| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,642,278 | T→C | 10.0% | intergenic (+37/‑17) | arsR → / → arsB | arsenical resistance operon transcriptional repressor; autorepressor/arsenite/antimonite transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,642,278 | 0 | T | C | 10.0% | 845.4 / 65.2 | 270 | intergenic (+37/‑17) | arsR/arsB | arsenical resistance operon transcriptional repressor; autorepressor/arsenite/antimonite transporter |
| Reads supporting (aligned to +/- strand): ref base T (114/129); new base C (17/10); total (131/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 275 total aligned reads displayed.
CGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTG > CP009273/3642129‑3642427 | cggcgAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGtt > 2:1760158/1‑150 (MQ=255)cggcgAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGtt < 1:399999/150‑1 (MQ=255) cgAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTa > 1:4155174/1‑150 (MQ=255) gAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTAt < 1:1331424/150‑1 (MQ=255) aaaTTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATcc < 1:3397585/150‑1 (MQ=255) ttattGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCggg < 2:4346484/150‑1 (MQ=255) tattGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGa < 1:3523164/150‑1 (MQ=255) attGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAg < 2:1705015/150‑1 (MQ=255) gatgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCa > 2:664117/1‑150 (MQ=255) tgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCAtt < 2:3138758/150‑1 (MQ=255) tgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCAtt < 2:3761114/150‑1 (MQ=255) tgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCAtt < 2:2298765/150‑1 (MQ=255) gaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTa > 2:972040/1‑150 (MQ=255) gaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTa < 2:2805399/150‑1 (MQ=255) aGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTAt < 1:2499901/150‑1 (MQ=255) aGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTAt < 1:3803815/150‑1 (MQ=255) ggCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATg < 1:520837/150‑1 (MQ=255) ccTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGtt > 1:1667046/1‑150 (MQ=255) tGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTAc > 1:965490/1‑150 (MQ=255) ggCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACt < 2:2246417/150‑1 (MQ=255) gCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTg < 2:1306704/150‑1 (MQ=255) cGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTgg < 1:461726/150‑1 (MQ=255) gATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGc < 1:1003772/150‑1 (MQ=255) gATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGc > 1:63220/1‑150 (MQ=255) aTGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCa < 1:4076934/150‑1 (MQ=255) tgtgAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAg < 1:3022979/150‑1 (MQ=255) aGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTAt > 1:4452635/1‑150 (MQ=255) aGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCCGTAGGTTACTGGCAGGCGCTAt > 1:3885159/1‑150 (MQ=255) ggAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACATTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATc < 1:3299654/150‑1 (MQ=255) ggAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATc < 1:3436751/150‑1 (MQ=255) gAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGACTGTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCt < 2:1888420/150‑1 (MQ=255) aaaaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCtt > 2:3160232/1‑150 (MQ=255) aaaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCttt < 1:1438995/150‑1 (MQ=255) aaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACCCATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTg < 1:1847929/150‑1 (MQ=255) aaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTg < 1:4125044/150‑1 (MQ=255) aaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTg > 2:4038824/1‑150 (MQ=255) aGGTTCAGGCGATGGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATCTGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGt < 2:4137180/150‑1 (MQ=255) gTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTcc < 2:4192572/150‑1 (MQ=255) gTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTcc < 2:295833/150‑1 (MQ=255) tCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTg < 1:3564033/150‑1 (MQ=255) tCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTg > 2:1140722/1‑150 (MQ=255) tCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACAGATGACTGTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTg < 2:2850220/150‑1 (MQ=255) cAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTCTGTTACTGGCAGGCGCTATCGTTGTCCTGa > 1:4372557/1‑150 (MQ=255) ggCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGAcc < 2:2056849/150‑1 (MQ=255) gCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCa < 1:4460840/150‑1 (MQ=255) gCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCa < 2:106820/150‑1 (MQ=255) cGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCAt < 2:4237155/150‑1 (MQ=255) cGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCAt > 2:1231723/1‑150 (MQ=255) aTTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCg < 2:1364072/150‑1 (MQ=255) ttGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGt < 1:2743901/150‑1 (MQ=255) gTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTAt > 1:908038/1‑150 (MQ=255) tCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTAtt < 2:4410835/150‑1 (MQ=255) gCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGt < 2:1589425/150‑1 (MQ=255) aaCCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTa < 2:2832965/150‑1 (MQ=255) aCCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACAGATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTAt < 2:3581456/150‑1 (MQ=255) tGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTg > 1:2249386/1‑150 (MQ=255) cGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTGTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGc < 2:3225236/150‑1 (MQ=255) gACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGcc < 2:3379195/150‑1 (MQ=255) aCTGTTCCGGGGACAGTAAGAACCTTTGCAGTTAAACATTTAGCTAAACACATATGAATTGTCAGAGGTGTTTTATCCGGGAGGCAGTATGTTACTGGCAGGCGCTATCTGTGTCCTGACCATCGTATTGGTGCTCTGGCAGCCGACAgg > 2:4239578/1‑150 (MQ=255) gTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGttt < 2:1699319/150‑1 (MQ=255) ccGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCCTCGTATTGGTTATCTGGCAGCCGAACGGTTTAgg > 2:1568991/1‑150 (MQ=255) ggggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCa < 2:705138/150‑1 (MQ=255) gggACAGTAAGATCTTTTGCTGTTAAAATTTTAGCTATACACATATGAATTTTCAGTTGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGACAGGTTTAGGCAt < 1:1246527/150‑1 (MQ=255) ggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTACACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATc < 1:3819345/150‑1 (MQ=255) gACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCg < 1:3971538/150‑1 (MQ=255) gTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTg > 1:1193983/1‑150 (MQ=255) aaGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGa > 2:498487/1‑150 (MQ=255) ataaCAATTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATACGTGAGTCATTATGTTACTCGCAGGCGCTATATTTGTCCTGAACATCGTATTGGATATCTGGCAGCCGAAAGTTTTAGGCATCGCCTGTAg > 2:3033301/3‑150 (MQ=255) aGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAg > 1:4274507/1‑150 (MQ=255) aGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGGATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAg > 2:720545/1‑150 (MQ=255) cATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCa > 2:56320/1‑150 (MQ=255) gCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCt < 1:1992741/150‑1 (MQ=255) cAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTc > 1:2040711/1‑150 (MQ=255) cAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTc > 2:932886/1‑150 (MQ=255) cAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTc > 1:2131644/1‑150 (MQ=255) aGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCg > 1:140702/1‑150 (MQ=255) aGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCg > 1:2407502/1‑150 (MQ=255) tAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGgcg > 1:1611595/1‑150 (MQ=255) tAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGgcg < 2:3581694/150‑1 (MQ=255) aaaaaTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGgcgc > 1:2438428/1‑150 (MQ=255) aaaaTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCa > 1:970434/1‑150 (MQ=255) aaaTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAg > 1:2304989/1‑150 (MQ=255) aaTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGt > 2:1746417/1‑150 (MQ=255) aTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTa > 1:1087505/1‑150 (MQ=255) ttAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAAAGCTCGGCGCAGTACt < 2:4074261/150‑1 (MQ=255) gCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGc < 1:4219144/150‑1 (MQ=255) tAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgt > 2:2894050/1‑150 (MQ=255) acaTATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgttagtt > 2:2360405/1‑150 (MQ=255) acaTATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgttagtt < 1:3728333/150‑1 (MQ=255) caTATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgttagtta < 2:4151146/150‑1 (MQ=255) atatGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTAc > 2:3414433/1‑150 (MQ=255) atatGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTAc < 1:1521357/150‑1 (MQ=255) atatGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTAc > 1:2927584/1‑150 (MQ=255) atatGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTAc > 1:1372092/1‑150 (MQ=255) tGAATGTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACggg < 2:2670855/150‑1 (MQ=255) ttttCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTg > 1:2077421/1‑150 (MQ=255) tgtTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCgg > 1:738250/1‑150 (MQ=255) tgtTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCgg > 2:3011320/1‑150 (MQ=255) gtTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCggg < 1:2628528/150‑1 (MQ=255) tttATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTg < 2:4511797/150‑1 (MQ=255) | CGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTG > CP009273/3642129‑3642427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |