGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGata < 2:1044153/150‑1 (MQ=255) tGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATAtt < 1:841186/150‑1 (MQ=255) ggCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTg > 2:2556833/1‑150 (MQ=255) ggCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTg < 2:512849/150‑1 (MQ=255) gCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGc < 1:3203967/150‑1 (MQ=255) cATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCg > 1:1595596/1‑150 (MQ=255) cATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCg < 2:4403094/150‑1 (MQ=255) ttGCCGAGCTGTAATTAGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGt > 1:3587455/1‑150 (MQ=255) tGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGtt < 2:3735529/150‑1 (MQ=255) tGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGtt < 2:3580284/150‑1 (MQ=255) gCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGTTg < 2:1626174/150‑1 (MQ=255) gCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGTTGcacca > 2:2055249/1‑150 (MQ=255) gTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGTTGCACCACaa > 2:456738/1‑150 (MQ=255) tAATTAGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTAAGACCGTCGCCCAGATATTGCGGTTGCACCACAAt > 1:2476969/1‑150 (MQ=255) gtCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGTTGCACCACAATGCg < 1:3483137/149‑1 (MQ=255) tCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGTTGCACCACAATGCGa < 2:3499238/150‑1 (MQ=255) | CAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCATAGTGGATAACGGAACTGTTTCACCAGGGGATATTTTTTCAGCGGGGAAAACTGGTTGTTCTGTACATAACGGGAAGGTTTAATAATGGCATTGCCGAGCTGTAATTCGGGTAACGCCTGAGTCACATTCTGCCGTGACTGAGAAGAGAAAGTACGCTGCATCACGCGGCGAGATTTGCCGTACCAGTTATCCCACAGCCAGGTTAGCGTATTGTTCAGCCCGTCGCCCAGATATTGCGGTTGCACCACAATGCGAT > CP009273/2327249‑2327547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |