| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,844,906 | G→T | 12.1% | S413S (TCC→TCA) | ilvB ← | acetolactate synthase 2 large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,844,906 | 0 | G | T | 12.1% | 1137.6 / 89.6 | 328 | S413S (TCC→TCA) | ilvB | acetolactate synthase 2 large subunit |
| Reads supporting (aligned to +/- strand): ref base G (129/159); new base T (23/17); total (152/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 338 total aligned reads displayed.
CCAGCTGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACGGATCGCACGC > CP009273/3844758‑3845055 | ccAGCTGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCgg > 2:1040702/1‑150 (MQ=255)ccAGCTGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCgg < 1:1004648/150‑1 (MQ=255)ccAGCTGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCgg > 2:1040365/1‑150 (MQ=255) cAGCTGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGa > 2:3845408/1‑150 (MQ=255) aGCTGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAg > 2:1916205/1‑150 (MQ=255) tGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTc < 1:3140417/150‑1 (MQ=255) tGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTc < 2:3786168/150‑1 (MQ=255) ttCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCa > 2:540433/1‑150 (MQ=255) tCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCAc > 2:2377850/1‑150 (MQ=255) cACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACt < 2:4291918/150‑1 (MQ=255) ggCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCg < 1:767532/150‑1 (MQ=255) cGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTg < 1:550948/150‑1 (MQ=255) cGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTg > 1:696240/1‑150 (MQ=255) ggTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTgg > 1:2422342/1‑150 (MQ=255) tCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGc > 1:3631085/1‑150 (MQ=255) tCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGc < 2:2387108/150‑1 (MQ=255) gCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGa > 1:13267/1‑150 (MQ=255) gCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGa < 1:2962048/150‑1 (MQ=255) ccATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGAt < 2:3987120/150‑1 (MQ=255) tcCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGc < 2:1792514/150‑1 (MQ=255) cTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCgg > 2:3702142/1‑150 (MQ=255) tGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGa < 1:3297686/150‑1 (MQ=255) gAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGAt > 1:2586225/1‑150 (MQ=255) atatTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATaa > 1:181146/1‑150 (MQ=255) atTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGc < 1:3087297/150‑1 (MQ=255) atTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGc > 2:3158179/1‑150 (MQ=255) atTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGc < 1:1570289/150‑1 (MQ=255) atTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGc > 1:1362111/1‑150 (MQ=255) ttCATCATTAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCTCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCt < 2:2329287/150‑1 (MQ=255) tcatcatcaGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCtt < 2:920767/150‑1 (MQ=255) atcaGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGcgcg < 2:4186145/150‑1 (MQ=255) aGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTc > 2:1843909/1‑150 (MQ=255) aGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTc > 2:74116/1‑150 (MQ=255) aGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTc < 1:1144190/150‑1 (MQ=255) ggCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTcc < 1:2409953/150‑1 (MQ=255) gCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACAt < 2:2261513/150‑1 (MQ=255) ccGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATc < 2:2391053/150‑1 (MQ=255) gTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTg > 1:970058/1‑150 (MQ=255) tCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGa > 1:2698722/1‑150 (MQ=255) cGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGAt > 2:1192751/1‑150 (MQ=255) gCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATg > 1:4427997/1‑150 (MQ=255) gCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATg > 1:3910393/1‑150 (MQ=255) cGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCt < 1:273604/150‑1 (MQ=255) cGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCt > 2:3204379/1‑150 (MQ=255) cGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCC‑AAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTg > 1:1040517/1‑150 (MQ=255) ggAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTg < 2:664677/150‑1 (MQ=255) gaAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGAcc > 1:1975870/1‑150 (MQ=255) taacacaacacTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCa < 2:2230270/149‑1 (MQ=255) aaaCACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCa < 1:2041598/150‑1 (MQ=255) aaaCACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCa > 2:2583365/1‑150 (MQ=255) cacaacacTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACg > 1:1498342/1‑150 (MQ=255) acaacacTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGt > 1:1212291/1‑150 (MQ=255) cacTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCggt < 1:3440674/150‑1 (MQ=255) cTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCggtgg > 1:2707247/1‑150 (MQ=255) ttGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGgtggtg < 1:3020468/150‑1 (MQ=255) ttGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGgtggtg < 1:626509/150‑1 (MQ=255) tGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGa > 1:3693047/1‑150 (MQ=255) gATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATaa > 2:123208/1‑150 (MQ=255) ccGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCTAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTg < 1:142893/150‑1 (MQ=255) cGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGc > 2:1147608/1‑150 (MQ=255) gggTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCa < 1:1864555/150‑1 (MQ=255) ggTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCAt < 1:2931845/150‑1 (MQ=255) gtCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTg < 2:3389342/149‑1 (MQ=255) tCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGt < 1:4386102/150‑1 (MQ=255) tCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGt > 2:4444060/1‑150 (MQ=255) tCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGt > 2:1810214/1‑150 (MQ=255) cGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTc < 2:3042083/150‑1 (MQ=255) gCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCa > 1:3183127/1‑150 (MQ=255) gCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCa < 2:3609687/150‑1 (MQ=255) ccAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCAt < 2:347589/150‑1 (MQ=255) cgcagcgcCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGac > 2:186775/1‑150 (MQ=255) gcagcgcCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGaca < 2:612905/150‑1 (MQ=255) cagcgcCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGacac < 1:2262136/150‑1 (MQ=255) agcgcCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGAcaca > 1:369573/1‑150 (MQ=255) gcCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAggc < 1:2097389/150‑1 (MQ=255) aTCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCa < 1:3521569/150‑1 (MQ=255) gccgcAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACg < 2:1997528/150‑1 (MQ=255) ccgcAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACgg < 1:4531426/150‑1 (MQ=255) aggcaggcCAAAACCCATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGtt < 1:3178418/150‑1 (MQ=255) caggcCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCACCGGCGTTGAt > 2:213672/1‑150 (MQ=255) ggcCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCa > 1:2806662/1‑150 (MQ=255) gcCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAg > 1:3974719/1‑150 (MQ=255) aaaaCCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGcc < 1:4312709/150‑1 (MQ=255) aaaaCCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGcc > 2:1968743/1‑150 (MQ=255) aaaCCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCg > 2:2493741/1‑150 (MQ=255) ccATCGTGCCCAGCCCACCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAAt > 1:4116532/1‑150 (MQ=255) tCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGc < 2:2891284/150‑1 (MQ=255) cGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCt > 2:844382/1‑150 (MQ=255) gTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCtt > 2:462714/1‑150 (MQ=255) gTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCtt < 2:3360614/150‑1 (MQ=255) tGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTa < 2:1498342/150‑1 (MQ=255) cccagcccaCCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAAc < 2:13267/150‑1 (MQ=255) cccagcccaCCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAAc > 2:2672918/1‑150 (MQ=255) ccagcccaCCTGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACg < 1:1265925/150‑1 (MQ=255) gcccaCCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACGGAt > 1:4538868/1‑150 (MQ=255) gcccaCCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACGGAt < 2:2636203/150‑1 (MQ=255) ccaCCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACGGATCg > 2:4088487/1‑150 (MQ=255) ccaCCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACGGATCg > 1:586203/1‑150 (MQ=255) cGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACGGATCGCACg < 1:1651198/150‑1 (MQ=255) cGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAAAGGATCTCACg > 2:432405/1‑150 (MQ=255) | CCAGCTGATTTTCACTGGCGGTCGCCATCTCCTGAATATTCATCATCAGGCTGCCGTCGCCGGAGAAACACAACACTTTGCGATCCGGGTTCGCCAGCGCAGCGCCAATCGCCGCAGGCAGGCCAAAACCCATCGTGCCCAGCCCACCGGAGGTCAGCCACTGGCGTGGGCGATTGAGCGGATAAGCTTGCGCGGTCCACATCTGATGCTGACCAACGTCGGTGGTGATAATTGCATTGTCATCGACACAGGCGGCAACGGCGTTGATCAGGCCGTAATGGCTTAACGGATCGCACGC > CP009273/3844758‑3845055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |