Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,246,327 C→T 14.8% R20C (CGT→TGT)  yhaI → DUF805 family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,246,3270CT14.8% 606.6 / 83.4 216R20C (CGT→TGT) yhaIDUF805 family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base C (102/82);  new base T (20/12);  total (122/94)
Fisher's exact test for biased strand distribution p-value = 5.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.93e-01

Only 100 of 225 total aligned reads displayed.

ACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGT  >  CP009273/3246178‑3246476
                                                                                                                                                     |                                                                                                                                                     
 ccTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCAcgtcg                                                                                                                                                      <  2:2279451/150‑1 (MQ=255)
 ccTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCAcgtcg                                                                                                                                                      >  1:2489059/1‑150 (MQ=255)
    ttATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTaa                                                                                                                                                   >  2:3839582/1‑150 (MQ=255)
     tataACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTaaa                                                                                                                                                  >  1:1352118/1‑150 (MQ=255)
     tataACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTaaa                                                                                                                                                  <  2:1608518/150‑1 (MQ=255)
     tataACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTaaa                                                                                                                                                  >  1:538946/1‑150 (MQ=255)
      ataACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAag                                                                                                                                                 >  2:363980/1‑150 (MQ=255)
       taACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAaga                                                                                                                                                >  2:2353169/1‑150 (MQ=255)
          cATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTa                                                                                                                                             >  1:3627198/1‑150 (MQ=255)
          cATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTa                                                                                                                                             >  1:3470621/1‑150 (MQ=255)
              cGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTgg                                                                                                                                         >  2:2950559/1‑150 (MQ=255)
                aaaaaGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGAt                                                                                                                                       >  1:735365/1‑150 (MQ=255)
                 aaaaGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAAGTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATg                                                                                                                                      >  2:1173161/1‑150 (MQ=255)
                   aagaaagaTACGAATAGCATTTACACAATGCCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGtt                                                                                                                                    <  1:2591752/150‑1 (MQ=255)
                    agaaagaTACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGttt                                                                                                                                   <  1:3374858/150‑1 (MQ=255)
                     gaaagaTACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTa                                                                                                                                  <  2:328470/150‑1 (MQ=255)
                        agaTACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTActc                                                                                                                               >  1:3404653/1‑150 (MQ=255)
                          aTACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTg                                                                                                                             <  2:3063543/150‑1 (MQ=255)
                          aTACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTg                                                                                                                             <  2:1127374/150‑1 (MQ=255)
                              gAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTa                                                                                                                         >  2:4018722/1‑150 (MQ=255)
                               aaTAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTaa                                                                                                                        >  1:2104142/1‑150 (MQ=255)
                                  aGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCTGTGGTATTTGTCCGTATTCAAAAATTCTGTTGGTTTGTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGAGTAACGc                                                                                                                     >  1:4041943/1‑150 (MQ=255)
                                  aGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGc                                                                                                                     >  1:3149972/1‑150 (MQ=255)
                                    cATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCa                                                                                                                   <  1:1018326/150‑1 (MQ=255)
                                    cATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCa                                                                                                                   >  1:3242746/1‑150 (MQ=255)
                                    cATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCa                                                                                                                   <  1:3816870/150‑1 (MQ=255)
                                       taacacacTACCCGCAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCAtcg                                                                                                                <  2:4432715/148‑1 (MQ=255)
                                        tACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCAtcgt                                                                                                               <  1:4280999/150‑1 (MQ=255)
                                        tACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCAtcgt                                                                                                               >  1:188608/1‑150 (MQ=255)
                                           acaATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCgg                                                                                                            <  1:1733338/150‑1 (MQ=255)
                                           acaATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCCGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCgg                                                                                                            <  2:687235/150‑1 (MQ=255)
                                             aaTACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGgcg                                                                                                          >  1:1801486/1‑150 (MQ=255)
                                                aCCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCta                                                                                                       >  1:4368669/1‑150 (MQ=255)
                                                   cGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCtatta                                                                                                    <  2:1999960/150‑1 (MQ=255)
                                                   cGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCtatta                                                                                                    >  2:1928593/1‑150 (MQ=255)
                                                       aTAGACTTTCGTCACTTTTAATTAAAGGGATGATTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCaa                                                                                                <  1:1256009/150‑1 (MQ=255)
                                                        tAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAAt                                                                                               >  1:37941/1‑150 (MQ=255)
                                                         aGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATg                                                                                              >  1:2715315/1‑150 (MQ=255)
                                                           aCTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTc                                                                                            >  1:2919677/1‑150 (MQ=255)
                                                            cTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCa                                                                                           <  2:4407640/150‑1 (MQ=255)
                                                               tCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTc                                                                                        >  1:260121/1‑150 (MQ=255)
                                                                 gTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCaa                                                                                      <  2:2597496/150‑1 (MQ=255)
                                                                   cACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAAtt                                                                                    <  1:3701599/150‑1 (MQ=255)
                                                                     cTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGa                                                                                  >  2:268653/1‑150 (MQ=255)
                                                                      ttttAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGAt                                                                                 <  1:2270724/150‑1 (MQ=255)
                                                                        ttaattaaAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGAttt                                                                               >  2:2375127/1‑150 (MQ=255)
                                                                        ttaattaaAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGAACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGAttt                                                                               >  2:2374793/1‑150 (MQ=255)
                                                                        ttaattaaAGGGATGTTTATATGCAGTGGAATTTGTCCGTAATAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCTGCGCTATTATCAATGTCATTAAATTGAttt                                                                               >  2:711238/1‑150 (MQ=39)
                                                                          aattaaAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCATTTGTTTTTa                                                                             >  2:2641864/1‑150 (MQ=255)
                                                                          aattaaAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATGTTa                                                                             >  1:3241332/1‑150 (MQ=255)
                                                                               aaGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCt                                                                        >  2:3172425/1‑150 (MQ=255)
                                                                                aGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTg                                                                       >  1:2783418/1‑150 (MQ=255)
                                                                                 gggATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTgg                                                                      <  1:3425128/150‑1 (MQ=255)
                                                                                 gggATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTgg                                                                      <  1:1140140/150‑1 (MQ=255)
                                                                                  ggATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGa                                                                     >  1:851230/1‑150 (MQ=255)
                                                                                     tGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCt                                                                  <  2:4158841/150‑1 (MQ=255)
                                                                                        ttttATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTcc                                                               <  2:1762259/150‑1 (MQ=255)
                                                                                         tttATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCa                                                              >  2:1743017/1‑150 (MQ=255)
                                                                                             tGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATc                                                          >  1:1278449/1‑150 (MQ=255)
                                                                                              gCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCt                                                         >  2:4388074/1‑150 (MQ=255)
                                                                                               cAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTg                                                        >  2:3728035/1‑150 (MQ=255)
                                                                                                aGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGt                                                       <  1:699138/150‑1 (MQ=255)
                                                                                                   ggTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTa                                                    <  2:1765600/150‑1 (MQ=255)
                                                                                                   ggTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTa                                                    <  2:2765378/150‑1 (MQ=255)
                                                                                                    gTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTag                                                   >  2:356885/1‑149 (MQ=255)
                                                                                                    gTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTAt                                                   >  1:1042186/1‑150 (MQ=255)
                                                                                                    gTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTAt                                                   <  1:1687065/150‑1 (MQ=255)
                                                                                                    gTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTAt                                                   >  1:412009/1‑150 (MQ=255)
                                                                                                     tATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCTGCGCTATTATAAAAGTCATTCAATAGAATTTAGGTCTGGAGAATCAATATATTTCTATg                                                  >  1:809877/1‑150 (MQ=255)
                                                                                                     tATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATg                                                  <  2:1099382/150‑1 (MQ=255)
                                                                                                      aTTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGc                                                 >  2:3903506/1‑150 (MQ=255)
                                                                                                         tGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCttt                                              >  1:1469520/1‑150 (MQ=255)
                                                                                                         tGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCttt                                              <  2:202443/150‑1 (MQ=255)
                                                                                                         tGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCttt                                              <  1:2534011/150‑1 (MQ=255)
                                                                                                          gTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTa                                             >  1:4205999/1‑150 (MQ=255)
                                                                                                          gTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTa                                             >  2:4067343/1‑150 (MQ=255)
                                                                                                             cGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTAttt                                          >  2:2419510/1‑150 (MQ=255)
                                                                                                              gTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTg                                         >  2:1897209/1‑150 (MQ=255)
                                                                                                              gTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTg                                         >  2:4479004/1‑150 (MQ=255)
                                                                                                               tATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGc                                        >  1:644969/1‑150 (MQ=255)
                                                                                                                 ttAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTTGAGCTTCCATATCTGTCTATGCTTTATTTGCTg                                      <  1:320805/150‑1 (MQ=255)
                                                                                                                  tAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTgg                                     >  2:363775/1‑150 (MQ=255)
                                                                                                                   aaaaaaTTATGTTGGTTACTCTGGTCGCGCACGTCGTAAAGAGTACTGGAAGTTTACTCTGATTAACGCCATAGTCGGCGCTATTATAAAAGTCAATCAATTGATTTTAGTTATGGAGCTTCCATATATGTCTATGCTTTATTTGCTgtc                                    >  1:2727258/1‑148 (MQ=255)
                                                                                                                      aatttATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAc                                 >  1:1960347/4‑150 (MQ=255)
                                                                                                                      aaaTTATGTTGGTTTCTCTGGTCGCGCACGTTGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAc                                 >  1:643479/1‑150 (MQ=255)
                                                                                                                       aaTTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTAAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAcc                                >  2:1282480/1‑150 (MQ=255)
                                                                                                                        aTTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAcct                               >  2:550548/1‑150 (MQ=255)
                                                                                                                        aTTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGATGGCAAcct                               >  2:550579/1‑150 (MQ=255)
                                                                                                                        aTTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACCCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAcct                               <  1:398178/150‑1 (MQ=255)
                                                                                                                         ttATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAcctt                              <  1:2768547/150‑1 (MQ=255)
                                                                                                                         ttATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAccat                              >  1:861223/1‑148 (MQ=255)
                                                                                                                          tATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAccttc                             >  1:3309804/1‑150 (MQ=255)
                                                                                                                          tATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAAccttc                             <  1:1928593/150‑1 (MQ=255)
                                                                                                                                ggTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCAATATCTGTCTATGCTTTATTTGCTGGCAACCTTCATTccc                       >  2:2175647/1‑150 (MQ=255)
                                                                                                                                        tGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTgc               <  1:1511707/150‑1 (MQ=255)
                                                                                                                                            cgcgCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCtt           >  2:346823/1‑150 (MQ=255)
                                                                                                                                             gcgcACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTg          <  1:2843540/150‑1 (MQ=255)
                                                                                                                                             gcgcACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTg          <  1:2844726/150‑1 (MQ=255)
                                                                                                                                             gcgcACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTg          >  1:3915815/1‑150 (MQ=255)
                                                                                                                                             gcgcACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTg          >  1:905681/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCTTTATAACATCCGAAAAAGAAAGATACGAATAGCATTTACACAATACCCGGAATAGACTTTCGTCACTTTTAATTAAAGGGATGTTTTTATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGT  >  CP009273/3246178‑3246476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: