| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,627,639 | G→A | 16.8% | pseudogene (180/1194 nt) | yhiL ← | pseudogene, DUF4049 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,627,639 | 0 | G | A | 16.8% | 475.5 / 79.5 | 178 | pseudogene (180/1194 nt) | yhiL | pseudogene, DUF4049 family protein |
| Reads supporting (aligned to +/- strand): ref base G (63/85); new base A (11/19); total (74/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.59e-01 | |||||||||||
Only 100 of 181 total aligned reads displayed.
ATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATGGCTTGAAGAGAT > CP009273/3627490‑3627788 | gATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAg < 2:1719475/150‑1 (MQ=255) gATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAg < 2:1772092/150‑1 (MQ=255) aTAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAgg < 1:1517850/150‑1 (MQ=255) cGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCaaa > 1:4505653/1‑150 (MQ=255) gTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCaaaa > 2:2634009/1‑150 (MQ=255) gTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCaaaa > 2:3879327/1‑150 (MQ=255) tATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAAt < 2:446041/150‑1 (MQ=255) tATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAAt < 2:2471864/150‑1 (MQ=255) aTCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATc > 1:2287476/1‑150 (MQ=255) aTCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATc > 1:3778178/1‑150 (MQ=255) aTCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATATATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATc < 2:3003363/150‑1 (MQ=255) agtagtATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGtt > 2:2122707/1‑150 (MQ=255) agtagtATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGtt < 2:4378957/150‑1 (MQ=255) agtagtATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGtt < 2:1307099/150‑1 (MQ=255) gtagtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTa < 1:1509064/150‑1 (MQ=255) gtagtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTa < 1:642486/150‑1 (MQ=255) tagtaTTGTCTGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTAt < 1:820137/150‑1 (MQ=255) tagtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTAt < 1:1301913/150‑1 (MQ=255) tagtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTAt < 1:3084503/150‑1 (MQ=255) gtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCt < 1:3038797/150‑1 (MQ=255) gtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCt < 1:2619989/150‑1 (MQ=255) gtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCt < 1:3893182/150‑1 (MQ=255) gtaTTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCt < 2:3069614/150‑1 (MQ=255) tGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTAttt < 2:3756861/150‑1 (MQ=255) gTCGGAGAATCTATTATATTCTTGAATATATATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTg < 2:4539012/150‑1 (MQ=255) cGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCg < 1:1072546/150‑1 (MQ=255) cGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCTTTATCTATTTGCGAAt > 2:3305915/1‑150 (MQ=255) aaTCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCa < 1:3333385/150‑1 (MQ=255) tCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCAtt < 1:4244949/150‑1 (MQ=255) ttatATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATcc > 2:4419212/1‑150 (MQ=255) ttatATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATcc < 2:2879785/150‑1 (MQ=255) tataTTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCa > 2:1147164/1‑150 (MQ=255) tatTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGt < 1:3403933/150‑1 (MQ=255) atTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGtt < 2:2717705/150‑1 (MQ=255) ttCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGttt < 1:1697868/150‑1 (MQ=255) cTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTAt < 2:1188797/150‑1 (MQ=255) ttGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATc < 1:3279759/150‑1 (MQ=255) tGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCa < 2:1649630/150‑1 (MQ=255) atCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTc < 2:1517723/150‑1 (MQ=255) tataGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAAc > 1:4454014/1‑150 (MQ=255) taGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTa > 1:3317438/1‑150 (MQ=255) aGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTAt < 1:4460814/150‑1 (MQ=255) aGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCtt < 2:1784191/150‑1 (MQ=255) aGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCtt < 2:3937313/150‑1 (MQ=255) aGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCtt < 2:2508254/150‑1 (MQ=255) aGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCtt < 2:2507934/150‑1 (MQ=255) cACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCAc > 1:2059137/1‑150 (MQ=255) tattatAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGAt > 1:2302015/1‑150 (MQ=255) tattatAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGAt > 1:3641766/1‑150 (MQ=255) tataAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGAtgtg > 2:1683931/1‑150 (MQ=255) taAAACCATACTTTATCCATCTGGTGACTACGATCATTTACCTACCAGTGACCATCTTTAAGGAAATAGATGATATGAAGGCCAAAATCGTAATCTATTTTCGAATCATTATAAAGATTATAAAATTAAACTATATTTGAACTAttagtt > 1:3211409/1‑145 (MQ=255) aaaaCCATACTTTCTCCCTCTGGTGACTACGATCATTTACCTTCCAGTGACCATTTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGttt < 2:2392229/150‑1 (MQ=255) aaaCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGtttt > 1:2552101/1‑150 (MQ=255) aaaCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGtttt > 1:2283955/1‑150 (MQ=255) aaCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTa > 1:2264334/1‑150 (MQ=255) aaCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTa < 1:238382/150‑1 (MQ=255) aaCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTa > 2:193008/1‑150 (MQ=255) aCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTAt < 2:4231404/150‑1 (MQ=255) aCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTAt > 1:3272114/1‑150 (MQ=255) aCCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTAt < 1:346292/150‑1 (MQ=255) tACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAAc > 1:2615969/1‑150 (MQ=255) ttCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTg > 2:2243724/1‑150 (MQ=255) ctcCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGcc < 1:2022530/150‑1 (MQ=255) ccATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATTATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCAt < 2:3201221/150‑1 (MQ=255) cATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATg < 1:1740770/150‑1 (MQ=255) cATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATg < 2:2320364/150‑1 (MQ=255) cATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATg < 2:4028938/150‑1 (MQ=255) aTCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATgg > 1:3237612/1‑150 (MQ=255) aTCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATgg < 2:1267503/150‑1 (MQ=255) cTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGgtg < 2:747451/150‑1 (MQ=255) tGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATAAAATTCAAATATATTTTCACGATGTGTTTTATAAACATTTACATTgtgt > 2:3536966/1‑150 (MQ=255) ggTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGtt < 1:3002155/150‑1 (MQ=255) ggTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGtt < 2:3766360/150‑1 (MQ=255) gACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTtgat < 2:4104082/150‑1 (MQ=255) gATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGt > 1:1853663/1‑150 (MQ=255) tttACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACt < 2:682184/150‑1 (MQ=255) tttACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACt < 2:564340/150‑1 (MQ=255) tACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGTCCAAAATCGTTATCTATTTGCGAATAATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATAAAACTTGCCATGGTGTTGATGACTGTTTAAttt > 1:3430994/1‑150 (MQ=255) tACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACttt > 1:3431016/1‑150 (MQ=255) tACCTTCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACttt < 2:244209/150‑1 (MQ=255) tCCAGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTg < 1:994369/150‑1 (MQ=255) ccAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGa < 1:2431171/150‑1 (MQ=255) ccAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGa < 1:1924137/150‑1 (MQ=255) cAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGaa < 2:3345239/150‑1 (MQ=255) aGTGACCATGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAAt > 1:3226503/1‑150 (MQ=255) gACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCt > 2:1030673/1‑150 (MQ=255) gACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCt < 1:4058928/150‑1 (MQ=255) ccATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTa > 1:1168982/1‑150 (MQ=255) aTGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATc > 1:3958409/1‑150 (MQ=255) aTGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATc > 1:3958401/1‑150 (MQ=255) tGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCt < 2:1294640/150‑1 (MQ=255) tGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCt < 1:1953537/150‑1 (MQ=255) tGTTGCAGGAAATAGATAATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCt < 1:1953494/150‑1 (MQ=255) aGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATgg > 1:2939050/1‑150 (MQ=255) aGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATgg < 2:4049152/150‑1 (MQ=255) aaaTAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATGGCtt < 2:3591682/150‑1 (MQ=255) aTAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATGGCTTGa < 1:4401440/150‑1 (MQ=255) tAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATGGCTTGaa > 2:160072/1‑150 (MQ=255) gatATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATGGCTTGAAGAGAt < 1:1015660/150‑1 (MQ=255) gatATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGATTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATGGCTTGAAGAGAt > 1:2196084/1‑150 (MQ=255) | ATTGTAAAGATAAACGTATCAGTAGTATTGTCGGCGAATCTATTATATTCTTGAATATCTATAGAAGGTTCACTATTATAAAACCATACTTTCTCCATCTGGTGACTACGATCATTTACCTTCCAGTGACCATGTTGCAGGAAATAGATGATATGCAGGCCAAAATCGTTATCTATTTGCGAATCATTATCCAGTTTATCAAATTCAACTATCTTTGCACGATGTGTTTTATCAACCTTGCCATGGTGTTGATGACTGTTAACTTTATCTGAATGCTTATCTTGATGGCTTGAAGAGAT > CP009273/3627490‑3627788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |