Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,989,041 T→A 12.8% pseudogene (79/447 nt) ygeN ← pseudogene

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,989,0410TA12.8% 479.3 / 53.7 156pseudogene (79/447 nt)ygeNpseudogene
Reads supporting (aligned to +/- strand):  ref base T (72/64);  new base A (9/11);  total (81/75)
Fisher's exact test for biased strand distribution p-value = 6.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 161 total aligned reads displayed.

ATCATCATGAAATGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCTTTTGTATA  >  CP009273/2988892‑2989190
                                                                                                                                                     |                                                                                                                                                     
atcatcATGAAATGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCGACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAt                                                                                                                                                       <  2:501929/150‑1 (MQ=255)
      atGAAATGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGAt                                                                                                                                                 <  1:101075/150‑1 (MQ=255)
      atGAAATGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGAt                                                                                                                                                 <  1:3121059/150‑1 (MQ=255)
      atGAAATGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGAt                                                                                                                                                 <  2:1905430/150‑1 (MQ=255)
         aaaTTTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGAATTATCTTTGAAACTGGTAGGTATATTTAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATaaa                                                                                                                                              <  1:688566/150‑1 (MQ=255)
          aaTGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATaaaa                                                                                                                                             >  2:65431/1‑150 (MQ=255)
          aaTGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATaaaa                                                                                                                                             <  1:814625/150‑1 (MQ=255)
             gTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACa                                                                                                                                          <  2:1563048/150‑1 (MQ=255)
                  atGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAAc                                                                                                                                     <  1:2889820/150‑1 (MQ=255)
                  atGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAAc                                                                                                                                     <  1:625789/150‑1 (MQ=255)
                   tGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAAct                                                                                                                                    <  2:1764759/150‑1 (MQ=255)
                    ggACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAActt                                                                                                                                   <  1:75099/150‑1 (MQ=255)
                      aCATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAActtct                                                                                                                                 >  2:1181321/1‑150 (MQ=255)
                      aCATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAActtct                                                                                                                                 >  2:3469002/1‑150 (MQ=255)
                      aCATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAActtct                                                                                                                                 >  1:2409777/1‑150 (MQ=255)
                        aTTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACttcttc                                                                                                                               >  1:1836419/1‑150 (MQ=255)
                        aTTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACttcttc                                                                                                                               <  2:225837/150‑1 (MQ=255)
                         ttCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTtcttct                                                                                                                              >  1:1734186/1‑150 (MQ=255)
                         ttCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTtcttct                                                                                                                              >  1:1734191/1‑150 (MQ=255)
                             atatTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAg                                                                                                                          >  1:3472230/1‑150 (MQ=255)
                               atTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGt                                                                                                                        <  2:1308639/150‑1 (MQ=255)
                                  gATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGtttt                                                                                                                     >  1:1731452/1‑150 (MQ=255)
                                      tGTCGACAAAAGATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACa                                                                                                                 <  2:3636865/150‑1 (MQ=255)
                                         cGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAata                                                                                                              >  1:1022267/1‑150 (MQ=255)
                                          gACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTTCCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGTAGGTTTTAAAAatat                                                                                                             >  2:3788455/1‑150 (MQ=255)
                                           aCAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAAtata                                                                                                            >  1:3247599/1‑150 (MQ=255)
                                           aCAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAAtata                                                                                                            >  2:2114081/1‑150 (MQ=255)
                                           aCAAAATATGACTCTACTACAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAAtata                                                                                                            <  2:2104153/150‑1 (MQ=255)
                                            cAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATAc                                                                                                           >  1:1369568/1‑150 (MQ=255)
                                            cAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATAc                                                                                                           >  1:1600054/1‑150 (MQ=255)
                                             aaaaTATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATAct                                                                                                          >  2:3405774/1‑150 (MQ=255)
                                             aaaaTATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATAct                                                                                                          >  1:2545860/1‑150 (MQ=255)
                                             aaaaTATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATAct                                                                                                          <  1:1117341/150‑1 (MQ=255)
                                                atatGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCtt                                                                                                       >  2:579739/1‑150 (MQ=255)
                                                 tatGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTc                                                                                                      <  2:1105367/150‑1 (MQ=255)
                                                  atGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCa                                                                                                     >  2:270163/1‑150 (MQ=255)
                                                   tGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAg                                                                                                    >  2:1794438/1‑150 (MQ=255)
                                                     aCTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGAt                                                                                                  <  2:4365222/150‑1 (MQ=255)
                                                     aCTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGAt                                                                                                  <  2:1202405/150‑1 (MQ=255)
                                                      ctctACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATc                                                                                                 <  2:2762395/150‑1 (MQ=255)
                                                      ctctACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATc                                                                                                 >  1:597692/1‑150 (MQ=255)
                                                       tctACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCg                                                                                                <  2:4372840/150‑1 (MQ=255)
                                                            ttCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTAt                                                                                           >  2:1055933/1‑150 (MQ=255)
                                                              cAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCa                                                                                         <  2:312960/150‑1 (MQ=255)
                                                              cAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCa                                                                                         >  2:1320999/1‑150 (MQ=255)
                                                              cAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCa                                                                                         <  2:721033/150‑1 (MQ=255)
                                                              cAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCa                                                                                         >  2:631282/1‑150 (MQ=255)
                                                               aaGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCAt                                                                                        >  2:4306384/1‑150 (MQ=255)
                                                                  agaCTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGtt                                                                                     <  2:298282/150‑1 (MQ=255)
                                                                  agaCTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGtt                                                                                     <  2:956840/150‑1 (MQ=255)
                                                                  agaCTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGtt                                                                                     <  1:3856700/150‑1 (MQ=255)
                                                                    aCTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTa                                                                                   <  1:946338/150‑1 (MQ=255)
                                                                    aCTTATCTTTGAAACTGGTAGGTATATGGAGATGTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTa                                                                                   <  1:4243336/150‑1 (MQ=255)
                                                                        aTCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCt                                                                               <  2:3633965/150‑1 (MQ=255)
                                                                        aTCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAAAAATATACTCTTCATATCGTTTATAATGTTTATTCt                                                                               >  1:2151553/1‑150 (MQ=255)
                                                                        aTCTTTGAAACGGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCt                                                                               <  1:3426613/150‑1 (MQ=255)
                                                                          cTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCttt                                                                             >  1:4000761/1‑150 (MQ=255)
                                                                              gAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCttttttt                                                                         <  2:3881192/150‑1 (MQ=255)
                                                                              gAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCttttttt                                                                         <  2:1838496/150‑1 (MQ=255)
                                                                              gAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCttttttt                                                                         <  2:2727018/150‑1 (MQ=255)
                                                                               aaaCTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCtttttttt                                                                        >  2:2799452/1‑150 (MQ=255)
                                                                                    ggtaggtaTATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGt                                                                   >  2:1020959/1‑150 (MQ=255)
                                                                                    ggtaggtaTATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGt                                                                   <  2:4299913/150‑1 (MQ=255)
                                                                                           atatGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGc                                                            >  2:2014197/1‑150 (MQ=255)
                                                                                            tatGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCATGTTCTGAGCa                                                           >  1:4308662/1‑150 (MQ=255)
                                                                                             atGGAGATTTACAGGACATGATATTGATGGTAATTTTGTTACCCAACTTTCAATAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATTCTCTTCAGATCGTTTATCATGTTTTTTCTTTTTTTTCAAGTTCTGAGCAt                                                          <  1:1996920/150‑1 (MQ=255)
                                                                                                   aTTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAg                                                    >  1:2000001/1‑150 (MQ=255)
                                                                                                   aTTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAg                                                    <  2:2261395/150‑1 (MQ=255)
                                                                                                    tttACAGGACCTTATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGc                                                   <  2:703824/150‑1 (MQ=255)
                                                                                                     ttACAGGACCTGATATTTATTGTAATTTTGTTACCCAACTTACAAAAATTTTTATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCt                                                  <  2:4047307/150‑1 (MQ=255)
                                                                                                      tACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCtt                                                 <  2:1647589/150‑1 (MQ=255)
                                                                                                         aGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATc                                              <  1:1089243/150‑1 (MQ=255)
                                                                                                          ggACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCa                                             >  2:963094/1‑150 (MQ=255)
                                                                                                           gACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCaa                                            <  1:3670330/150‑1 (MQ=255)
                                                                                                           gACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCaa                                            <  1:1387166/150‑1 (MQ=255)
                                                                                                              cTGATATTGATGGTAATTTTGTTACCCAACTATCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAggg                                         >  2:3354568/1‑150 (MQ=255)
                                                                                                                 atatTGATGTTAATTTTGTTACACAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTTAATGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGtat                                      <  2:3168774/150‑1 (MQ=255)
                                                                                                                 atatTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGtat                                      <  2:736954/150‑1 (MQ=255)
                                                                                                                 atatTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTATTTTTTTTAAATTTATTAGCATATCAAGCTTATAAAGGGtat                                      >  2:842564/1‑150 (MQ=255)
                                                                                                                   atTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATaa                                    >  2:2530112/1‑150 (MQ=255)
                                                                                                                        tGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTa                               >  2:548329/1‑150 (MQ=255)
                                                                                                                           tAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATcc                            <  1:2307130/150‑1 (MQ=255)
                                                                                                                            aaTTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTGTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATcaa                           >  2:4275598/1‑148 (MQ=255)
                                                                                                                            aaTTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCa                           >  2:4275583/1‑150 (MQ=255)
                                                                                                                            aaTTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCGTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCa                           >  2:4460127/1‑150 (MQ=255)
                                                                                                                                ttGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCAtctc                       >  1:3516182/1‑150 (MQ=255)
                                                                                                                                ttGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCAGGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCAtctc                       >  1:2242467/1‑150 (MQ=255)
                                                                                                                                 tGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCtca                      >  1:1531460/1‑150 (MQ=255)
                                                                                                                                    tACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCtcatca                   >  1:47383/1‑150 (MQ=255)
                                                                                                                                     aCCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCaa                  >  2:3408956/1‑150 (MQ=255)
                                                                                                                                     aCCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCaa                  >  2:1775466/1‑150 (MQ=255)
                                                                                                                                         aaatttCAAAAAATTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCaataat              <  2:3736501/147‑1 (MQ=255)
                                                                                                                                            tttCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGcc           >  2:4204774/1‑150 (MQ=255)
                                                                                                                                             ttCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCt          <  2:2545860/150‑1 (MQ=255)
                                                                                                                                              tCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCtt         <  1:1401470/150‑1 (MQ=255)
                                                                                                                                               cAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCttt        >  1:1183207/1‑150 (MQ=255)
                                                                                                                                               cAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCttt        >  1:2575096/1‑150 (MQ=255)
                                                                                                                                                aaaaaTTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCACGGGTATAAAATTATCCATCTCATCAATAATGCCtttt       >  2:2468431/1‑150 (MQ=255)
                                                                                                                                                   aaTTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCTTTTGtc    >  2:4110549/1‑149 (MQ=255)
                                                                                                                                                     ttttGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCTTTTGtata  <  1:126170/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATCATCATGAAATGTAATATGGACATTCCATATTGATTTGTCGACAAAATATGACTCTACTTCAAGAGACTTATCTTTGAAACTGGTAGGTATATGGAGATTTACAGGACCTGATATTGATGGTAATTTTGTTACCCAACTTTCAAAAATTTTGATAAAAACATCAACTTCTTCTGAAGGTTTTAACAATATACTCTTCAGATCGTTTATCATGTTTATTCTTTTTTTTCAAGTTCTGAGCATAGCAAGCTTATCAAGGGTATAAAATTATCCATCTCATCAATAATGCCTTTTGTATA  >  CP009273/2988892‑2989190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑