| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,945,504 | C→A | 16.5% | R106L (CGT→CTT) | recD ← | exonuclease V (RecBCD complex), alpha chain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,945,504 | 0 | C | A | 16.5% | 790.8 / 105.3 | 259 | R106L (CGT→CTT) | recD | exonuclease V (RecBCD complex), alpha chain |
| Reads supporting (aligned to +/- strand): ref base C (107/109); new base A (21/22); total (128/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
CTTTTTGCCAGTTAATTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCAGTCGT > CP009273/2945355‑2945653 | cTTTTTGCCAGTTAATTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAc > 1:1411078/1‑150 (MQ=255) ttttGCCAGTTAATTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGa < 1:3129560/150‑1 (MQ=255) tGCCAGTTAATTTCATCGCTTACTGGAGAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCg < 1:2538994/150‑1 (MQ=255) tGCCAGTTAATTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCg < 1:1110436/150‑1 (MQ=255) ccAGTTAATTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGcc < 1:3445345/150‑1 (MQ=255) aGTTAATTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCcac > 1:2952998/1‑150 (MQ=255) aaTTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGAGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTACGTTGAAAAAGCGAGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGACACagag > 1:782168/1‑150 (MQ=255) aTTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAgg > 2:1004940/1‑150 (MQ=255) tttCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGa < 1:1198843/150‑1 (MQ=255) tCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGatc < 2:844610/150‑1 (MQ=255) tCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGatc < 1:280415/150‑1 (MQ=255) cATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGatca < 1:4227422/150‑1 (MQ=255) aTCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGatcat < 1:2009049/150‑1 (MQ=255) tCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGatcatc > 1:1858659/1‑150 (MQ=255) cGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCg < 1:4283874/150‑1 (MQ=255) cGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCg > 1:1457327/1‑150 (MQ=255) gCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCgg < 1:259309/150‑1 (MQ=255) cTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGc > 2:2367857/1‑150 (MQ=255) ttACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCg > 2:2531244/1‑150 (MQ=255) gAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGtt > 1:2055926/1‑150 (MQ=255) gAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGtt > 2:3694279/1‑150 (MQ=255) aaaaaGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTc < 2:2513696/150‑1 (MQ=255) aaGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCAtc < 1:4061326/150‑1 (MQ=255) aGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCAtct > 2:2632736/1‑150 (MQ=255) aGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCAtct > 2:5582/1‑150 (MQ=255) gTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCAtctc > 1:1665332/1‑150 (MQ=255) gTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCAtctc > 1:4535698/1‑150 (MQ=255) tttGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTcc > 1:1734488/1‑150 (MQ=255) cAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCctgct < 1:17859/150‑1 (MQ=255) aGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCctgctg > 2:1444591/1‑150 (MQ=255) ggTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGAc < 2:347552/150‑1 (MQ=255) gTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGAcc > 2:990739/1‑150 (MQ=255) tttGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCg < 2:3888515/150‑1 (MQ=255) tGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCt < 1:3667397/150‑1 (MQ=255) tGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCt < 1:3728368/150‑1 (MQ=255) tGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCt > 2:3771766/1‑150 (MQ=255) ccAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTgag > 1:3440015/1‑150 (MQ=255) cAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTgaga > 2:71379/1‑150 (MQ=255) gagCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCa > 1:3818886/1‑150 (MQ=255) gagCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCa < 1:3221283/150‑1 (MQ=255) agCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCag > 2:2911925/1‑150 (MQ=255) tcatcaACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCagcaag > 2:2837422/1‑150 (MQ=255) tcatcaACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCagcaag > 2:2236002/1‑150 (MQ=255) catcaACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCagcaagc < 1:3467603/150‑1 (MQ=255) atcaACCTCAATGTCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCagcaagca < 1:2096599/150‑1 (MQ=255) atcaACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCagcaagca < 2:4273762/150‑1 (MQ=255) aaCCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCAttc > 1:2951320/1‑150 (MQ=255) ccTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCAttctt > 2:4512167/1‑150 (MQ=255) cTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCAttcttc < 2:3536620/150‑1 (MQ=255) tCAATGGCATGATTCACTTCGTCGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTcc > 2:1669473/1‑150 (MQ=255) cAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTccc > 1:2525598/1‑150 (MQ=255) aaTGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCa < 2:2405216/150‑1 (MQ=255) ggCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAATCCAGCAAGCATTCTTCCCAAtt > 2:1471226/1‑150 (MQ=255) cACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTc > 2:416283/1‑150 (MQ=255) cACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTc < 2:1679410/150‑1 (MQ=255) ttCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCAcc < 2:2037370/150‑1 (MQ=255) cGTTG‑AAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGAt > 2:1093449/1‑150 (MQ=255) tGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGAttt > 2:1968176/1‑150 (MQ=255) aaaaGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCAc > 2:4120/1‑150 (MQ=255) aaaaGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCAc < 2:2659/150‑1 (MQ=255) aaaGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGAttt < 1:451130/146‑1 (MQ=255) aaaGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGAttt < 1:451292/146‑1 (MQ=255) gCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATAATCGGCTAGGGTTCATCACCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTACCCAATTATGTAGCTCACCGATTTCACAGACACAg > 2:2540647/1‑150 (MQ=255) cACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGt < 1:3694279/150‑1 (MQ=255) aCTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTc < 2:391587/150‑1 (MQ=255) gtgCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGcc > 1:868635/1‑150 (MQ=255) cgcTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAAc < 2:4081157/150‑1 (MQ=255) cGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCg > 1:949606/1‑150 (MQ=255) gTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACAGATTTAACTGACACAGGTCGCCAACAGCgg > 1:2649883/1‑150 (MQ=255) ttACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGa > 1:2330529/1‑150 (MQ=255) ttACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGa > 1:64059/1‑150 (MQ=255) ttACACCACATGCAATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGa > 1:303182/1‑150 (MQ=255) ttACACCACAGGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGa < 2:4021612/150‑1 (MQ=255) tACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGAt < 2:1809623/150‑1 (MQ=255) tACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGAt < 2:3150547/150‑1 (MQ=255) ccacATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGa < 2:1730296/150‑1 (MQ=255) cacaTGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGAc < 2:1408598/150‑1 (MQ=255) cacaTGCGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGAc < 1:2841172/150‑1 (MQ=255) caTGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGc > 2:2622801/1‑150 (MQ=255) aTGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGcc < 1:2701987/150‑1 (MQ=255) cGATTCAAATAACGCCGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCg < 1:2434530/150‑1 (MQ=255) cGATTCAAATAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCg > 2:2571862/1‑150 (MQ=255) aTTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGtt < 2:2709115/150‑1 (MQ=255) tCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTAt < 1:1004940/150‑1 (MQ=255) tCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTAt < 1:5582/150‑1 (MQ=255) gaaTAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTTACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGCTGCGACGCCTCGTTAttt > 1:4240640/2‑150 (MQ=255) aaaTAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTAttt > 1:4112607/1‑150 (MQ=255) aaaTAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATATTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTAttt > 1:1304953/1‑150 (MQ=255) aaaTAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTAttt < 1:3158952/150‑1 (MQ=255) aaaTAAAGAAGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTAttt < 1:892198/150‑1 (MQ=255) aTAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTc < 1:2911925/150‑1 (MQ=255) aTAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTc > 1:3672834/1‑150 (MQ=255) tAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTcc > 2:4279583/1‑150 (MQ=255) tAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTcc > 2:4360224/1‑150 (MQ=255) aaaGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCa > 2:3667495/1‑150 (MQ=255) aaaGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCa < 2:4535698/150‑1 (MQ=255) aaaGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCa < 2:1665301/150‑1 (MQ=255) aaGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCAg < 1:3916325/150‑1 (MQ=255) agaagaTCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCAGt < 1:195267/150‑1 (MQ=255) gACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCAGTc > 1:1085271/1‑150 (MQ=255) | CTTTTTGCCAGTTAATTTCATCGCTTACTGGAAAAAGTTTGTCCAGGGTTTGCGCCAGTAGAGCTTCATCAACCTCAATGGCATGATTCACTTCGTTGAAAAAGCGTGCCACTGTGCGCTCGTTACACCACATGCGATTCAAATAAAGACGATCGCCACAGAGGATCATCGGCGTGGGTTCATCTCCCCTGCTGACCGCTTGAGAAGCCAGCAAGCATTCTTCCCAATTTTGTAGCTCACCGATTTCACTGACACAGGTCGCCAACAGCGGATGCGACGCCTCGTTATTTTCCAGTCGT > CP009273/2945355‑2945653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |