| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,662,660 | T→C | 86.3% | intergenic (‑112/‑292) | yhjA ← / → treF | putative cytochrome C peroxidase/cytoplasmic trehalase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,662,660 | 0 | T | C | 86.3% | 703.1 / 84.4 | 241 | intergenic (‑112/‑292) | yhjA/treF | putative cytochrome C peroxidase/cytoplasmic trehalase |
| Reads supporting (aligned to +/- strand): ref base T (14/19); new base C (79/129); total (93/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 241 total aligned reads displayed.
AGGCCGATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAATCGGTATTTTTATA > CP009273/3662514‑3662806 | agGCCGATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAgg > 2:4100084/1‑150 (MQ=255)agGCCGATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAgg > 2:1822915/1‑150 (MQ=255) gCCGATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGaa > 2:4216670/1‑150 (MQ=255) ccGATCGCTGTAATACGTGAGACCATTTTAATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGaat < 2:2822279/150‑1 (MQ=255) ccGATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCACACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGaat < 2:560014/150‑1 (MQ=255) ccGATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGaat > 1:1577842/1‑150 (MQ=255) gATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGaatca < 1:4459599/150‑1 (MQ=255) gATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGaatca > 1:143054/1‑150 (MQ=255) aTCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGaatcaa < 1:1557260/150‑1 (MQ=255) tCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGaatcaat < 2:317111/150‑1 (MQ=255) cgcgGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGaatcaatc > 1:1405843/1‑150 (MQ=255) gcgGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAatcaatca > 1:1228859/1‑150 (MQ=255) cgGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAAtcaatcaa < 1:3688379/150‑1 (MQ=255) gTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAAtt < 2:4142506/150‑1 (MQ=255) tAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCATAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTa < 1:4308874/150‑1 (MQ=255) tAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTa > 2:1739200/1‑150 (MQ=255) aaTACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTAc < 2:2547661/150‑1 (MQ=255) aaTACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTAc < 1:4269534/150‑1 (MQ=255) gTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTTAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCACACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGaa < 1:1956740/150‑1 (MQ=255) tGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCACACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAat < 1:437947/150‑1 (MQ=255) tGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAat < 2:464386/150‑1 (MQ=255) gagaCCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAata > 2:2518708/1‑150 (MQ=255) agaCCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAatat < 2:3216836/150‑1 (MQ=255) agaCCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAatat > 2:2831993/1‑150 (MQ=255) gaCCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAAtata < 2:3504170/150‑1 (MQ=255) gaCCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAAtata < 2:1216220/150‑1 (MQ=255) cATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAAc > 2:734823/1‑150 (MQ=255) tttCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTAt < 2:628142/150‑1 (MQ=255) ttattCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATa < 2:355503/150‑1 (MQ=255) tattCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATaa < 2:513304/150‑1 (MQ=255) tattCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATaa < 2:2777369/150‑1 (MQ=255) tcttcCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGAt > 2:3131763/1‑150 (MQ=255) tcttcCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGAt < 2:354388/150‑1 (MQ=255) cttcCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATa < 2:2206542/150‑1 (MQ=255) ttcCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAg > 1:2934983/1‑150 (MQ=255) tcCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGc > 1:983708/1‑150 (MQ=255) cccTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGcc < 1:2520884/150‑1 (MQ=255) ccTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCt > 1:732963/1‑150 (MQ=255) ccTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCt < 2:1217956/150‑1 (MQ=255) ccTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCt > 1:4048541/1‑150 (MQ=255) ccTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCt < 1:628296/150‑1 (MQ=255) tctcGGTGGTGATTTATTGTGACCAAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCtgt < 1:2296072/147‑1 (MQ=255) tCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCtgt < 1:3021011/150‑1 (MQ=255) aCGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGc > 1:2615144/1‑150 (MQ=255) ggtggtGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCt > 2:1157128/1‑150 (MQ=255) ggtggtGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCt > 1:3324943/1‑150 (MQ=255) gtggtgAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTa < 1:206131/150‑1 (MQ=255) gtggtgAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTa < 1:1766694/150‑1 (MQ=255) tggtgAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTAt < 1:2458173/150‑1 (MQ=255) ttATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAg < 2:2643355/150‑1 (MQ=255) ttATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAg < 2:4291401/150‑1 (MQ=255) aTTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGAt < 1:2844614/150‑1 (MQ=255) tgtgACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCa > 1:1903763/1‑150 (MQ=255) tgtgACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCa > 2:3716361/1‑150 (MQ=255) tgACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAgg < 2:4386860/150‑1 (MQ=255) ccAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATg > 2:2013024/1‑150 (MQ=255) cAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATgg > 1:371571/1‑150 (MQ=255) gAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCa > 1:2789869/1‑150 (MQ=255) gAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCa < 1:3939429/150‑1 (MQ=255) gAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCa > 2:2914477/1‑150 (MQ=255) aTTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATc < 2:3372069/150‑1 (MQ=255) tCCAGAATGCTTCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGa < 2:2750616/150‑1 (MQ=255) tCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGa < 1:2056969/150‑1 (MQ=255) cAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGAtt < 2:311006/150‑1 (MQ=255) aaTGCTGCACACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTgcg < 1:1118051/150‑1 (MQ=255) tgctgcAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTgcggc > 2:961935/1‑150 (MQ=255) gctgcAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTgcggcg < 1:481180/150‑1 (MQ=255) aaaCGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGc > 1:1890955/1‑150 (MQ=255) aaaCGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGc > 1:963985/1‑150 (MQ=255) aaCGTCTCTGCGAGACAAAGCCATCATAAAAATCAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCa < 2:3956678/150‑1 (MQ=255) aaCGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCa < 1:698047/150‑1 (MQ=255) aCGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAg < 1:2136007/150‑1 (MQ=255) gTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGa < 2:2314064/150‑1 (MQ=255) tctcTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGAt < 1:3477879/150‑1 (MQ=255) ctctGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGAtt < 1:3569067/150‑1 (MQ=255) gCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAAt < 2:3763550/150‑1 (MQ=255) cGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATg < 2:4258671/150‑1 (MQ=255) gagaCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGt > 1:4081376/1‑150 (MQ=255) agaCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGtt < 2:1946683/150‑1 (MQ=255) agaCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGtt > 1:2542254/1‑150 (MQ=255) gaCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTc < 2:4008535/150‑1 (MQ=255) gaCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTc < 2:534169/150‑1 (MQ=255) aCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCt < 1:4141558/150‑1 (MQ=255) aCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCt > 1:1036929/1‑150 (MQ=255) aCAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCt < 1:3597588/150‑1 (MQ=255) ccATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCtgaaaat < 1:1642936/150‑1 (MQ=255) ccATCATAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCtgaaaat < 1:644881/150‑1 (MQ=255) catAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCtgaaaatgaaa < 2:446048/150‑1 (MQ=255) atAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCtgaaaatgaaaa < 2:1560620/150‑1 (MQ=255) tAAAAAACAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGaaaaa > 1:1787437/1‑150 (MQ=255) aaaCAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATAACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAaacaac > 1:530420/1‑150 (MQ=255) aaCAGGGAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAacaaca > 2:1685727/1‑150 (MQ=255) ggAGATACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCaaa > 2:868154/1‑150 (MQ=255) gagaTACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAAt < 2:2889231/150‑1 (MQ=255) agaTACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAATc < 2:325363/150‑1 (MQ=255) agaTACGCTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAATc < 2:2934983/150‑1 (MQ=255) gaTACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAATCg < 2:2871754/150‑1 (MQ=255) cTTTTTGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATTTCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAATCGGTAttt < 1:3759343/150‑1 (MQ=255) ttGACAGGAATCAATCAATTACATTAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTACTGAAAATGAAAAACAACACCAAATCGGTATTTTtat < 1:786466/150‑1 (MQ=255) tGACAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAATCGGTATTTTtata < 2:143054/150‑1 (MQ=255) | AGGCCGATCGCGGTAATACGTGAGACCATTTTCATTATTCTTCCCTCACGGTGGTGAGTTATTGTGACCCAGAAAATTTTCCAGAATGCTGCAAACGTCTCTGCGAGACAAAGCCATCATAAAAAACAGGGAGATACGCTTTTTGATAGGAATCAATCAATTACATGAATATAAACTATCAATAAGATAGCCTGTGCCTATTACCCAGATCAGGAATGGCATATCATGATTGCGGCGAGAGCAGGATTGAATGTTCTGAAAATGAAAAACAACACCAAATCGGTATTTTTATA > CP009273/3662514‑3662806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |