| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,259,317 | C→A | 10.6% | R24L (CGA→CTA) | tdcB ← | L‑threonine dehydratase, catabolic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,259,317 | 0 | C | A | 10.6% | 963.8 / 64.2 | 274 | R24L (CGA→CTA) | tdcB | L‑threonine dehydratase, catabolic |
| Reads supporting (aligned to +/- strand): ref base C (120/125); new base A (18/11); total (138/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 275 total aligned reads displayed.
TTTCCGCATCGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTAT > CP009273/3259168‑3259465 | ttCCGCATCGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCg < 2:2762299/150‑1 (MQ=255) cGCATCGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGccc > 1:1937853/1‑150 (MQ=255) gCATCGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCcca > 2:3917131/1‑150 (MQ=255) cATCGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCccag < 1:338732/150‑1 (MQ=255) cATCGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCccag < 1:338414/150‑1 (MQ=255) cGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCccagcca < 1:2253103/150‑1 (MQ=255) tCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTc < 2:1759965/150‑1 (MQ=255) tCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTc > 1:2080996/1‑150 (MQ=255) cAGTGATCTTTATTTATTAAATGCGCCACGAATTTTAAATGAACCCGGACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCg < 1:1288596/150‑1 (MQ=255) cAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCg < 1:3557440/150‑1 (MQ=255) tGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCgttg < 2:2125584/150‑1 (MQ=255) gAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCgttgt > 1:2273811/1‑150 (MQ=255) gAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCgttgt > 2:964220/1‑150 (MQ=255) aCTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGttt > 2:1533720/1‑150 (MQ=255) aTTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTAGCtt > 2:40078/1‑150 (MQ=255) aTTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTCGCtt < 1:2465793/150‑1 (MQ=255) ttattaAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCa < 2:4523447/150‑1 (MQ=255) attaAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCaat < 1:3094827/150‑1 (MQ=255) ttaAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCGTCaata > 1:3327690/1‑150 (MQ=255) taAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCTCTTCaataa > 1:2550300/1‑150 (MQ=255) taAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCaataa > 2:37206/1‑150 (MQ=255) aaTGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATg > 2:299092/1‑150 (MQ=255) gcCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGtcatc > 2:1405854/1‑150 (MQ=255) gAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATTTCATCaaaat > 2:2795148/1‑147 (MQ=255) ttttAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCaa < 1:2953492/150‑1 (MQ=255) ttttAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTAATCAATAGaaa > 2:1825747/1‑150 (MQ=255) tAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCaaacc > 1:3243514/1‑147 (MQ=255) tAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCg < 2:759710/150‑1 (MQ=255) aaaTGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTGGCTTAAATAATTTCATCAATAGCAACCgg > 1:4509413/1‑150 (MQ=255) aaaTGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAAAAGCAACCgg > 1:2235457/1‑150 (MQ=255) aTGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCa < 2:329192/150‑1 (MQ=255) gAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGa < 1:1454178/150‑1 (MQ=255) aaCCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGAt > 1:2604155/1‑150 (MQ=255) aaCCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGAt > 2:237097/1‑150 (MQ=255) ccGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGt > 2:3378231/1‑150 (MQ=255) ccGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTAGCTTCAATAATGTCATCAAAATCAACCGGCAGAACGt > 1:3998074/1‑150 (MQ=255) gTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTAt > 2:1844366/1‑150 (MQ=255) cTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCCGATCGTATGTAat > 1:2388679/1‑150 (MQ=255) cATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATg < 1:739360/150‑1 (MQ=255) atatTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGc > 1:1024698/1‑150 (MQ=255) atTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCAt < 1:2797437/150‑1 (MQ=255) atTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCAt > 2:4079470/1‑150 (MQ=255) ttttCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCAtt < 2:286556/150‑1 (MQ=255) ttCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATGTGCATtat > 2:355386/1‑150 (MQ=255) tCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTAGCTTCAATAAAGTCATCAATAGCAAACCGCAGATAGTATGTAAAATGCAAtata > 2:3461470/1‑150 (MQ=255) aaaCTTCAGGAATATTTCACCTTTTCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTGTCTTAAAAAATTTGATCATTATAAAAAGGCATATAGTATTTAATTTTGATTTTaaa > 1:3892513/1‑150 (MQ=255) aaaCTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATaaa > 1:4045397/1‑150 (MQ=255) aaaCTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTAGCTTCAATAATGTCATCAATAGCAACCGGCAGATAGTATTTAATATTCATTATaaa > 1:1613105/1‑150 (MQ=255) aaCTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAAAAAAGTCATAAAAAGCAACCGGCAGATAGTATGTAATATTAATTATaaaa > 1:2884563/1‑150 (MQ=255) aCTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATTTCATCAATAGCAACCGGCAGATCGTATGTAATATTCATTATAAAAc > 1:4127676/1‑150 (MQ=255) aCTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTGGTTTAGCGTGAATAATGTCATCAAAATCAAACCGCAGATCGTATGTAAAATTCATTATAAAAc > 1:827562/1‑150 (MQ=255) cTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAAcc > 2:3310372/1‑150 (MQ=255) cTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAAcc > 2:1329469/1‑150 (MQ=255) ttCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACct < 1:582085/150‑1 (MQ=255) ttCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACct < 1:582179/150‑1 (MQ=255) ggAATATTTCACCTTTTCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTc < 2:2706344/150‑1 (MQ=255) ggAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTc < 2:2468068/150‑1 (MQ=255) ggAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTc < 1:3348594/150‑1 (MQ=255) ggAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTc < 1:1179847/150‑1 (MQ=255) gAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTAGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAAACTCTTCg > 2:1438147/1‑150 (MQ=255) aaTATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTAGc > 1:3012136/1‑150 (MQ=255) atatTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGcc < 1:1210724/150‑1 (MQ=255) tatTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCt < 1:2219627/150‑1 (MQ=255) tatTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCt > 2:3091973/1‑150 (MQ=255) tatTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTAAATAATGTCATCAATAGCAACCCGCAGATAGTATGTAATAATCATTATAAAACCTCTTCGCCt > 1:84625/1‑150 (MQ=255) atTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTg < 1:1764208/150‑1 (MQ=255) tttCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGa < 1:1635708/150‑1 (MQ=255) cACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCACTTCGCCTGAAtt > 1:2245382/1‑150 (MQ=255) aCCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTa < 1:674869/150‑1 (MQ=255) aCCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGGATGTAATATTCATTATAAAACCACTTAGCCAGAAATa > 1:3608662/1‑150 (MQ=255) aCCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTGGTTTAGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTa > 2:1136725/1‑150 (MQ=255) ccTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATAAATATCAACCGGCAGATCGTATGTAATATGCATTATAAAACCACATCGCCTGAATTaa > 1:110209/1‑150 (MQ=255) tGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAatat < 2:3434473/150‑1 (MQ=255) cAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGt < 2:4400055/150‑1 (MQ=255) cAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCGTCAATAATTTCATCAATATCAACCGGCACAAAGTATTTAATATGCATTATAAAAACACTTCGCCTGAAATAAATATGt > 1:1524569/1‑150 (MQ=255) aaCGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCCGATCGTATGTAATATGCATTATAAAACAGCTTCGCCGGAATTAAATATTTa > 1:201693/1‑150 (MQ=255) aaCGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTa < 2:591188/150‑1 (MQ=255) cGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAgg < 1:3682908/150‑1 (MQ=255) cGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAAGAATGTCATAAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAAACACTTCGCCTGAATTTAATATGTAgg > 1:978087/1‑150 (MQ=255) gTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGgt < 2:3157620/150‑1 (MQ=255) gTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGgt > 2:306325/1‑150 (MQ=255) ttCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGgta < 2:1291811/150‑1 (MQ=255) tCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGgtaa < 2:2273642/150‑1 (MQ=255) cACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGgtaac < 1:1665747/150‑1 (MQ=255) aaTAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTGTTTTCGCTTCAAAAAAGTCATAAAAAGCAACCCGCAGATACTATGTAATATTCAATATAAAAACACTTAGCCATAAATAAAAATGAAAgtaaaactaaa > 1:3941616/1‑143 (MQ=255) aTAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGgtaaccgtaacc < 2:411647/150‑1 (MQ=255) tAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTGGCGTAAAAAATTTAAACAAAATCAAACCGCAGAACGGATGTTATATTAATTATAAAAACACTTAGCCGGAATTAAAAATTTATttaaacctaaccc > 1:3449298/1‑149 (MQ=255) tGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCGTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGacac > 2:1026993/1‑150 (MQ=255) tGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTAGCTTCAATAATGTAAGAAATAGCAACCGGCCGATCGTATGTAATATTCATTATAAAAAAAAGTAGCCAGAATTAAATATGTATGTAACCGTAAACGacac > 1:1935602/1‑150 (MQ=255) gAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCt < 2:2336861/150‑1 (MQ=255) gAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCt < 2:2337153/150‑1 (MQ=255) gCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCGTCAATAATTTCATCAATAGCAAACGGCAGATCGTATGTAAAATTCATTATAAAAACACTTCGCCTGAATTAAATATGTAGGTAAACGTAACCGACACCAGc > 2:3069595/1‑150 (MQ=255) gCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAagac < 1:4475377/150‑1 (MQ=255) tGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAagacaga < 2:369270/150‑1 (MQ=255) gTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGt > 2:2544801/1‑150 (MQ=255) tttATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTgg < 1:454212/150‑1 (MQ=255) tttATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTgg < 2:1885478/150‑1 (MQ=255) tataAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAACACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGat < 1:4286038/150‑1 (MQ=255) tataAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGAATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGat < 2:883960/150‑1 (MQ=255) tCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGAttatttat < 1:40078/150‑1 (MQ=255) | TTTCCGCATCGGTCAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTAT > CP009273/3259168‑3259465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |