| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,619,105 | T→A | 19.1% | A353A (GCA→GCT) | yhhJ ← | inner membrane putative ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,619,105 | 0 | T | A | 19.1% | 679.7 / 153.0 | 266 | A353A (GCA→GCT) | yhhJ | inner membrane putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (117/98); new base A (24/27); total (141/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 274 total aligned reads displayed.
TTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACC > CP009273/3618957‑3619254 | ttATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTg < 2:3445422/150‑1 (MQ=255) aTCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGcc < 2:1206950/150‑1 (MQ=255) cGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATc > 2:16879/1‑150 (MQ=255) cGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAGTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATc > 2:15629/1‑150 (MQ=255) ggCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCa > 2:4174220/1‑150 (MQ=255) gCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAg > 2:4357499/1‑150 (MQ=255) cTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCg > 2:228710/1‑150 (MQ=255) tAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGt > 1:3717133/1‑150 (MQ=255) aaaaaCAACTAAAATTCGATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTc > 2:764078/1‑150 (MQ=255) aaaaaCAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTCCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTc < 1:613811/150‑1 (MQ=255) aaaaCAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCa < 2:3852348/150‑1 (MQ=255) acaacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGATTACGCATCGGGCAATTGTATTAACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGaa > 1:2669656/1‑150 (MQ=255) caacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGaaa > 1:4380209/1‑150 (MQ=255) aacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAAc > 2:3587241/1‑150 (MQ=255) aacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAAc > 1:4254495/1‑150 (MQ=255) tAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGc > 1:1468127/1‑150 (MQ=255) tAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGc > 2:4199498/1‑150 (MQ=255) aaaaTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCg > 1:991803/1‑150 (MQ=255) aaaaTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCg > 2:3140918/1‑150 (MQ=255) aaTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGc > 2:718806/1‑150 (MQ=255) aTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGcc < 2:2853479/150‑1 (MQ=255) ttCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCa < 2:4133273/150‑1 (MQ=255) tCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAg > 2:684347/1‑150 (MQ=255) tCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAg > 1:4296486/1‑150 (MQ=255) cAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGa > 1:1075120/1‑150 (MQ=255) cAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGa > 2:1019770/1‑150 (MQ=255) aaTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAACAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGAc > 1:2629862/1‑150 (MQ=255) aaTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCgg < 2:2136369/144‑1 (MQ=255) aTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACg < 1:1401024/150‑1 (MQ=255) aaaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGAt < 2:3337703/150‑1 (MQ=255) aaaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGAt < 2:4193852/150‑1 (MQ=255) aaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGAtt < 2:3261821/150‑1 (MQ=255) aaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGAtt < 2:1022677/150‑1 (MQ=255) aTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGAttt > 1:1905885/1‑150 (MQ=255) tGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCg < 1:3431830/150‑1 (MQ=255) aCCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAAt < 1:3565377/150‑1 (MQ=255) gATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCg > 1:1295073/1‑150 (MQ=255) gTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCAcc > 2:1713796/1‑150 (MQ=255) gTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGAGTTCGAATCCGGCAcc > 1:81989/1‑150 (MQ=255) cccTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGt < 2:2454378/150‑1 (MQ=255) ccTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTa < 1:2483538/150‑1 (MQ=255) cTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTag < 1:895421/150‑1 (MQ=255) ataAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTagag < 2:921913/150‑1 (MQ=255) tACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGcc < 1:2929737/150‑1 (MQ=255) aCGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCt < 1:1346203/150‑1 (MQ=255) aCGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCt < 1:3630184/150‑1 (MQ=255) cGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTg > 2:2416023/1‑150 (MQ=255) cATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTgcg > 2:1321363/1‑150 (MQ=255) gggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAg > 1:10297/1‑150 (MQ=255) gCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGc < 2:2785145/150‑1 (MQ=255) gTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACaa > 2:841325/1‑150 (MQ=255) aTTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAg > 2:3748119/1‑150 (MQ=255) ttACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAgtg < 2:4171270/150‑1 (MQ=255) cGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAgtgtgt < 2:404020/150‑1 (MQ=255) gCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTgtc < 2:1526328/150‑1 (MQ=255) ccATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTgtcg < 2:2926814/150‑1 (MQ=255) ccATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTgtcg < 1:4510210/150‑1 (MQ=255) cttGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGAGTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTgtcgtc < 2:3926018/149‑1 (MQ=255) aTTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTgtcgtc < 2:2558325/150‑1 (MQ=255) aTTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTgtcgtc < 2:3926076/150‑1 (MQ=255) tGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCgg < 2:4042514/150‑1 (MQ=255) tCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCa < 2:510645/150‑1 (MQ=255) aaTCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGt > 2:3700623/1‑150 (MQ=255) aTCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTc > 2:1944553/1‑150 (MQ=255) aTCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTc > 2:3364812/1‑150 (MQ=255) aTCGTCTTCCTGAATCGCAGCAGCGCAATGGTG‑AAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCa > 2:443606/1‑150 (MQ=255) tCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACACAGTGTGTCGTCGGCATGGTCa < 2:4274688/150‑1 (MQ=255) cGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAg > 1:1622041/1‑150 (MQ=255) cGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAg > 2:4158780/1‑150 (MQ=255) gTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGGGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGc > 2:3247216/1‑150 (MQ=255) ttCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATa < 2:1808023/150‑1 (MQ=255) acTGAATCGCAGCAGCGTTATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGTAACTGTGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGATGCTATCAAAGTGTGTCTTCGGCATGGTCAGCTTAAt < 2:3120824/149‑1 (MQ=255) tGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGt < 2:2457488/150‑1 (MQ=255) tGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGt > 1:2814702/1‑150 (MQ=255) aaTCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTcc > 1:2440260/1‑150 (MQ=255) aaTCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTcc > 1:652097/1‑150 (MQ=255) tCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTg < 1:3010161/150‑1 (MQ=255) tCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTg < 1:3910947/150‑1 (MQ=255) cGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGc > 1:1520278/1‑150 (MQ=255) cagcagCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCAc > 1:3293595/1‑150 (MQ=255) cagcagCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCAc > 1:1014538/1‑150 (MQ=255) cagcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCAt < 1:4030047/150‑1 (MQ=255) agcGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATc < 1:3123847/150‑1 (MQ=255) gcgcAATGGTGAAAAATGCGCCGCCAAGTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCt < 2:4450/150‑1 (MQ=255) cgcAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTg > 1:1711996/1‑150 (MQ=255) gcAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc > 1:2020561/1‑150 (MQ=255) gcAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGc > 1:2019842/1‑150 (MQ=255) cAATGGTGAAAAATGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCg < 1:225480/150‑1 (MQ=255) aaTGCGCCGCCAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGGAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTcg > 2:1610276/1‑150 (MQ=255) aTGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTcgc > 1:4154470/1‑150 (MQ=255) cgccgcCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTcgcgcg < 1:3397734/150‑1 (MQ=255) gccAATAGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGt < 1:4341147/150‑1 (MQ=255) ccAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTg > 1:4122621/1‑150 (MQ=255) cAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTgg > 1:4127193/1‑150 (MQ=255) aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa > 2:2011687/1‑150 (MQ=255) aaTTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGa < 2:2094781/150‑1 (MQ=255) tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAacc > 2:2736428/1‑150 (MQ=255) tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAacc > 2:1096872/1‑150 (MQ=255) tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAacc > 1:792671/1‑150 (MQ=255) tGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAacc > 2:3033323/1‑150 (MQ=255) | TTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTTCGAATCCGGCACCCCGGTAGAGGATGGCCTGCGCGAGGCTAACAAAGTGTGTCGTCGGCATGGTCAGCATAATGTCCTGCACCATCTGCGGCATACTTTCGCGCGGCGTGGAACC > CP009273/3618957‑3619254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |