| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,872,873 | C→A | 5.0% | A87S (GCT→TCT) | ygbT ← | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,872,873 | 0 | C | A | 5.0% | 892.6 / 2.2 | 266 | A87S (GCT→TCT) | ygbT | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Reads supporting (aligned to +/- strand): ref base C (145/95); new base A (2/24); total (147/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.94e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 270 total aligned reads displayed.
TTGCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCT > CP009273/2872724‑2873022 | ttGCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGc > 2:690759/1‑150 (MQ=255) gCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCAt < 1:1318082/150‑1 (MQ=255) tACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAac < 1:3404685/150‑1 (MQ=255) cGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAacac < 2:1795497/150‑1 (MQ=255) cGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAacac > 1:4478912/1‑150 (MQ=255) gcgcCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAAc < 1:3516769/150‑1 (MQ=255) cgcCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACg > 2:2030643/1‑150 (MQ=255) cgcCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACg < 1:3833347/150‑1 (MQ=255) cgcCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACg < 2:4174533/150‑1 (MQ=255) gcCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGc > 2:4286942/1‑150 (MQ=255) cAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCtt < 2:2951288/150‑1 (MQ=255) aGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTc > 1:1143372/1‑150 (MQ=255) aGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTc > 1:3836253/1‑150 (MQ=255) gcAGGTACTCCAAACCGAAGTTAAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTccccc < 2:2786470/150‑1 (MQ=255) aGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCcccac > 2:40749/1‑150 (MQ=255) gTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCcccaccc > 2:4353957/1‑150 (MQ=255) gTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCcccaccc > 1:2278934/1‑150 (MQ=255) ttCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCcccaccca > 1:4143863/1‑150 (MQ=255) cAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACca > 2:3140327/1‑150 (MQ=255) aCCGAAGTTCAAACATTTTACGTACGACCTTCAGACGAAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTTAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACcaaca < 2:3066538/150‑1 (MQ=255) ccGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCCGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACcaacaa > 2:3412688/1‑150 (MQ=255) cGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCTGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAAt < 2:2134124/150‑1 (MQ=255) gAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGACGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATg > 2:3342777/1‑150 (MQ=255) aGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGtt > 1:875353/1‑150 (MQ=255) ttCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTcc > 1:4219293/1‑150 (MQ=255) tCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCa < 2:2807936/150‑1 (MQ=255) cAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCaa > 2:2264236/1‑150 (MQ=255) aaaCATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAAc > 2:194142/1‑150 (MQ=255) aaaCATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAAc > 1:3722190/1‑150 (MQ=255) aaatttttACTTACGACTTTAAGACGAAAATATTAATCATTAGAATTTTTTGCTTGATTTAGATGATTATCTGAACGCGCACATCCAGGCTGACATGAAGAATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACt < 1:3803461/146‑1 (MQ=255) aaCATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACt > 1:2777831/1‑150 (MQ=255) aCATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACtt > 2:1169789/1‑150 (MQ=255) tacgtacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAg > 2:608635/1‑150 (MQ=255) acgtacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTAGCCTGATAGAGCAGCTTATCTGAACGCGAACCTCCAGTCTGACCAGAAGAATAAACACGAACGCCCGCTAACCCCACCCATACCAACAATGTTACAACTTGCGCAGc > 2:3918897/1‑150 (MQ=255) cgtacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGcc > 1:279838/1‑150 (MQ=255) gtacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCa > 2:4497687/1‑150 (MQ=255) tacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATATAGAAGCTTATCTGAACGCGCACCTCCTGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAg < 2:1201118/150‑1 (MQ=255) acgACCTTCAGACGAAAATCTTCATCAAGAGCAATTTTTGCCTGATAGAGCATCTTATCTGAACGCGCACCTCCAGGCTGACCATAAGAATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAgg < 1:1317119/150‑1 (MQ=255) cgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGTCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGc > 1:4034833/1‑150 (MQ=255) gACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCg > 2:1327170/1‑150 (MQ=255) gACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCg > 2:2678858/1‑150 (MQ=255) aCCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGt > 1:1880446/1‑150 (MQ=255) ccTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTa > 1:2081800/1‑150 (MQ=255) tCAGACGAAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGATTATCTGAACGCGCACCTCCCGGCTGACCAGAAGAATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAg < 1:3560223/150‑1 (MQ=255) aGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCt < 2:2528632/150‑1 (MQ=255) gCAAATCTTCATCCAGAGCTAGTTTTGCCTGATATAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCAt < 2:4421306/150‑1 (MQ=255) ttCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAc > 2:4256537/1‑150 (MQ=255) ttCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAc > 2:2710619/1‑150 (MQ=255) cATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAccc > 1:172334/1‑150 (MQ=255) ccAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCgtg > 1:4166466/1‑150 (MQ=255) cAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCgtgt < 1:3673439/150‑1 (MQ=255) agagCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTa > 2:2493990/1‑150 (MQ=255) gagCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTAc > 2:1306799/1‑150 (MQ=255) agCATGTTTTGCCTGATATAGCAGTTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGAAAAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTAcc < 1:1173128/150‑1 (MQ=255) cAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTCCCAg > 2:3787982/1‑150 (MQ=255) cAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAg > 1:2882094/1‑150 (MQ=255) aaGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAgg < 2:893900/150‑1 (MQ=255) aGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGt > 1:3017416/1‑150 (MQ=255) gTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGtt < 2:324386/150‑1 (MQ=255) ttttGCCTTATAGAGCTGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGAATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTc < 1:1972941/150‑1 (MQ=255) ttttGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTc < 2:220101/150‑1 (MQ=255) tttGCCTGATAGAGCAGATTATCTGAACGCGCACCTCCCGGCTGACCAGAAGCATAAACACGCACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTcc < 1:3884106/150‑1 (MQ=255) gCCTGATATAGCAGATTATCTGAACGCGCACCTCCTGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGc < 1:2243319/150‑1 (MQ=255) gCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGc < 1:4443635/150‑1 (MQ=255) cTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCat > 2:1501499/1‑150 (MQ=255) tGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCatg < 2:983045/150‑1 (MQ=255) tGATAGAGCAGATTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCatg < 2:1811880/150‑1 (MQ=255) agagCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGc > 1:2347545/1‑150 (MQ=255) gagCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCa > 1:2073846/1‑150 (MQ=255) gagCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCa > 1:3628700/1‑150 (MQ=255) agcagcTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAg > 1:4354992/1‑150 (MQ=255) ttATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAAcc > 2:3199921/1‑150 (MQ=255) ttATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAAcc > 2:732679/1‑150 (MQ=255) ttATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAAcc < 1:4144490/150‑1 (MQ=255) tATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCg > 1:3593129/1‑150 (MQ=255) cTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGc > 1:3281486/1‑150 (MQ=255) cTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGc < 1:3130724/150‑1 (MQ=255) tGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGcc < 1:664894/150‑1 (MQ=255) tGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGcc > 1:1506769/1‑150 (MQ=255) aaCGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCaa < 2:3472492/150‑1 (MQ=255) cACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGac > 1:783169/1‑149 (MQ=255) cACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGaa < 1:700557/150‑1 (MQ=255) aCCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAat < 1:1400509/150‑1 (MQ=255) aCCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCAGACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAat < 1:3072398/150‑1 (MQ=255) ccTCCAGGCTGACCAGAAGCATAAACACGCACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAata < 1:4313730/150‑1 (MQ=255) ccTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAata > 1:589318/1‑150 (MQ=255) cTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAatat < 2:2370807/150‑1 (MQ=255) aGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGt > 2:2842117/1‑150 (MQ=255) aGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGt > 2:538806/1‑150 (MQ=255) ggCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTg < 1:1024419/150‑1 (MQ=255) ggCTGACCAGAAGAATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTg < 1:1623889/150‑1 (MQ=255) tGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCgg > 1:3924016/1‑150 (MQ=255) tGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCgg > 2:2351099/1‑150 (MQ=255) ccAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATc < 2:3682024/150‑1 (MQ=255) cAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATcc > 1:1891777/1‑150 (MQ=255) aGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATccc > 1:3376889/1‑150 (MQ=255) gAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCt < 2:3628700/150‑1 (MQ=255) aGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGt < 1:2462618/150‑1 (MQ=255) gCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTc < 1:1805509/150‑1 (MQ=255) cATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCt < 1:2549756/150‑1 (MQ=255) | TTGCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCT > CP009273/2872724‑2873022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |