| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,911,514 | G→T | 13.6% | R38S (CGC→AGC) | atpG ← | F1 sector of membrane‑bound ATP synthase, gamma subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,911,514 | 0 | G | T | 13.6% | 1077.2 / 108.9 | 327 | R38S (CGC→AGC) | atpG | F1 sector of membrane‑bound ATP synthase, gamma subunit |
| Reads supporting (aligned to +/- strand): ref base G (127/155); new base T (25/20); total (152/175) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 329 total aligned reads displayed.
AAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCA > CP009273/3911366‑3911663 | aaCCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGAt > 2:821504/1‑150 (MQ=255) aCCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATc < 2:159194/150‑1 (MQ=255) aCCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATc < 2:1251133/150‑1 (MQ=255) ccACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATcc < 1:1070562/150‑1 (MQ=255) ccACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATcc < 2:2844260/150‑1 (MQ=255) ccACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATcc < 1:737401/150‑1 (MQ=255) aCGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATCCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTg < 1:3319681/150‑1 (MQ=255) cgACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACg < 2:2299053/150‑1 (MQ=255) cgACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACg < 2:2158456/150‑1 (MQ=255) cgACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACg > 2:583422/1‑150 (MQ=255) gACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGc > 1:228826/1‑150 (MQ=255) gACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGc > 1:758/1‑150 (MQ=255) caccacCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCAt < 1:492582/150‑1 (MQ=255) accaccAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCACTCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCAtt > 1:1224526/1‑150 (MQ=255) ccaccaGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCAttt < 1:3816032/150‑1 (MQ=255) ccaGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTgg > 2:206732/1‑150 (MQ=255) gTAGCCCACGCGTTTAACGTCTCGGACTTCCAGGTAAGTGTGCTTATATTCCAGATTACCGTGTGCAAGGTGAACAATCACTTTGCGCTTGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAgc > 2:2254153/1‑150 (MQ=255) tAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAgcg > 1:2158511/1‑150 (MQ=255) tAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAGTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAgcg < 2:428736/150‑1 (MQ=255) aGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAgcgg < 1:2772545/150‑1 (MQ=255) aGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAgcgg < 2:2976841/150‑1 (MQ=255) cccACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAgcggcg > 1:867744/1‑150 (MQ=255) cgTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCGTAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAGGCGGCGACCCtc > 2:4294211/1‑150 (MQ=255) cgTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATGTTGGACGCGGCGACCAtc > 2:3570923/1‑150 (MQ=255) cgTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCAtc > 2:511335/1‑150 (MQ=255) cgTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCAtc > 2:2775187/1‑150 (MQ=255) tttAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCAtctc > 2:3992319/1‑150 (MQ=255) ttAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTcc > 1:2001995/1‑150 (MQ=255) tAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCa < 1:4242163/150‑1 (MQ=255) aaCGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCAt > 1:969699/1‑150 (MQ=255) aaCGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCAt < 2:3737330/150‑1 (MQ=255) aCGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTTACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATc < 2:401246/150‑1 (MQ=255) aCGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATc < 2:1977697/150‑1 (MQ=255) gTCGCGCTCTTCCAGGTAAGGGTGCTTATATACCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGc > 2:3180411/1‑150 (MQ=255) tCGCGGTCTTCCAGGTAAGGGTGCTTATAGTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCt < 2:1861903/150‑1 (MQ=255) gcgGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCttt < 2:1625089/150‑1 (MQ=255) cgGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTa < 1:4397821/150‑1 (MQ=255) cgGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTa < 1:2561372/150‑1 (MQ=255) ggTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAg < 1:3733344/150‑1 (MQ=255) ggTCTTACAGGTAAGGGTGCTTATATTAAAGATAACAGTGTGCAAGTGTACCAATCAATTTGCGCATGGTTTCTGCATAAGTACGGCTGGCCGACATGCGATCCTGCGAGTTACGCATTTTGGAATCGGCGACCATCTCCATCTCTTTAg > 2:2936424/1‑150 (MQ=255) gTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGt < 1:2444374/150‑1 (MQ=255) ttCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGAt > 2:255063/1‑150 (MQ=255) ccAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCt < 1:4064318/150‑1 (MQ=255) cAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCtt > 1:610865/1‑150 (MQ=255) cAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCtt < 1:42388/150‑1 (MQ=255) cAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCtt < 1:1355884/150‑1 (MQ=255) aGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCgt > 1:3783567/1‑150 (MQ=255) gggTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCgtg < 1:2054214/150‑1 (MQ=255) tGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTc > 1:765270/1‑150 (MQ=255) tGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTc < 1:758218/150‑1 (MQ=255) tGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTc < 1:1007345/150‑1 (MQ=255) gCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCt > 2:489675/1‑150 (MQ=255) cTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTg > 2:674350/1‑150 (MQ=255) atatTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGAc < 1:896644/150‑1 (MQ=255) tatTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACg < 2:2479880/150‑1 (MQ=255) tCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCtt < 1:1604193/150‑1 (MQ=255) cAGATTACCGTGTGCAAGGTGACCAATCACTTTGCACATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGc < 2:3832906/150‑1 (MQ=255) aGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCg > 1:1956018/1‑150 (MQ=255) ttACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATc < 2:4061557/150‑1 (MQ=255) tACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCt > 1:1764160/1‑150 (MQ=255) cGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTtac > 1:2943053/1‑150 (MQ=255) cGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTtac > 1:1870333/1‑150 (MQ=255) gtgtGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGTCCTCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTtact < 2:871906/150‑1 (MQ=255) gtgtGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATATTTTGCGTGTTCTGGACGCTTGCGATCTtact > 2:3272764/1‑150 (MQ=255) gtgCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTtactac > 2:4109447/1‑150 (MQ=255) cAAGGTGACCACTCACTTTGCGCATGGTTTCTGCCTACGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTa < 2:1150358/150‑1 (MQ=255) aaGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTAt > 1:255408/1‑150 (MQ=255) aCCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCttt < 1:282125/150‑1 (MQ=255) ccAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCtttt < 2:1714010/150‑1 (MQ=255) ccAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCtttt > 2:3927919/1‑150 (MQ=255) cAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTg > 2:3694464/1‑150 (MQ=255) cAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTg < 1:2180976/150‑1 (MQ=255) cAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTg < 2:515091/150‑1 (MQ=255) aaTCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTgc > 1:2800090/1‑150 (MQ=255) aaTCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTgc > 1:2192053/1‑150 (MQ=255) cACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGcc > 2:335056/1‑150 (MQ=255) tGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCa < 1:4012776/150‑1 (MQ=255) tGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCa < 2:3948215/150‑1 (MQ=255) gcgcATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCAt < 2:634598/150‑1 (MQ=255) gcATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGa < 2:10686/150‑1 (MQ=255) aTGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCCTGAGc > 2:852854/1‑150 (MQ=255) gTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTtc > 1:2885403/1‑150 (MQ=255) gTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTtc < 1:545557/150‑1 (MQ=255) gCATAAGGACGGCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCa > 1:3418642/1‑150 (MQ=255) gCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCa < 2:3107531/150‑1 (MQ=255) aTAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAAt > 2:3597631/1‑150 (MQ=255) aGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGcc > 2:4190596/1‑150 (MQ=255) ggACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCt < 2:3075456/150‑1 (MQ=255) gACGGCTGGCCGCCATGCGATCCTGCGATTTTCGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCtt < 1:3670450/150‑1 (MQ=255) aCGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTg < 2:1435021/150‑1 (MQ=255) ggCTGGCCGCCATGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCg > 1:2989999/1‑150 (MQ=255) ggCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCg > 1:1792952/1‑150 (MQ=255) cTGGCCGCCATGCGACCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGc > 1:362034/1‑150 (MQ=255) tGGCCGCCATGCGCTCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGcc < 1:457599/150‑1 (MQ=255) gccATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGccc > 1:2893296/1‑150 (MQ=255) gccATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGccc > 1:318558/1‑150 (MQ=255) gccATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGccc > 2:3202325/1‑150 (MQ=255) aTGCTATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTGAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTaa > 2:2181803/1‑150 (MQ=255) tGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAg > 2:3297471/1‑150 (MQ=255) gATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCa > 2:4533978/1‑150 (MQ=255) | AAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTTCTGCATAAGGACGGCTGGCCGCCATGCGATCCTGCGATTTACGCATTTTGGAAGCGGCGACCATCTCCATCGCTTTAGTGATCTTTTGCGTGTTCTGGACGCTTGCGATCTTACTACGTATCTCTTTTGCGCCGGCCATGAGCTTCTCCTCAATGCCTTGCGGCCTGCCCTAAGGCA > CP009273/3911366‑3911663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |