Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,822,340 A→C 17.2% Q12H (CAA→CAC) ‡ xanP → xanthine permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,822,3400AC17.2% 342.3 / 14.7 209Q12H (CAA→CAC) ‡xanPxanthine permease
Reads supporting (aligned to +/- strand):  ref base A (113/54);  new base C (15/27);  total (128/81)
Fisher's exact test for biased strand distribution p-value = 3.09e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 213 total aligned reads displayed.

TATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822192‑3822488
                                                                                                                                                    |                                                                                                                                                     
 ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAAAGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAcc                                                                                                                                                     >  2:2337276/1‑150 (MQ=255)
   aaaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAAAGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑gg                                                                                                                                                  >  1:3640991/1‑150 (MQ=255)
    aaaaaGTGCATTTATCTCATTTATATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCAAGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGt                                                                                                                                                 <  2:2216760/150‑1 (MQ=255)
    aaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGt                                                                                                                                                 >  1:688140/1‑150 (MQ=255)
      aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGGTg                                                                                                                                               >  1:589183/1‑150 (MQ=255)
      aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTg                                                                                                                                               <  1:3616222/150‑1 (MQ=255)
      aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTg                                                                                                                                               <  2:2705326/150‑1 (MQ=255)
           gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑CGTTgcgccg                                                                                                                                          >  1:1340241/1‑148 (MQ=255)
           gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCCTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGGTGCGCAg                                                                                                                                          >  2:2802898/1‑150 (MQ=255)
             aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCacac                                                                                                                                        >  2:389780/1‑150 (MQ=255)
              tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACt                                                                                                                                       <  2:688140/150‑1 (MQ=255)
                tATCTAATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGTTTGTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCa                                                                                                                                     <  2:1416053/150‑1 (MQ=255)
                 aTCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCaa                                                                                                                                    >  2:2919623/1‑150 (MQ=255)
                   ctcATTTAATTATTTAGATGAGGATGTGGCAAACGTTTGATGTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCaaaa                                                                                                                                  <  2:1650640/150‑1 (MQ=255)
                   ctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑CGGTGCGCAGACACaaaa                                                                                                                                  >  1:3154749/1‑150 (MQ=255)
                   ctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCaaaa                                                                                                                                  >  2:1490783/1‑150 (MQ=255)
                    tcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCCC‑GGGTGCGCAGACACAAAAc                                                                                                                                 >  1:140987/1‑150 (MQ=255)
                    tcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAAc                                                                                                                                 >  2:1753182/1‑150 (MQ=255)
                      aTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑CGTTGCGCACACACAAAAAAg                                                                                                                               >  1:2963175/1‑150 (MQ=255)
                       tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑CGGTGCGCAGACTCAAAAAAga                                                                                                                              >  1:3914957/1‑149 (MQ=255)
                           attatTTAGATGAGTATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAATTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAAc                                                                                                                          <  2:2969083/148‑1 (MQ=255)
                           attatTTAGATGAGGTTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAAc                                                                                                                          <  2:351701/148‑1 (MQ=255)
                                 tAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCCC‑CCTTGCGCACACACAAAACAGCCAACAGAttt                                                                                                                    >  1:1027303/1‑150 (MQ=255)
                                 tAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑CGTTGCGCAGACTCAAAACAACGAACAGAttt                                                                                                                    >  1:3730493/1‑150 (MQ=255)
                                  aGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTa                                                                                                                   >  2:4471254/1‑150 (MQ=255)
                                   gATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTAc                                                                                                                  <  2:2764697/150‑1 (MQ=255)
                                    aTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑CGGTGCGCACAAACAAAACACCGAACAGAttttaa                                                                                                                 >  1:40158/1‑147 (MQ=255)
                                     tGAGGATGTGGCACACGTTTGCTTTTCTCTTTCGGTCAGCTAAAAAGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACG‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCg                                                                                                                <  2:3519193/150‑1 (MQ=255)
                                      ttggATGTGGAAATCTTTTGCTTTTATCTTTCTGTCAGCTAAAATGCCCGTTTTGCTACCTGGGTTTTTTTTTCTTTGTTTTTTTCCACCCTCGAGACACAAAATGCCAAAGG‑TGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGt                                                                                                               <  1:23976/148‑1 (MQ=255)
                                                   tcGTTTGCTTTTCTCTTTCGTTCAGATAAAATGCCCGCTTTTCTACCAGGTGTTTTTTTTCTTTGTTTTTTACCACCCTCGAGTCATAAAATGCGCACCG‑GGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTc                                                                                                  <  1:2177427/149‑1 (MQ=255)
                                                    cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGtac                                                                                                 >  2:481880/1‑148 (MQ=255)
                                                    cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTcc                                                                                                 >  2:1337186/1‑150 (MQ=255)
                                                    cGTTTGCTTTTCTCTTTCGGTCAGCTAAAAAGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCGTGAAGATCGTcc                                                                                                 >  2:3246385/1‑150 (MQ=255)
                                                          cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCCC‑GGGTGCGCCGACTCAAAACAGCGAACTGGTTTAACGTCTTGTAGATCGTCcgccgca                                                                                           >  2:2319741/1‑149 (MQ=255)
                                                          cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCt                                                                                           >  2:3359896/1‑150 (MQ=255)
                                                           ttttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCtt                                                                                          >  2:2640625/1‑150 (MQ=255)
                                                           ttttCTCTTTCGGACCTATAAATGGCCCTATTGGCTACCCCGGTTTTTTTTTCGTTGTGTTTTCCCCCCCTCTTGACCTAAATTGCCCACCC‑GGTCGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCtt                                                                                          <  1:986287/150‑1 (MQ=255)
                                                            tttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTc                                                                                         >  2:2261340/1‑150 (MQ=255)
                                                              tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGTTGCGCAGACTCAAAACAGCGAACAGATTTACAGTCTTTAAGATCGTCcgccgcgtact                                                                                       >  1:3692771/1‑145 (MQ=255)
                                                              tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCt                                                                                       >  2:1977801/1‑150 (MQ=255)
                                                              tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACACAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCt                                                                                       >  1:1810419/1‑150 (MQ=255)
                                                              tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑CGTTGCGCAGACACAAAACACCCAACAGATTTACCGTCATGAAGAACGTCccccgcgacca                                                                                       >  1:2574385/1‑145 (MQ=255)
                                                                  tttCGGTCAGCTAAAATGCCCGCTTTCCTACCAGGTTTTTGTTTTCGTTTTCTGTTACCCCCCTCGATTCATAAAATGCGCAACC‑GGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCaaa                                                                                   <  1:1470949/150‑1 (MQ=255)
                                                                    tgggTCCGCTAAATGGCCGGCTTGGCTACCAGGGTTTTTTTTTCGTTGTGTGTGTCCCCCCCCGAGTCAGAAACGGCGCACGG‑GGGGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcc                                                                                 <  1:2324600/148‑1 (MQ=255)
                                                                    tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCACCC‑GGTTTGGCCGACTCAAAAAAGCGAAATGATTTACCGGCTTGACTTTAGTCCGCCCCTGCCTCAAAcc                                                                                 >  1:3503596/1‑150 (MQ=255)
                                                                    tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGTTGCGCACACAAAAAAAACCGAACTGATTTTACTAGTTTTAGAAACTACGCCGCTTCCTCAAAca                                                                                 >  1:3084859/1‑149 (MQ=255)
                                                                    tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑CGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGTAGATAGTCCGCCGCTTCCTCACAcc                                                                                 >  2:1501367/1‑150 (MQ=255)
                                                                    tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACAGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCGCAAAcc                                                                                 >  1:304993/1‑150 (MQ=255)
                                                                        tCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGACAATGCGCACCC‑GGTTGCGCCGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGt                                                                             >  2:3439878/1‑150 (MQ=255)
                                                                         cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAAC‑CGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGTAGATCTTCCGCCGCTTCCACAAACCCTGtt                                                                            >  2:2579241/1‑150 (MQ=255)
                                                                             tAAAAAGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGGTGCGCCGACTCAAAAAAGCGAACAGATTTAGCGTGTTGTAGATCGTCCGCCGCGTGCGCAAAACCAGtgtggc                                                                        >  1:3826262/1‑148 (MQ=255)
                                                                               aaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgc                                                                      >  2:284315/1‑150 (MQ=255)
                                                                                aaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgcc                                                                     >  2:4288257/1‑150 (MQ=255)
                                                                                    cccGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGGTGCGCAGACTCAAAAAAGCGAACAGATTTAACGTCTTGAAGATAGTCCACCGCATCCTCAAAACCAGTTTGCCGCCTGTc                                                                 >  1:851210/1‑150 (MQ=255)
                                                                                    cccGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCCCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCACAAAACCTGTTTGCCCCCAGTc                                                                 >  2:4361807/1‑150 (MQ=255)
                                                                                     cctcTTTGCTACCAGTGTTTTGTTTTCGTTGTCTTTCACCCCCCTCTAGACACAAAAGGCGCAACC‑GGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCa                                                                <  1:4203238/147‑1 (MQ=255)
                                                                                      ggCTTTGCTACCTGGGGTTTGTTTTGGTTGTGTGTTACCACCCTCGAGTCAGAAAATGCGCACCG‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAg                                                               <  1:1659479/149‑1 (MQ=255)
                                                                                      cGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAg                                                               >  2:3017337/1‑150 (MQ=255)
                                                                                        cTTTGATACCCCGGGATTGTTTTCGATGTCTGTTTCCCCCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCa                                                             <  2:4009087/150‑1 (MQ=255)
                                                                                         tttGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑CGGTGCGCAGACACAAAACACCGAACAGATTTACCCTCATGAAGATCGTCCGCCCCGTCCACAAACCCGGTTTGCCGCCAGTCCGCAt                                                            >  2:421890/1‑150 (MQ=255)
                                                                                           tGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATct                                                          <  2:921100/150‑1 (MQ=255)
                                                                                           tGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCTGTCAGCATct                                                          >  2:3856230/1‑150 (MQ=255)
                                                                                           tGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACGGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATct                                                          >  2:1845698/1‑150 (MQ=255)
                                                                                           tGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTTTTTGCCGCCTGTCAGCATct                                                          <  2:1033226/150‑1 (MQ=255)
                                                                                                ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTAGCCGCCTGTCAGCATCTGCTgg                                                     >  2:2195744/1‑150 (MQ=255)
                                                                                                ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGGTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTTAAGAAAGTCCGCCGCATCCTCAAAACCACTTTGCCGCCAGTAAGCATCATCTgg                                                     >  1:2501174/1‑150 (MQ=255)
                                                                                                 cACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑CGTTGCGCAGACACAAAACAACCAACAGATTTACAGTCATGAAGATCGTCCCCCGCATCCACAAAAACAGTTTGCCGCCTGTCAGCATCAGCAGGc                                                    >  1:4366489/1‑150 (MQ=255)
                                                                                                    gggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                 <  2:4152074/150‑1 (MQ=255)
                                                                                                    gggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                 >  2:1043521/1‑150 (MQ=255)
                                                                                                     gtaTTGTTTTCGATGTCTGTTTCCCCCCTCGAGACAGAAATGGCGCACCC‑GGTCGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATg                                                <  1:381321/148‑1 (MQ=255)
                                                                                                     ggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑CGGTGCGCAGACACAAAACAGCCCACAGATTTACCCACGTGAAGATCGTCCGCCGCAGCCTCAAACCCAGGTTGCCGCCACTCAGCAACTGCTGGCGagg                                                >  1:3383499/1‑148 (MQ=255)
                                                                                                      gtttGTTTTCGTTGTCTGTTTCCCCCCTCGAGTCAGAAATGGCGCACCG‑GGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                               <  1:3699805/148‑1 (MQ=255)
                                                                                                      gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATAGTCCGCCGCTTCCTCAAACACTGTTTGACGCCTGTCAGCATCTGCTGGCGATGt                                               >  2:23159/1‑150 (MQ=255)
                                                                                                        tttttttCTTTGTCTGTTACCACCCTCGAGTCACAAATTGCGCAACC‑GGTCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTc                                             <  1:1980959/147‑1 (MQ=255)
                                                                                                         tGTTTTCTCTTTCTGTTCCCACCCGCGAGTCATAAAATGCGCACCG‑GGGTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCg                                            <  1:813626/150‑1 (MQ=255)
                                                                                                          gTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGt                                           >  2:2540681/1‑150 (MQ=255)
                                                                                                          gTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACACAAAACAGCGAACTGTTTTAAAGTCTTTAATATCGTCCGCCGCTTCCTCAAACCCAGTTTTGCGCCGGTCAGCATCTGCTGGCGATGTTCGt                                           >  1:1098981/1‑150 (MQ=255)
                                                                                                           ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGtt                                          >  2:1812046/1‑150 (MQ=255)
                                                                                                           ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGtt                                          >  2:1810978/1‑150 (MQ=255)
                                                                                                            tttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCCC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATAGTCCGCCGCTTCCGCAAACCCGGTTTTCCGCCTGTCAGCATCTGCTGGCGCGGTTCGTTg                                         >  2:1119760/1‑150 (MQ=255)
                                                                                                            tttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTg                                         >  2:4108805/1‑150 (MQ=255)
                                                                                                             ttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGc                                        >  2:961269/1‑150 (MQ=255)
                                                                                                             ttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACC‑GGTTGCGCAGACACAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCATCCTCAAACCCGGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGc                                        >  2:808429/1‑150 (MQ=255)
                                                                                                                gATGTCTGTTTCCACCCTCGAGTCAGAAAAGGCGCCACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGt                                     <  2:4173100/150‑1 (MQ=255)
                                                                                                                  tGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTTCGGTGa                                   >  2:3769627/1‑150 (MQ=255)
                                                                                                                     ctgtcaccACCCTCGAGACCGAACATGCGCCACC‑GGGCGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCa                                <  1:1898075/144‑1 (MQ=255)
                                                                                                                      tGTTCCCCCCCTCGAGTCAGAAACTGCGCACCG‑GGGGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCAc                               <  1:2939514/150‑1 (MQ=255)
                                                                                                                         ttCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACACAAAACAGCGAACTGATTTACCGTCTTGAAGATAGTCCGCCGCGTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAAGTTCGTTGCGGTGATCACGcc                            >  2:3209740/1‑150 (MQ=255)
                                                                                                                                  cGAGTCAGAAATTGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTAtt                   <  2:36834/150‑1 (MQ=255)
                                                                                                                                      tCAGAAAAGGCGCACCC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATc               <  2:3154749/150‑1 (MQ=255)
                                                                                                                                        aGAAAATGCGCACCC‑GTTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg             <  2:4529658/150‑1 (MQ=255)
                                                                                                                                        aGAAAAGGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg             <  2:2961937/150‑1 (MQ=255)
                                                                                                                                           ataggcgcAACG‑GGGGCCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa          <  1:1634254/146‑1 (MQ=255)
                                                                                                                                           aattGCGCACCG‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa          <  1:2458852/147‑1 (MQ=255)
                                                                                                                                            atatgccAACCGGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa          <  1:2703118/144‑1 (MQ=255)
                                                                                                                                            aaTGCGCAACC‑GGTTGCGCAGACTCAAAACAGTGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAg         >  2:2383944/1‑150 (MQ=255)
                                                                                                                                             aggcgcAACC‑GGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCATCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAgt        <  2:2602449/148‑2 (MQ=255)
                                                                                                                                             aTGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAgg        >  1:1401222/1‑150 (MQ=255)
                                                                                                                                                   aaCG‑GGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg  <  1:3391272/150‑1 (MQ=255)
                                                                                                                                                   aaCC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg  >  2:3834942/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACC‑GGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822192‑3822488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑