Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,693,726 C→T 13.5% intergenic (‑170/‑153) shoB ← / → ohsC toxic membrane protein/sRNA antisense regulator of shoB toxin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,693,7260CT13.5% 737.8 / 86.4 252intergenic (‑170/‑153)shoB/ohsCtoxic membrane protein/sRNA antisense regulator of shoB toxin
Reads supporting (aligned to +/- strand):  ref base C (95/122);  new base T (18/16);  total (113/139)
Fisher's exact test for biased strand distribution p-value = 3.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 258 total aligned reads displayed.

AATGCAGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCT  >  CP009273/2693577‑2693875
                                                                                                                                                     |                                                                                                                                                     
aaTGCAGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATc                                                                                                                                                       <  2:3318304/150‑1 (MQ=255)
aaTGCAGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATc                                                                                                                                                       <  2:787902/150‑1 (MQ=255)
aaTGCAGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATc                                                                                                                                                       >  1:799757/1‑150 (MQ=255)
  tGCAGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCtt                                                                                                                                                     <  2:1141902/150‑1 (MQ=255)
     aGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCaa                                                                                                                                                  >  1:650934/1‑150 (MQ=255)
     aGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCaa                                                                                                                                                  >  2:4451173/1‑150 (MQ=255)
       ccATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATa                                                                                                                                                <  2:3857921/150‑1 (MQ=255)
       ccATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATa                                                                                                                                                >  2:888631/1‑150 (MQ=255)
        cATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGACTTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATaa                                                                                                                                               >  2:526465/1‑150 (MQ=255)
        cATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATaa                                                                                                                                               <  2:589740/150‑1 (MQ=255)
         aTTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAAc                                                                                                                                              >  1:3136047/1‑150 (MQ=255)
             aGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAg                                                                                                                                          <  1:4066202/150‑1 (MQ=255)
             aGATTAGCCCGTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAg                                                                                                                                          <  2:4418800/150‑1 (MQ=255)
              gaatAGCCCTTACAACTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGc                                                                                                                                         <  2:2950764/147‑1 (MQ=255)
               aTTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGcc                                                                                                                                        >  2:835134/1‑150 (MQ=255)
               aTTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGcc                                                                                                                                        <  2:4322925/150‑1 (MQ=255)
               aTTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCGTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGcc                                                                                                                                        >  2:1268035/1‑150 (MQ=255)
                   gCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGGCGACACCACTCGTTTCAATGGGGGACTTCTGTGGCAGGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAAtt                                                                                                                                    >  1:3289158/1‑150 (MQ=255)
                   gCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCGAAtt                                                                                                                                    <  2:61911/150‑1 (MQ=255)
                    cccTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAAttt                                                                                                                                   <  2:734439/150‑1 (MQ=255)
                      cTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTa                                                                                                                                 <  1:2669102/150‑1 (MQ=255)
                       ttACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACACCACACCAGAGCTAGGGCGACCCAAATAGATACATTGGCGGAAATAACTGTCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATGTTaa                                                                                                                                >  1:1085416/1‑150 (MQ=255)
                          cATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGt                                                                                                                             <  1:2706182/150‑1 (MQ=255)
                           aTCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTa                                                                                                                            <  1:32199/150‑1 (MQ=255)
                           aTCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTa                                                                                                                            >  2:3624254/1‑150 (MQ=255)
                            tctcCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAATATCTTCAATAACGAAGCCAATTTTAATGTAc                                                                                                                           >  1:370740/1‑150 (MQ=255)
                            tctcCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTAc                                                                                                                           <  2:2645022/150‑1 (MQ=255)
                             ctcCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACt                                                                                                                          >  1:2737609/1‑150 (MQ=255)
                               ccccAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTa                                                                                                                        >  1:1973212/1‑150 (MQ=255)
                               ccccAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTa                                                                                                                        <  2:2989816/150‑1 (MQ=255)
                                cccAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTAc                                                                                                                       <  1:2883841/150‑1 (MQ=255)
                                cccAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTAc                                                                                                                       <  1:510781/150‑1 (MQ=255)
                                 ccAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACg                                                                                                                      <  2:960946/150‑1 (MQ=255)
                                 ccAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACg                                                                                                                      <  2:4154476/150‑1 (MQ=255)
                                 ccAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACg                                                                                                                      <  2:1879693/150‑1 (MQ=255)
                                  cAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGa                                                                                                                     >  2:2287236/1‑150 (MQ=255)
                                  cAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTAAGa                                                                                                                     >  2:2995759/1‑150 (MQ=255)
                                  cAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAAGGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGa                                                                                                                     >  2:3958296/1‑150 (MQ=255)
                                   aaaaCTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATATTAATGTACTTACGaa                                                                                                                    >  2:4300150/1‑150 (MQ=255)
                                    aaaCTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAAt                                                                                                                   <  1:1589634/150‑1 (MQ=255)
                                      aCTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTg                                                                                                                 <  1:3390489/150‑1 (MQ=255)
                                       cTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCACTTTTAATGTACTTACGAATTgg                                                                                                                >  1:3793346/1‑150 (MQ=255)
                                       cTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTgg                                                                                                                <  1:3585281/150‑1 (MQ=255)
                                        tGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGc                                                                                                               <  2:1458664/150‑1 (MQ=255)
                                        tGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGc                                                                                                               >  2:642012/1‑150 (MQ=255)
                                         gAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCg                                                                                                              <  2:3157300/150‑1 (MQ=255)
                                         gAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCg                                                                                                              <  2:3741888/150‑1 (MQ=255)
                                         gAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCg                                                                                                              >  1:284975/1‑150 (MQ=255)
                                             gTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCa                                                                                                          <  1:206093/150‑1 (MQ=255)
                                             gTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCa                                                                                                          >  2:350634/1‑150 (MQ=255)
                                              tGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCAc                                                                                                         >  1:1783916/1‑150 (MQ=255)
                                              tGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCAc                                                                                                         >  1:316741/1‑150 (MQ=255)
                                               gCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACg                                                                                                        >  2:4169416/1‑150 (MQ=255)
                                                   gTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTaa                                                                                                    <  2:146929/150‑1 (MQ=255)
                                                      aTTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCt                                                                                                 >  2:2107833/1‑150 (MQ=255)
                                                      aTTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCt                                                                                                 <  2:2485856/150‑1 (MQ=255)
                                                       ttGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCtt                                                                                                <  1:888631/150‑1 (MQ=255)
                                                        tGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCttt                                                                                               <  1:1207387/150‑1 (MQ=255)
                                                          aGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTcc                                                                                             <  1:3101486/150‑1 (MQ=255)
                                                           gggTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCa                                                                                            <  2:2881072/150‑1 (MQ=255)
                                                                 aTGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAata                                                                                      <  2:4034891/150‑1 (MQ=255)
                                                                 aTGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAata                                                                                      >  2:424858/1‑150 (MQ=255)
                                                                  tgctgcACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAatat                                                                                     <  1:3266577/150‑1 (MQ=255)
                                                                   gctgcACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATAtt                                                                                    <  2:2802861/150‑1 (MQ=255)
                                                                   gctgcACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATAtt                                                                                    <  2:3864763/150‑1 (MQ=255)
                                                                      gcACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCt                                                                                 >  2:455041/1‑150 (MQ=255)
                                                                           ccACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTttctt                                                                            <  2:2213989/150‑1 (MQ=255)
                                                                               acCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTa                                                                        >  2:2590546/1‑150 (MQ=255)
                                                                               acCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTa                                                                        <  2:4099732/150‑1 (MQ=255)
                                                                               acCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTa                                                                        <  2:3132888/150‑1 (MQ=255)
                                                                                  agagCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAg                                                                     >  1:4137997/1‑150 (MQ=255)
                                                                                    agCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGc                                                                   >  1:168506/1‑150 (MQ=255)
                                                                                     gCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCt                                                                  <  2:2721528/150‑1 (MQ=255)
                                                                                     gCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCt                                                                  <  1:513343/150‑1 (MQ=255)
                                                                                        ttGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGa                                                               <  2:3569600/150‑1 (MQ=255)
                                                                                          gacgacACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGt                                                             >  1:4016501/1‑150 (MQ=255)
                                                                                          gacgacACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGt                                                             <  2:2842795/150‑1 (MQ=255)
                                                                                            cgacACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGttt                                                           <  1:1757036/150‑1 (MQ=255)
                                                                                                 ccacTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATg                                                      <  2:1561892/150‑1 (MQ=255)
                                                                                                  cacTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGc                                                     <  1:966780/150‑1 (MQ=255)
                                                                                                    cTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTa                                                   <  2:1641385/150‑1 (MQ=255)
                                                                                                     tCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTaa                                                  <  1:227388/150‑1 (MQ=255)
                                                                                                      cGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATTTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTaaa                                                 >  1:4408486/1‑150 (MQ=255)
                                                                                                       gTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAg                                                >  1:3482590/1‑150 (MQ=255)
                                                                                                       gTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAg                                                <  2:3128961/150‑1 (MQ=255)
                                                                                                          tCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGAtt                                             <  1:604646/150‑1 (MQ=255)
                                                                                                           cAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTg                                            <  2:3394224/150‑1 (MQ=255)
                                                                                                             aTGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCa                                          <  2:1749741/150‑1 (MQ=255)
                                                                                                                 gggAATTCTGTTGCATGGTGTAAAGCACAGCAAAATCTTCAATAAAGAAGCCAATTTTAATGTACTTACGATTTGGCGGTCACGTTAATCTTTCCATCATTATTGCTTTCTTCGTAAAGGATCGAGTTTTTATGCTAAAGATTGCAAGtt                                      <  1:3737377/150‑1 (MQ=255)
                                                                                                                   gAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGc                                    >  2:3945727/1‑150 (MQ=255)
                                                                                                                         tgtgGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTaa                              <  2:3251037/150‑1 (MQ=255)
                                                                                                                                tGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATaa                       <  1:2104842/150‑1 (MQ=255)
                                                                                                                                        aGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTg               <  1:4451173/150‑1 (MQ=255)
                                                                                                                                        aGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTg               >  2:1279745/1‑150 (MQ=255)
                                                                                                                                          cacaGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGAt             >  2:669850/1‑150 (MQ=255)
                                                                                                                                           acaGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATc            <  1:748779/150‑1 (MQ=255)
                                                                                                                                            caGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATcc           >  1:1363115/1‑150 (MQ=255)
                                                                                                                                               cAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATa        >  1:1373582/1‑150 (MQ=255)
                                                                                                                                                  aaTCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATc     <  1:1468172/150‑1 (MQ=255)
                                                                                                                                                    tCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGc   >  1:4309360/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AATGCAGCCATTCAGATTAGCCCTTACATCTCCCCAAAACTGAACGTGCGAGTTATTGAGGGTGCATGCTGCACTCCACACCAGAGCTTTGACGACACCACTCGTTTCAATGGGGGAATTCTGTGGCATGGTGTAAAGCACAGCAAAATCTTCAATAACGAAGCCAATTTTAATGTACTTACGAATTGGCGGTCACGTTAATCTTTCCATCAATATTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCT  >  CP009273/2693577‑2693875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: