| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,191,701 | C→A | 13.3% | E434* (GAA→TAA) | glnE ← | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,191,701 | 0 | C | A | 13.3% | 888.4 / 81.5 | 275 | E434* (GAA→TAA) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base C (126/111); new base A (14/24); total (140/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.99e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 281 total aligned reads displayed.
CAGCGTTAGCACCTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCA > CP009273/3191552‑3191850 | cAGCGTTAGCACCTGTTTGCGATAATCCTCGATAAGATGCGCCAGCACTGGCGTAGTGTCATATTCCTGCAACGCATCCTGCAACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTc < 1:1940524/150‑1 (MQ=255) gTTAGCACCTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTa > 2:2224752/1‑150 (MQ=255) gTTAGCACCTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTa > 2:3176470/1‑150 (MQ=255) tAGCACCTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTaaa > 2:449274/1‑150 (MQ=255) cACCTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATGTTCCTGCAACGAATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAacac < 1:2519757/150‑1 (MQ=255) aCCTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACAcc > 1:1986917/1‑150 (MQ=255) cTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCg < 1:642676/150‑1 (MQ=255) tGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCgg < 1:3702840/150‑1 (MQ=255) gTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGgc > 1:398007/1‑150 (MQ=255) gATCATCCTCGCTAAGTGGCGCCAGCAGTGGCGTTGTGTAATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACAt < 1:789539/150‑1 (MQ=255) atcatcCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACAtt > 1:1259269/1‑150 (MQ=255) tcatcCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTg < 1:1023408/150‑1 (MQ=255) ctagCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACAGTGGTCat > 2:520534/4‑150 (MQ=255) cTCGCTAAGATGCGCCAGCTCTGGCTTTGTGTCATCTTCCTGCACCGAATACTGACACTGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTAGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCat < 1:1013173/150‑1 (MQ=255) cTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCat > 1:3025283/1‑150 (MQ=255) cGCTAAGATGCGCCAGCAGTGGCGTTGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCatat < 1:1181395/150‑1 (MQ=255) cTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATAtgt > 1:1828082/1‑150 (MQ=255) cTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATAtgt > 1:4106501/1‑150 (MQ=255) tAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATAtgtg > 2:1160708/1‑150 (MQ=255) aaGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGc > 2:1860112/1‑150 (MQ=255) aaGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGc > 2:392226/1‑150 (MQ=255) gATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCgg > 2:2630509/1‑150 (MQ=255) aTGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCggg > 2:2793373/1‑149 (MQ=255) tGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTc < 1:2314266/150‑1 (MQ=255) gcgcCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCa < 2:2425863/150‑1 (MQ=255) aGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGcc < 2:2272283/150‑1 (MQ=255) aGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGcc > 2:158208/1‑150 (MQ=255) aGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGcc > 2:1603326/1‑150 (MQ=255) gCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGccc < 2:2073986/150‑1 (MQ=255) cACTGGCGTTGTGTCATTTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGcccc < 1:3990696/150‑1 (MQ=255) cTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCgg > 2:3836024/1‑150 (MQ=255) tGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGt > 1:432693/1‑150 (MQ=255) gtcGTAGTGTCAACTTACTGCAACGCAACCTGCCACAGCTCACGCCACTGTTCCGACAGCGACACTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGAGGTCAGCGCCCCGGTc > 2:735891/3‑150 (MQ=255) ggCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTc > 2:356215/1‑150 (MQ=255) tgtCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCg > 2:1346190/1‑150 (MQ=255) gtCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCgg > 1:2378485/1‑150 (MQ=255) tCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGc > 1:2827695/1‑150 (MQ=255) cATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGcc < 2:2477227/150‑1 (MQ=255) tCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAg > 1:4214793/1‑150 (MQ=255) cTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGt < 1:3287753/150‑1 (MQ=255) cTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGt > 1:2906179/1‑150 (MQ=255) cTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGt < 2:3501935/150‑1 (MQ=255) cTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGt > 2:2374125/1‑150 (MQ=255) tCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCa < 1:2191109/150‑1 (MQ=255) tGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCa > 1:892877/1‑150 (MQ=255) cGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTc < 2:2785335/150‑1 (MQ=255) cGCATCCTGCCACAGCTCACGCCACTGGTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTc < 2:1053461/150‑1 (MQ=255) aTCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCAt < 1:1448700/150‑1 (MQ=255) aTCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCAt < 1:1448808/150‑1 (MQ=255) aTCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCAt < 2:2945345/150‑1 (MQ=255) tCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATc < 2:4280979/150‑1 (MQ=255) tCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATc < 2:634360/150‑1 (MQ=255) tCCTGCCACAGATCACGCCACTGGTCCGACCGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATc < 1:2658947/150‑1 (MQ=255) tGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGcc > 2:2594673/1‑150 (MQ=255) aGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGcc > 1:3826389/1‑150 (MQ=255) aGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGcc < 1:1603326/150‑1 (MQ=255) cGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATCTGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCcgccgc > 1:4049462/1‑150 (MQ=255) ccACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCgcgc > 2:4094875/1‑150 (MQ=255) cTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACg > 2:3546423/1‑150 (MQ=255) ttCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGAtt < 1:2692459/150‑1 (MQ=255) ttCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGAtt < 2:3218331/150‑1 (MQ=255) gACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGc < 1:2877816/150‑1 (MQ=255) gACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGc < 2:1986917/150‑1 (MQ=255) gCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCtcat < 2:3389853/150‑1 (MQ=255) cGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCtcatc < 1:1700175/150‑1 (MQ=255) gACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCtcatca > 2:3906028/1‑150 (MQ=255) aCTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAg > 2:943358/1‑150 (MQ=255) aCTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAg < 1:3599572/150‑1 (MQ=255) ttCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAgaagg < 2:2026912/150‑1 (MQ=255) ttCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAgaagg > 1:3766111/1‑150 (MQ=255) cTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAgaaggaag < 1:4491346/150‑1 (MQ=255) gAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCg < 2:3647851/150‑1 (MQ=255) tttCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATAGGTGCGGTCAGCGCCCCGGTCAGGTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCt < 2:3670709/150‑1 (MQ=255) tttCACTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCt > 1:2446203/1‑150 (MQ=255) ttCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTg < 1:388123/150‑1 (MQ=255) ttCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTg < 2:1143369/150‑1 (MQ=255) tCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTgg < 1:3189961/150‑1 (MQ=255) cACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTggg > 2:3537285/1‑150 (MQ=255) cACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTggg > 2:1250024/1‑150 (MQ=255) aCTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGt > 2:2165402/1‑150 (MQ=255) aCTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGt > 2:1384573/1‑150 (MQ=255) cTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGtt > 2:3482789/1‑150 (MQ=255) cTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGtg > 2:3456125/1‑149 (MQ=255) cTTTCATCGTCGCCAATCAATTAATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGtt < 2:1776619/150‑1 (MQ=255) tttCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGttt < 2:3393888/150‑1 (MQ=255) tttCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGttt < 2:1914514/150‑1 (MQ=255) tttCATCGTCGCAAATCAATTAATTAAACACCCGGCGCAATTTGGTCATAGGTGGGGTCAGCGCCCGGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACTATTAAGCTCATCAGAAGGAAGCGTCTGGGttt < 1:1121997/150‑1 (MQ=255) tCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGt > 1:4450214/1‑150 (MQ=255) aTCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTtc < 1:3662209/150‑1 (MQ=255) gtcgCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTtcgtc > 2:286228/1‑150 (MQ=255) tcgCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTccgtcg < 1:331692/150‑1 (MQ=255) atcaatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATg > 1:2161087/1‑150 (MQ=255) tcaatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGc > 2:4140811/1‑150 (MQ=255) caatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCt > 1:3371744/1‑150 (MQ=255) aatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCtt < 2:2662653/150‑1 (MQ=255) aatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCtt < 2:3289524/150‑1 (MQ=255) attaattaAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCttt > 2:2407093/1‑150 (MQ=255) attaattaAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGGTTGTTCGTCGTTAATGCttt > 2:1494634/1‑150 (MQ=255) ttCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTg < 2:2906179/150‑1 (MQ=255) tCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTgc > 2:4464447/1‑150 (MQ=255) | CAGCGTTAGCACCTGTTTGCGATCATCCTCGCTAAGATGCGCCAGCACTGGCGTAGTGTCATCTTCCTGCAACGCATCCTGCCACAGCTCACGCCACTGTTCCGACAGCGACTCTTCCTGAGTTTCACTTTCATCGTCGCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCA > CP009273/3191552‑3191850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |