| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,896,189 | G→T | 17.9% | T291T (ACC→ACA) | bglB ← | cryptic phospho‑beta‑glucosidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,896,189 | 0 | G | T | 17.9% | 582.5 / 91.7 | 210 | T291T (ACC→ACA) | bglB | cryptic phospho‑beta‑glucosidase B |
| Reads supporting (aligned to +/- strand): ref base G (100/72); new base T (27/11); total (127/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 214 total aligned reads displayed.
CCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896040‑3896338 | ccAACCGTATCAATTTGCCACCCCCACTCTTAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGTAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACg < 1:4465813/150‑1 (MQ=255) cAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACgg > 1:2397589/1‑150 (MQ=255) ccGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTAt > 2:2571882/1‑150 (MQ=255) aTCAATTTGCCACCCCCACTCTTAACTTTTCAGATGCGGATTGGGT‑ATAATATTCATTTTGTTGCCCTGCGAATTTTTATTAATGCTTTCGTCTTGGGAAACACAACCAGTCTTTTAATAACTAAAAGAGATGAACTCGACGGTATGttt < 2:2212324/150‑1 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaa > 2:3176110/1‑150 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCAGATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaa > 1:1114025/1‑150 (MQ=255) aTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaaa > 1:4249665/1‑150 (MQ=255) tttGCCACCCCCACTCTGAACTTTTCAGATGCGGTTTGGGT‑ATAATATTCTGTTTGTTGCCCTGCGAATTTTTATTAATGCTTTCGTCGTGGTAAACACAACCATTCATTTAATAAATAAACGAGATCAAATCGACGGTATGTTTTAAAt < 2:933442/150‑1 (MQ=255) cccccACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGc > 1:4164889/1‑150 (MQ=255) ccccACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCg > 1:2075007/1‑150 (MQ=255) cACTCTTAACTTTTCATTGGGGTATTGGGT‑ATCATATTCATTATGTTGCCCTGCGAATTTTTATTAATGCTTTCGTCGTGGTAAAAACACCCAGTCTTGTATTAACTAAAAGCGATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCa < 2:4017522/150‑1 (MQ=255) tctGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACtt > 1:1323797/1‑150 (MQ=255) ctGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACttt > 1:2167820/1‑150 (MQ=255) tGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTc > 1:1585339/1‑150 (MQ=255) taaCTTTTCAGATGCGTTTTGGGT‑ATCATTTTCATTTTGTTGCCCTGCGATTTTTTTTTAATGCTTTCGTCGTGGTAAACACAACCAGTCTTTTAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCa < 2:23888/149‑1 (MQ=255) aCTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGAGTCACTTTCAGt > 2:2943513/1‑150 (MQ=255) cTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTc > 2:4029811/1‑150 (MQ=255) cTTTTCAGATG‑GGTTTGGGGTATAATATTATTTTTGTTGCCCTGCTAATTTTTTTTATTGCTTTCGTCGTGGTAAAAAAAACCAGTCTTTTAATAACTAAAATAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTc < 2:3486971/150‑1 (MQ=255) ttttCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCa > 1:1229065/1‑150 (MQ=255) ttCAGTTGGGTATTGGGG‑ATAATATTCTGTATGTTGCCCTGCGAATTTTTATTAATGCTTTCGTCGTGGTAAAAACAACAAGACATGTAATAAATAAAAGATATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCAtc < 1:2994274/150‑1 (MQ=255) cAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCAtctc > 2:1404991/1‑150 (MQ=255) aGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCa > 2:2794647/1‑150 (MQ=255) ttgggttttGGGG‑ATAATATTCATTTTGTTGCCGTGCTCTTTTTTTTTATGGCTTTGGGGGTGGTAAACACACCCATTCTTGTAATAAAAAAAATATATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAAt < 1:1636940/143‑1 (MQ=255) aTGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAAt > 1:708644/1‑150 (MQ=255) aTGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAAt > 2:2653381/1‑150 (MQ=255) gggttttGGGT‑ATAATTTTAAGTTTGTTGCCGTGCGCTTTTTTATTATTGTTTTCGTCGTGGCAAAAACACCCAGAAATTTAATAAATAAATGATTTTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATgg < 2:10419/145‑1 (MQ=255) gttttGGGT‑ATAATTTTCTTTTTGTTGCCGTGCTATTTTTTATTATTGTTTTGTTGTTGGTAAAAACACCCCGTATTTTAATAAATAAAATAGATCAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTg < 1:212138/147‑1 (MQ=255) ggtttGGGT‑ATCATATTCTGTTTTGTGCCCTGCGAATTTTTATTATTGCTTGCGTCGTGGTAAACACAACCAGTAATTTAATAAATAAACGAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTg < 1:3710132/147‑1 (MQ=255) ggATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTg > 2:3886670/1‑150 (MQ=255) ggATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTg > 1:4278513/1‑150 (MQ=255) taTTGGGG‑ATCATATTCTTTTTGTGGCCCTGCGCTTTTTTATTAATGATTTCTTGGTGTTAAACACACCCAGTATTTTAATAAATAAAAGATATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGa < 2:2726331/149‑1 (MQ=255) aTTGGGT‑ATAATATTCAGTTTGTTGCCCTGCGCTTTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGat < 2:2498841/150‑1 (MQ=255) tGGGG‑CTCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGatat > 2:897002/1‑150 (MQ=255) ggg‑ATAATATTCAGTATGTTGCCCTGCGAATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATtg < 2:2992771/150‑1 (MQ=255) cATATTCAGTATGTTGCCCTGCGAATTTTTATTATGGCTTGCGTCGGGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTc < 2:3313745/150‑1 (MQ=255) atatTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTcg > 2:2378039/1‑150 (MQ=255) atTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTcgcg > 2:3277180/1‑150 (MQ=255) atTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTcgcg > 1:3675215/1‑150 (MQ=255) ttCAGTTTGTTGCCCTGCGCATTTTTATTAATGATTTCGTCGTGGGAAACACACCCATTCATGTAATAAATAAAAGAGATGAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCgg < 2:3816100/150‑1 (MQ=255) cAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaa > 1:549851/1‑150 (MQ=255) tgttttttGCCCTGCGCATTTTTATTAATGATTTCGTCGTGGTAAACACAACCAGTCTTGTAATACCTAAAAGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaag < 2:3714668/144‑1 (MQ=255) tgtttGTTGCCCGGCGAATTTTTATTAATGCTTTCGTCGTGGTAAACACAACCCTTCATTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaag < 2:3713704/146‑1 (MQ=255) aGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTTTGGTCGCGgaag > 1:3887458/1‑150 (MQ=255) aGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCCTGGGAAACACAACCAGTCATGTAATAACTAAAAGATATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGTTATTTTGGTCGCGtaag > 1:3887583/1‑150 (MQ=255) tATGTTGCCCGGCGAATTTTTATTAAGGTTTTCGCCGTGGAAAACACAACCAGTCATTAAAAAACTAAACGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaagaa < 1:2116285/150‑1 (MQ=255) gTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACg > 1:3471502/1‑150 (MQ=255) cccTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGc > 2:494261/1‑150 (MQ=255) ccTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCa > 1:3971390/1‑150 (MQ=255) ccTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCa > 1:3580271/1‑150 (MQ=255) cTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCat > 1:1953304/1‑150 (MQ=255) cTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCat > 1:1278308/1‑150 (MQ=255) ctattttttATTAATGATTTCGTCGTGGTAAACACAACCAGTATTTTAATAAATAAAAGATATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCAtata < 2:1902631/146‑1 (MQ=255) cgcATTTTTATTAATGCTTTCGTCGTGGGAAAAACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCAtata > 1:839281/1‑150 (MQ=255) gcATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAg > 2:215439/1‑150 (MQ=255) ttttttATTAATGCTTTCGTCGTGGTAAAAACACCCAGTCATGTAATAAAAAAAAGTGATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGcc < 1:2896184/149‑1 (MQ=255) aTTTTTATGACTGCTTTCGTCGTGGTAACCACAACCATCAATGTAATAAATAAAAGAGATGACCTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGcc < 1:1426884/150‑1 (MQ=255) ttttATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCgg > 2:1458258/1‑150 (MQ=255) ttattaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGa < 2:3676576/150‑1 (MQ=255) tattaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGAt > 2:55719/1‑150 (MQ=255) tattaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGAt > 2:1387341/1‑150 (MQ=255) attaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATa > 1:1200754/1‑150 (MQ=255) actgttttGGTCGTGGTAAACAAACCAATTCATGTAATAACTAAAATATATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTg < 1:4366782/145‑1 (MQ=255) aaTGCTTTCGTCGTGGGAAACACACCCCGTCATGTAATAACTAAACGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTg < 2:1719739/150‑1 (MQ=255) aTGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTgg > 1:2996158/1‑150 (MQ=255) cTTTGGGCGTGGTAAACACAACCAGTCTTTTAATAAAAAAAATATATTAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCa < 1:2199919/150‑1 (MQ=255) cgtGGTAAACAAAACCATTATTTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCt < 2:1377438/150‑1 (MQ=255) cgtGGGAAACACAACCATTCATGTAATAAATAAAAGAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCt < 2:3662812/150‑1 (MQ=255) cgtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCt > 2:3653008/1‑150 (MQ=255) tGGGAAACACAACCAGTCATGTAATAACTAAAATAGATTAAATAGACGTTATGTTTTAAATATTCTGCGTCACTTTCAGTCATCTCAAAGGAGATATTGTGGTCGCGGAAGAAACGATGCATATATCCGGGATACTGGCCACGCGCCTGa > 2:2296272/1‑150 (MQ=255) caaaCACAACCAGTCATTTAATAAATAAAAGAGATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACa < 1:2571882/149‑1 (MQ=255) aaCCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaa > 2:3747867/1‑150 (MQ=255) ccAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAg > 1:4208709/1‑150 (MQ=255) gtaatttaataaATAAAAGATATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAAc < 1:1269843/144‑1 (MQ=255) aatttaataaCTAAAATAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACAt < 2:1115235/146‑1 (MQ=255) aTGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATc > 1:3732241/1‑150 (MQ=255) gTAATAAATAAAATATATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCa < 2:226942/150‑1 (MQ=255) aataaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATATCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAgc > 2:779345/1‑150 (MQ=255) aCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCg > 1:779465/1‑150 (MQ=255) cTAAACGAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCgg < 2:2401818/150‑1 (MQ=255) cTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTCTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCgg > 1:3522928/1‑150 (MQ=255) tAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCAGCGTCACTTACAGTCATCTCAATGGTGATATTGTGGTCGCTGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCgga > 2:3300779/1‑149 (MQ=255) aaatttgaTAAAATCGACTGTTTTTTTTAAATATTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGtt < 1:2653381/144‑1 (MQ=255) aaaaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGtt > 2:3237593/1‑150 (MQ=255) aaaaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGtt > 1:1944206/1‑150 (MQ=255) aaaaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGtt > 1:2082394/1‑150 (MQ=255) aaGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTtct < 2:2579821/150‑1 (MQ=255) aaGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTtct > 2:1802288/1‑150 (MQ=255) aaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTtct > 1:1779476/1‑150 (MQ=255) gatattaaaTCGAAGTTATTTTTTAAATCTTCTGCGTCAATTTCAGTCATCTCAATGGTTATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATAACCAAAGAACATCCAGCGCCGGTTctct < 2:4365518/144‑1 (MQ=255) agaTGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCtt > 2:4231539/1‑150 (MQ=255) aTGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTcc > 1:3416717/1‑150 (MQ=255) gAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCAt > 1:3015873/1‑150 (MQ=255) aaaTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATg > 1:2969004/1‑150 (MQ=255) aaaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATg < 1:109471/150‑1 (MQ=255) aaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATgg > 1:1040572/1‑150 (MQ=255) aaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATgg > 2:1847900/1‑150 (MQ=255) cGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCt < 1:4519858/150‑1 (MQ=255) cGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCt > 1:3238904/1‑150 (MQ=255) gACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTg > 1:2107811/1‑150 (MQ=255) aCGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGc > 1:3345465/1‑150 (MQ=255) | CCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896040‑3896338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |