| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,589,150 | C→A | 11.7% | L23L (CTG→CTT) | tmcA ← | elongator methionine tRNA (ac4C34) acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,589,150 | 0 | C | A | 11.7% | 1022.6 / 82.4 | 300 | L23L (CTG→CTT) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (128/137); new base A (16/19); total (144/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 307 total aligned reads displayed.
AACTCGCGCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCGAAACCACGTTTAAACCAG > CP009273/2589001‑2589299 | aaCTCGCGCCCAAGTAAAGTTTGTAGTGACGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAAACCACAGCCAGTCGCCAGGTAAGGCAACACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCaccacc > 2:2291268/1‑150 (MQ=255) cgcgCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCa > 1:2861613/1‑150 (MQ=255) cgcgCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCa > 1:4149084/1‑150 (MQ=255) cgcCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAg < 2:691835/150‑1 (MQ=255) cccAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAgcg < 2:920057/150‑1 (MQ=255) cAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAgcggc > 1:3808006/1‑150 (MQ=255) cAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAgcggc < 2:4486892/150‑1 (MQ=255) aGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGcggcgg < 1:3254050/150‑1 (MQ=255) aGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGcggcgg > 1:944579/1‑150 (MQ=255) tAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGAt > 1:89316/1‑150 (MQ=255) aaaGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATc < 2:1324845/150‑1 (MQ=255) aaGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATcc > 2:3372813/1‑150 (MQ=255) aGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGt > 1:1784372/1‑150 (MQ=255) aGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGt > 1:4059654/1‑150 (MQ=255) ccGAGGGAGAACAGTGGTTTTCAGCATCGGGCCGCGGCGAAATCCACCGCCCGTCGCCAGGTAAGGCATCCCGCACCTTAAGAGTATGCTCAAAACCCCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCa < 1:796516/150‑1 (MQ=255) cGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCAt > 2:636425/1‑150 (MQ=255) gAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCAtt > 2:4433609/1‑150 (MQ=255) gAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCAtt < 2:3310108/150‑1 (MQ=255) aGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGGTTCAttt > 2:3746761/1‑150 (MQ=255) ggAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTgc < 2:2910710/150‑1 (MQ=255) agaACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTgcgc > 1:3457581/1‑150 (MQ=255) gaACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCt > 2:1302632/1‑150 (MQ=255) gaACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCt > 1:2977841/1‑150 (MQ=255) gaACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCt < 2:3424657/150‑1 (MQ=255) gaACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCt > 2:932614/1‑150 (MQ=255) aaCAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTg > 1:1001575/1‑150 (MQ=255) aCAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGt < 2:3384986/150‑1 (MQ=255) cAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGtt > 1:1700078/1‑150 (MQ=255) aGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTa > 1:4512318/1‑150 (MQ=255) tGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAAt > 1:3443222/1‑150 (MQ=255) ggTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAAtg < 2:3945760/150‑1 (MQ=255) ggTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAAtg < 2:21509/150‑1 (MQ=255) tttCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAAtgtgt > 1:529468/1‑150 (MQ=255) ttCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAAtgtgtg < 2:70846/150‑1 (MQ=255) tCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGa < 2:2878381/150‑1 (MQ=255) tCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGa > 2:1497072/1‑150 (MQ=255) cATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAgcg < 2:774255/150‑1 (MQ=255) cATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTGAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAgcg > 2:1911284/1‑150 (MQ=255) tGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGcagt > 1:3382475/1‑150 (MQ=255) gCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGcagtct < 2:1654803/150‑2 (MQ=255) cgcgGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGcagtcagt > 1:2271308/1‑150 (MQ=255) ggcgAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAgcggcg < 1:2299847/98‑1 (MQ=255) ggcgAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCCCGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCa < 2:845341/150‑1 (MQ=255) gcgAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAg < 1:1848285/150‑1 (MQ=255) aaaTCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTGACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCa > 1:3162365/1‑150 (MQ=255) aaTCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCAt > 1:1090438/1‑150 (MQ=255) aTCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATc > 1:399824/1‑150 (MQ=255) cacaGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCt < 1:1276619/150‑1 (MQ=255) caGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGc < 2:1260861/150‑1 (MQ=255) aGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGcc > 1:1142991/1‑150 (MQ=255) cAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCg > 2:347308/1‑150 (MQ=255) aGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCTGCCATCCCTGCCCCgg > 2:3989120/1‑150 (MQ=255) aGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCgg < 1:4197145/150‑1 (MQ=255) tCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGaa < 2:3070871/150‑1 (MQ=255) cGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAg > 1:2811772/1‑150 (MQ=255) cGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAg > 2:2369676/1‑150 (MQ=255) cAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTa < 1:851084/150‑1 (MQ=255) aGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTaa > 2:3532207/1‑150 (MQ=255) aGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTaa < 1:199136/150‑1 (MQ=255) tAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATg < 2:3196989/150‑1 (MQ=255) tAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATg < 2:2825389/150‑1 (MQ=255) aGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCt > 1:1334911/1‑150 (MQ=255) ggCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCtt < 2:1008851/150‑1 (MQ=255) gCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCCCGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCttt < 2:3021039/150‑1 (MQ=255) gCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCttt > 2:628540/1‑150 (MQ=255) cATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCtttt < 2:1588552/150‑1 (MQ=255) aTCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTa > 1:2630661/1‑150 (MQ=255) cACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTAcc < 2:171458/150‑1 (MQ=255) cAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCACGCGGCGGATCCCTTCACGTTTCAGTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCaaaa > 2:1748964/1‑150 (MQ=255) cAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCaaaa > 2:494699/1‑150 (MQ=255) cAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCaaaa > 1:2618946/1‑150 (MQ=255) cAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCaaaa > 2:847482/1‑150 (MQ=255) aCTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGt < 2:3209843/150‑1 (MQ=255) cTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTa > 2:4166106/1‑150 (MQ=255) tAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCGGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTAta > 2:2953290/1‑149 (MQ=255) agagTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGc < 2:2937136/150‑1 (MQ=255) gagTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCa < 2:1427171/150‑1 (MQ=255) agTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCAt < 1:3301502/150‑1 (MQ=255) agTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCATTTACCAAAAGTATTGCAt < 2:1226256/150‑1 (MQ=255) tATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATtg < 1:2458401/150‑1 (MQ=255) aTGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATtgt < 1:3870132/150‑1 (MQ=255) aTGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATtgt < 1:3870184/150‑1 (MQ=255) cTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGcc < 2:4208084/150‑1 (MQ=255) cTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGcc < 2:3443581/150‑1 (MQ=255) cTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGcc > 1:1841862/1‑150 (MQ=255) tCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCg < 1:3103976/150‑1 (MQ=255) aaaaCACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGa > 2:4011838/1‑150 (MQ=255) aaCACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATc > 1:3613597/1‑150 (MQ=255) aaCACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATc > 2:3151218/1‑150 (MQ=255) ccAACCCTCTTCCCCGCTCAACACAAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATcgccg < 1:1492485/150‑1 (MQ=255) aaCCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCt > 2:1180/1‑150 (MQ=255) cccTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGt < 1:2156955/150‑1 (MQ=255) cccTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGt < 1:636425/150‑1 (MQ=255) ctctTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCg < 2:3760145/150‑1 (MQ=255) tctTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCGa > 2:1042613/1‑150 (MQ=255) ttCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCGaaa < 2:3718885/150‑1 (MQ=255) tCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCGAAAc > 1:1549634/1‑150 (MQ=255) ccccGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCGAAAcc > 2:3374815/1‑150 (MQ=255) ccGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCGAAACCAc > 2:2625834/1‑150 (MQ=255) tCAACACCAGCAAGCGGCGGATCCCTTCACGGTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGGCGAAACCACGtgt > 2:2046544/1‑148 (MQ=255) | AACTCGCGCCCAAGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGCAACTTAAGAGTATGCTCAAAACACCAACCCTCTTCCCCGCTCAACACCAGCAAGCGGCGGATCCCTTCACGTTTCATTTGCGCTGTTAATGTGTGAAGCGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGTTAAATGCTTTTACCAAAAGTATTGCATTGTGCCGGATCGCCGCTGTCGAAACCACGTTTAAACCAG > CP009273/2589001‑2589299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |