| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,466,358 | C→A | 8.8% | A172A (GCG→GCT) | fusA ← | protein chain elongation factor EF‑G, GTP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,466,358 | 0 | C | A | 8.8% | 748.5 / 37.6 | 215 | A172A (GCG→GCT) | fusA | protein chain elongation factor EF‑G, GTP‑binding |
| Reads supporting (aligned to +/- strand): ref base C (99/97); new base A (8/11); total (107/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01 | |||||||||||
Only 100 of 219 total aligned reads displayed.
AGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGA > CP009273/3466209‑3466507 | aGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATc < 2:692728/150‑1 (MQ=255)aGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATc < 2:2523557/150‑1 (MQ=255) gTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGc > 2:1363135/1‑150 (MQ=255) tCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCa < 2:506255/150‑1 (MQ=255) ttCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCgg > 2:1255123/1‑150 (MQ=255) gTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATAGCCAGCTGCAGCGGAAc < 2:2859507/150‑1 (MQ=255) ttAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAAcc < 2:4293535/150‑1 (MQ=255) aGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAAcccg < 1:2552925/150‑3 (MQ=255) gCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCggg > 1:4489181/1‑150 (MQ=255) aGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCCATCGCCAGCTGCAGCGGAACCGGGTTc > 1:3600797/1‑150 (MQ=255) ggccAACCATGTCTGCCGCGATAACGCCGTACTCGAAGGTAACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTATCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTcg < 2:3078673/147‑1 (MQ=255) gTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTcg > 1:3371665/1‑150 (MQ=255) tCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGACCCGGGTTcgcg > 1:1615024/1‑150 (MQ=255) aaCCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGcc > 2:1006467/1‑150 (MQ=255) aaCCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATAGCCAGCTGCAGCGGAACCGGGTTCGCGcc < 1:4381955/150‑1 (MQ=255) ccATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACTGGGTTCGCGCCCa < 1:52414/150‑1 (MQ=255) ccATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACTGGGTTCGCGCCCa < 1:2083787/150‑1 (MQ=255) gTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACg > 2:1402915/1‑150 (MQ=255) gTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGGTCCAGTTGATAGCTTTCATGGTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACg < 2:3572356/150‑1 (MQ=255) cTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACggg < 2:1777855/150‑1 (MQ=255) cGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACCACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGtttt > 2:21185/1‑150 (MQ=255) ggATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGa < 1:2846705/150‑1 (MQ=255) gATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATAGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGAt < 1:2483679/150‑1 (MQ=255) atCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTg > 2:751407/1‑150 (MQ=255) ttCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGtt < 1:3903295/150‑1 (MQ=255) gTATTCGAAGGTTACGCCCTGTTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCATTAGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTaac < 2:1883075/150‑1 (MQ=255) gTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCAATTTCACCAGGTAAACAACACCGTTTAAATGTTCTTCAGAAACAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTaac > 1:1780456/1‑150 (MQ=255) tATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTaaca < 1:1309799/150‑1 (MQ=255) aTTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTaacaa < 2:2253230/150‑1 (MQ=255) aaGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTc < 2:263887/150‑1 (MQ=255) ggTTACGCCCTTGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATAGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAg < 2:141889/150‑1 (MQ=255) gTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAgg > 2:4448534/1‑150 (MQ=255) gTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTAAGCACCAAACGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAgg > 1:1643188/1‑150 (MQ=255) tACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGaa < 2:2770470/150‑1 (MQ=255) aCGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAg > 1:4155594/1‑150 (MQ=255) cGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGt < 2:3310791/150‑1 (MQ=255) gCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACCACACCGGTGAAATTTTATTCAGCACCAAACGCCAGCAGCAGCGGAACCCGGTTCGCGCCCAGACGGGTTTTGATCTTGTTAACAAAATTAAGGAAGtt > 1:1246383/1‑150 (MQ=255) cTGGTCAGCGTCGTTCCAGTTTATAGCTTTCATTTTCACCAGGTCAACCACACCCGTGAAATGTTCTTCAGCACCAAACGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGGTTTGATCTGGTTAACAACTTTCAGGAAGTTCGc > 1:4003494/1‑150 (MQ=255) cTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTAACCAGGTCAAAAACACCGGTGAAATGTTATTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACCACTTTCAGGAAGTTCGc > 2:2307335/1‑150 (MQ=255) gTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCCGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCAcc > 2:2390708/1‑150 (MQ=255) aGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCATCAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCAGCCAt < 2:4509241/150‑1 (MQ=255) aGCGTCGTTACAGTTGATAGCTTTCATTTTCACCAGGTCAACAACAACGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCCGACGGGTTTTTATCTGGTTAACAACTTTAAGGAAGTTCGCACCCAt > 2:3209056/1‑150 (MQ=255) tcgtTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCgg < 1:751896/150‑1 (MQ=255) tcgtTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCgg < 1:1009044/150‑1 (MQ=255) cgtTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGt > 2:636319/1‑150 (MQ=255) cgtTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGt < 2:3165044/150‑1 (MQ=255) ttCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTcc > 2:1197790/1‑150 (MQ=255) ttCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATAGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTcc < 1:8467/150‑1 (MQ=255) cAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGTTTTTGATCTGGTTAACAACTTTCAGGAAGATCGCACCCATGCGGTCCAtt > 1:802533/1‑150 (MQ=255) gTTGATAGCTTTCATTTTCACTAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCAtttt < 2:1484319/150‑1 (MQ=255) gTTGATAGCTTTCATTTTCACTAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCAtttt < 2:1484300/150‑1 (MQ=255) ttGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTg > 2:569750/1‑150 (MQ=255) ttGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTg > 1:2268489/1‑150 (MQ=255) gATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGtt < 2:2437478/150‑1 (MQ=255) gATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGtt < 1:108096/150‑1 (MQ=255) tAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTaa < 1:3019802/150‑1 (MQ=255) aGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTaac > 1:1688227/1‑150 (MQ=255) tttCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTaacgaa > 1:895197/1‑150 (MQ=255) ttCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTaacgaac < 1:1531855/150‑1 (MQ=255) cATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGc > 1:3286082/1‑150 (MQ=255) aTTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCa > 2:4247085/1‑150 (MQ=255) aTTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCa < 1:410342/150‑1 (MQ=255) cACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCACTCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATgcg < 2:1702383/150‑1 (MQ=255) cACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATgcg > 2:3867225/1‑150 (MQ=255) cAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCgg < 2:2841987/150‑1 (MQ=255) cAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCgg < 2:2842620/150‑1 (MQ=255) ggTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAAAGCAATGCGCGGaa > 1:2708103/1‑150 (MQ=255) gTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAAc < 2:3289337/150‑1 (MQ=255) tCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACt < 1:675778/150‑1 (MQ=255) caacaaCACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACtt < 1:1429943/150‑1 (MQ=255) aacaacACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACttt > 1:1137212/1‑150 (MQ=255) aacaacACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACttt > 2:654230/1‑150 (MQ=255) caacaCCTGTGAAATGTTCTTCAGCACCAAGCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACTACTGTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAAATTtat < 2:34424/150‑1 (MQ=255) caacaCCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtat > 1:2122459/1‑150 (MQ=255) aacaCCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTtata > 2:4176297/1‑150 (MQ=255) acacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTatat < 1:1700038/150‑1 (MQ=255) cacCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtt > 2:248540/1‑150 (MQ=255) cGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgt < 2:400025/150‑1 (MQ=255) ggTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgtt > 1:1468746/1‑150 (MQ=255) gTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATAtttgttt < 1:1189015/150‑1 (MQ=255) aaTGTTCTTCAGCACCAATAGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCt < 1:2770241/150‑1 (MQ=255) aTGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTg < 2:2169804/150‑1 (MQ=255) aTGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTg < 1:2009113/150‑1 (MQ=255) aTGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTg < 2:2746430/150‑1 (MQ=255) tGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGa > 2:3692542/1‑150 (MQ=255) gTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGAc < 1:709121/150‑1 (MQ=255) gTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGAc < 1:3788045/150‑1 (MQ=255) ttcttcAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACg < 1:835366/150‑1 (MQ=255) cttcAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGcc > 1:2309288/1‑150 (MQ=255) cttcAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGcc > 2:1970652/1‑150 (MQ=255) aGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATAc < 1:3382380/150‑1 (MQ=255) aGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATAc > 2:2147715/1‑150 (MQ=255) aGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATAc > 1:4226975/1‑150 (MQ=255) cACCAATCGCCAGCTGCAGCGGACCCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGACCTTTATATTTGTTTGCCTGACGCCATACgg > 2:1777231/1‑150 (MQ=255) cACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACgg > 1:35396/1‑150 (MQ=255) aCCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGt > 2:1091857/1‑150 (MQ=255) aCCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGt > 2:1091951/1‑150 (MQ=255) aCCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGt > 1:2947534/1‑150 (MQ=255) aaTCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTc > 1:4277287/1‑150 (MQ=255) tCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAg < 2:2701147/150‑1 (MQ=255) | AGGTTCTGGTGCCATTCGTTAGCCAGTTCAACCATGTCTGCCGGGATATCTTCGTATTCGAAGGTTACGCCCTGGTCAGCGTCGTTCCAGTTGATAGCTTTCATTTTCACCAGGTCAACAACACCGGTGAAATGTTCTTCAGCACCAATCGCCAGCTGCAGCGGAACCGGGTTCGCGCCCAGACGGGTTTTGATCTGGTTAACAACTTTCAGGAAGTTCGCACCCATGCGGTCCATTTTGTTAACGAACGCAATGCGCGGAACTTTATATTTGTTTGCCTGACGCCATACGGTTTCAGA > CP009273/3466209‑3466507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |