| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,733,461 | T→A | 18.6% | Q350L (CAG→CTG) | aroF ← | 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,733,461 | 0 | T | A | 18.6% | 640.5 / 146.1 | 258 | Q350L (CAG→CTG) | aroF | 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible |
| Reads supporting (aligned to +/- strand): ref base T (106/104); new base A (31/17); total (137/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.08e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.90e-01 | |||||||||||
Only 100 of 260 total aligned reads displayed.
GCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTCGATCATC > CP009273/2733312‑2733610 | gCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCt < 1:4024535/150‑1 (MQ=255) cGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTg > 2:1440685/1‑150 (MQ=255) cGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTg > 1:1922004/1‑150 (MQ=255) cGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTg < 1:2181464/150‑1 (MQ=255) cTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGccc < 2:1941826/150‑1 (MQ=255) ccTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGa > 2:2440221/1‑150 (MQ=255) cGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATcc < 2:712242/150‑1 (MQ=255) cGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATcc < 1:1681091/150‑1 (MQ=255) cGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATcc < 2:3645836/150‑1 (MQ=255) cTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCtgatga < 2:454765/150‑1 (MQ=255) cTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCtgatga > 1:3627352/1‑150 (MQ=255) ttCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGaa > 2:3222711/1‑150 (MQ=255) tCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAAt > 2:156158/1‑150 (MQ=255) cAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAAtt < 1:265214/150‑1 (MQ=255) cAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTCATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAAtt < 1:829966/150‑1 (MQ=255) aGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAAttt > 2:782056/1‑150 (MQ=255) aaCCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCAc > 2:3677757/1‑150 (MQ=255) aaCCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCAc < 1:1218268/150‑1 (MQ=255) aCCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACg < 1:4333864/150‑1 (MQ=255) aGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACgcag > 1:3858397/1‑150 (MQ=255) ttCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACgcagca > 1:3515905/1‑150 (MQ=255) tCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCaa < 2:385819/150‑1 (MQ=255) cAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAgg < 1:917233/150‑1 (MQ=255) cAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAgg > 1:2365703/1‑150 (MQ=255) aGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGc > 2:3814568/1‑150 (MQ=255) aCGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCAt < 1:4514446/150‑1 (MQ=255) gCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCg < 1:2709453/150‑1 (MQ=255) ttCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGt > 1:4270323/1‑150 (MQ=255) cTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCAtt > 2:4507507/1‑150 (MQ=255) ataaATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTcc > 2:4359615/1‑150 (MQ=255) taaATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATCAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTccc < 2:1070994/150‑1 (MQ=255) aaaTTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCa > 1:1366648/1‑150 (MQ=255) aaTTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAg < 2:2598659/150‑1 (MQ=255) aTTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGc > 2:3152095/1‑150 (MQ=255) agcagcGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCTAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCACAGCTAAt > 2:427955/1‑150 (MQ=255) agcagcGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAAt < 1:3768763/150‑1 (MQ=255) agcagcGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAAt < 2:182386/150‑1 (MQ=255) agcagcGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAAt < 1:2930548/150‑1 (MQ=255) cagcGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGc > 2:1077106/1‑150 (MQ=255) gcgcTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAACCCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAg < 1:3747667/150‑1 (MQ=255) cgcTTTATCGACTTCATCAATTTGATCGCGTAAGGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAgg < 1:3190764/150‑1 (MQ=255) gcTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGc < 2:4145872/150‑1 (MQ=255) tttATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCAt < 2:235195/150‑1 (MQ=255) ttATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATc < 2:343263/150‑1 (MQ=255) tATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCg < 1:1876159/150‑1 (MQ=255) aTCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCgg > 2:2846807/1‑150 (MQ=255) cGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGtt < 1:3620157/150‑1 (MQ=255) gACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTa < 2:2564071/150‑1 (MQ=255) gACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTa < 2:2033566/150‑1 (MQ=255) cTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACg < 2:3381519/150‑1 (MQ=255) ttCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACgg > 1:4168240/1‑150 (MQ=255) tcaATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATac < 2:1254183/150‑1 (MQ=255) aaTTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCCTCGGTTACGGATacac > 1:2295037/1‑150 (MQ=255) aaTTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATacac > 2:3504714/1‑150 (MQ=255) aaTTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATacac > 2:2062674/1‑150 (MQ=255) aaTTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATacac > 2:2530843/1‑150 (MQ=255) tttGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCg > 1:572944/1‑150 (MQ=255) gATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAAGTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTat > 2:3326748/1‑150 (MQ=255) aTCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTatt > 1:1684907/1‑150 (MQ=255) aTCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTatt < 2:3741514/150‑1 (MQ=255) cgcgTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTatttc < 2:319271/150‑1 (MQ=255) cgTAATGCTGTCAATTCAGCAACCATAATAAACCTCATAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCAATTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTatttcat > 1:2837904/1‑150 (MQ=255) gTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTatttcatt > 1:806293/1‑150 (MQ=255) aaTGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTatttcatttc > 1:2870630/1‑150 (MQ=255) gCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACt > 2:2318929/1‑150 (MQ=255) gTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTgcg > 2:3105406/1‑150 (MQ=255) tCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTgcgc > 1:499215/1‑150 (MQ=255) cAATTCAGCAACCATAATAACCCTCGTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGcgcg < 2:3892649/150‑1 (MQ=255) cAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGcgcg > 2:954038/1‑150 (MQ=255) cAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGcgcg > 2:2915890/1‑150 (MQ=255) tCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTg < 2:2284705/150‑1 (MQ=255) aGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCt > 2:2269271/1‑150 (MQ=255) aGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCt > 2:2976567/1‑150 (MQ=255) aCCATAATAAACCTCTTAAGCCACGCGATCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTAACTGCGCGGTTGCTCGGa > 2:4491180/1‑150 (MQ=255) cATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAg > 1:2343057/1‑150 (MQ=255) ataaACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTg > 2:4015117/1‑150 (MQ=255) ataaACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTg > 1:3784981/1‑150 (MQ=255) taaACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGa > 1:3330374/1‑150 (MQ=255) aaaCCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGAt < 1:3709849/150‑1 (MQ=255) aaaCCTCTTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGAt > 1:1760538/1‑150 (MQ=255) aaCCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGCAGACTGAtt > 2:2796198/1‑150 (MQ=255) aaCCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGAtt > 2:563618/1‑150 (MQ=255) aaCCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGAtt < 1:1440685/150‑1 (MQ=255) aCCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTg > 1:3016493/1‑150 (MQ=255) ccTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGc > 2:1670540/1‑150 (MQ=255) ctTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCt < 1:2119525/150‑1 (MQ=255) ctTAAGCCACGCGAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCt > 1:610107/1‑150 (MQ=255) gCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTgg > 1:2508713/1‑150 (MQ=255) gCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTgg < 2:64586/150‑1 (MQ=255) gcgAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATAtt < 2:322884/150‑1 (MQ=255) cgAGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTa > 2:524970/1‑150 (MQ=255) gAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTAc > 2:3255732/1‑150 (MQ=255) aGCCGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACt > 1:3301701/1‑150 (MQ=255) ccGTCAGCAGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACttt < 1:779335/150‑1 (MQ=255) cGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTc < 1:3677757/150‑1 (MQ=255) cGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTc < 1:394094/150‑1 (MQ=255) cGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTc > 2:863302/1‑150 (MQ=255) gTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTCg < 1:106291/150‑1 (MQ=255) gCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTCGatca < 2:2797068/150‑1 (MQ=255) cTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTCGatcat < 2:2421923/150‑1 (MQ=255) | GCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGCGCTTTATCGACTTCATCAATTTGATCGCGTAATGCGGTCAATTCAGCAACCATAATAAACCTCTTAAGCCACGCGAGCCGTCAGCTGCCCGTTCAGATCCTGATGAATTTCACGCAGCAAGGCATCGGTCATTTCCCAGCTAATGCAGGCATCGGTTACGGATACACCGTATTTCATTTCACTGCGCGGTTGCTCGGAAGACTGATTGCCCTCGTGGATATTACTTTCGATCATC > CP009273/2733312‑2733610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |