| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,917,940 | C→A | 11.8% | D352Y (GAC→TAC) | mnmG ← | 5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,917,940 | 0 | C | A | 11.8% | 769.3 / 64.0 | 258 | D352Y (GAC→TAC) | mnmG | 5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| Reads supporting (aligned to +/- strand): ref base C (107/119); new base A (17/15); total (124/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.62e-01 | |||||||||||
Only 100 of 267 total aligned reads displayed.
CCAACCTTCTTTGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCA > CP009273/3917791‑3918089 | ccAACCTTCTTTGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTc > 1:2872736/1‑150 (MQ=255)ccAACCTTCTTTGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTc < 2:3781584/150‑1 (MQ=255) aCCTTCTTTGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTagcg > 2:3577401/1‑150 (MQ=255) tttGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATc < 2:2733149/150‑1 (MQ=255) tttGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATc < 1:408259/150‑1 (MQ=255) ttGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCg < 2:85168/150‑1 (MQ=255) cagcagACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGGTTCAGGTCGCGAGGATCgaaga > 2:2507495/1‑150 (MQ=255) agcagACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCgaagaa < 1:1128890/150‑1 (MQ=255) agcagACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCgaagaa < 2:695585/150‑1 (MQ=255) agcagACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCgaagaa < 2:595343/150‑1 (MQ=255) cagacagaCGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGt > 1:3540727/1‑150 (MQ=255) acagacGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCAt < 1:3595230/150‑1 (MQ=255) gacGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACt < 1:4480983/150‑1 (MQ=255) acGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCACAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTc < 1:993005/150‑1 (MQ=255) cGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCa < 2:1152969/150‑1 (MQ=255) cGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCa < 1:1275717/150‑1 (MQ=255) ggCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAAt > 2:1380447/1‑150 (MQ=255) gCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCa < 1:1403240/150‑1 (MQ=255) cGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGTAGTCATACTAAATGGCAt > 2:4175721/1‑150 (MQ=255) gTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATa > 2:3077214/1‑150 (MQ=255) aaGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAAcc < 2:2995641/150‑1 (MQ=255) aCCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCgg < 1:2468688/150‑1 (MQ=255) ggCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACg > 1:1375438/1‑150 (MQ=255) ggCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACg < 1:4022982/150‑1 (MQ=255) ggCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACg > 2:4271445/1‑150 (MQ=255) aGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGGTTCAGGTCGCGAGGATCGAAGAAGTCATACTCCAAGGCCTAACCCGGACGCACg > 2:3565875/1‑150 (MQ=255) aaaCCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATATGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTAAGGGCGCGAGGGTAGAAGAAATCAAAAAAAATGGCAAAAACCCGACCCACGAta > 1:532949/1‑149 (MQ=255) aCCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCtt < 2:545283/150‑1 (MQ=255) aCCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGGTTAAGGGCGCGAGGATAGAAGAAGTCATACACAAAGGCATAACCCGGACGCACGATAtt > 1:940056/1‑150 (MQ=255) cAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGtttt < 2:573335/150‑1 (MQ=255) aGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTAAATGGCATAAACCGGACGCCCGATCTTCGCGGTTTc > 2:3447261/1‑150 (MQ=255) gCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGGTCGAAGAAGTCAAAATCAATTGCATAACCCGGACGCACGAAATTCGCGTTTTACaaa > 1:4213085/1‑148 (MQ=255) cttcGTAACCGGTAGTGCCATTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATcccca > 1:18984/1‑149 (MQ=255) gTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCAt < 2:975891/150‑1 (MQ=255) tAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAATAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTACAACCCCAGCaaa > 1:490092/1‑148 (MQ=255) tAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATa < 2:2651386/150‑1 (MQ=255) ccGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATagag < 2:4215298/150‑1 (MQ=255) ccGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATagag < 1:4451060/150‑1 (MQ=255) ccGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATagag < 1:1849561/150‑1 (MQ=255) gCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGAt < 2:3330950/150‑1 (MQ=255) gCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGAt < 1:506048/150‑1 (MQ=255) ccGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGAtt < 2:2348131/150‑1 (MQ=255) ccGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGAtt < 1:1533497/150‑1 (MQ=255) ccGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGAtt < 2:83934/150‑1 (MQ=255) tAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGTGGATAGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCAAATAGCGGACGATTTGCa > 1:2648787/1‑150 (MQ=255) aaTCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGTTCGAAGAAGTCATACTCAATGGCATAACCCGGAAGCACGATCTTAGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCAt > 2:1533913/1‑150 (MQ=255) aaTCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCAt > 1:1029526/1‑150 (MQ=255) aaTCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCAt > 2:1464817/1‑150 (MQ=255) cTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTg > 1:3952741/1‑150 (MQ=255) tGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATAATCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGc > 1:1016648/1‑150 (MQ=255) gACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCGTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGca > 1:3336366/1‑150 (MQ=255) aCCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGcac < 1:775108/150‑1 (MQ=255) aCCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGcac < 1:3037255/150‑1 (MQ=255) aCCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGcac > 2:1061835/1‑150 (MQ=255) aCCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGAGTTGCATCTGcac > 1:2080945/1‑150 (MQ=255) ccAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGcaca < 1:3806414/150‑1 (MQ=255) ccAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGcaca < 1:3931435/150‑1 (MQ=255) ccAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGcaca < 2:290954/150‑1 (MQ=255) cAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACAt < 1:2560823/150‑1 (MQ=255) cAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACAt < 1:2561715/150‑1 (MQ=255) cAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTAAGGTCGCGAGGATCGAAGAAGTCATAATCAAAGGCATAACCCGGACGCACGATCTTCGCGTTTTACAAACCCTGCAAACAGAGGACGATTTTCATATGcaaaa > 1:4185121/1‑147 (MQ=255) aGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGAACATc > 2:3289979/1‑150 (MQ=255) cAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGa > 2:44689/1‑150 (MQ=255) cAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGa > 2:2426027/1‑150 (MQ=255) aaaGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGaa > 2:910758/1‑150 (MQ=255) aaaGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGaa > 2:832143/1‑150 (MQ=255) aCAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTACACATCGAACGGCa < 2:4139098/150‑1 (MQ=255) cccTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCtg < 2:805144/150‑1 (MQ=255) ccTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCtgg < 1:968609/150‑1 (MQ=255) cTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCtggt < 1:3167480/150‑1 (MQ=255) ggATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCtggtgg > 2:2815067/1‑150 (MQ=255) ggATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACACCGAACGGCAGGCtggtgg < 1:595973/150‑1 (MQ=255) ggATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTAATACTCAATTGCATAACCCGGACGCACGATATTCGCGTTTTACATCCCCTGCATAGAGCGGACGATTTTCATCTGCACATCGAACGGCAGGCtggtgg > 2:1125/1‑150 (MQ=255) aTAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGgag > 1:1813097/1‑150 (MQ=255) aaaCTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGCTTTGCATCTGCACATCGAACGGCAGGGTGGTGGAGAt > 2:3876986/1‑150 (MQ=255) aaaCTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGAt < 2:3804271/150‑1 (MQ=255) aaaCTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGAt > 2:378965/1‑150 (MQ=255) aaaCTTGCTCTCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGAt < 1:4532096/150‑1 (MQ=255) aaaCTTGCTCTCCAGCGTCGGGTTCAGGTCGCGAGGATCGCAGAAGTCATAATCAATGGCATTACCCGGACGCCCGATCGTCGGGTTTTCCAGCCCCTGCATAGAGCGGCCGCGTTGCATCTGCACATCGTACGGCCGGCTGGGGGCGAt > 1:2458299/1‑150 (MQ=255) aCTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCAAACACAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATAc > 2:2674403/1‑150 (MQ=255) gCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGtt < 2:1325240/150‑1 (MQ=255) ctctCCAGCGTCGGTTTCAGGTAGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTc < 1:3915143/150‑1 (MQ=255) tctcCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCg < 2:2864777/150‑1 (MQ=255) ctcCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAAACCGGACGCACGATCTTAGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCgg > 1:4285533/1‑150 (MQ=255) tcCAGCGTCGGTTTCAGGTCGCGATGATCGAAGAACTAATACTCAAAGGCATAACCCGGACGCAAGATCTTCGAGTTTTCCATCCCCTGCAAAAAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGa > 2:1010443/1‑150 (MQ=255) tcCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATATTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATAGAACGGCAGGCTGGTGGAGATACCGTTCGGa > 2:2925117/1‑150 (MQ=255) ccAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGAt < 1:2184323/150‑1 (MQ=255) ccAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGAt > 2:2950984/1‑150 (MQ=255) cAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCACTGGCATAACCCGGACGCACGATCTTCGCGTTTTCCCTCCCCGGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATa < 2:1633772/150‑1 (MQ=255) cAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATa < 1:61559/150‑1 (MQ=255) gTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAAtt < 2:1373155/150‑1 (MQ=255) tCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAAttt > 2:2016209/1‑150 (MQ=255) cGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTc > 2:4306434/1‑150 (MQ=255) gTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCAt < 1:431472/150‑1 (MQ=255) gTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCAt < 1:2695167/150‑1 (MQ=255) tttCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCAtt < 2:212644/150‑1 (MQ=255) aGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTagag < 2:18984/150‑1 (MQ=255) ggTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTCCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAgg < 1:700929/150‑1 (MQ=255) gTCGCGAGGATCGAAGAAGTCATACTCAATGGCATATCCCGGAAGAACGATCTTCGCGTTTTCCATCACCTTCATAGAGCGGAGGTTTTGCATCTTCACATCGAACGGCAGGCTTGTTGAGATACCGTTCGGATAAATTTCATTAGAGGt < 1:4326535/150‑1 (MQ=255) cgcgAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCa < 1:1721040/150‑1 (MQ=255) | CCAACCTTCTTTGTCAGCAGACAGACGGGCAGCGTTAAGACCGGCCAGCAAACCTTGCGCAGCGGCTTCTTCGTAACCGGTAGTGCCGTTAATCTGACCAGCAAAGAACAGCCCCTGGATAAACTTGCTCTCCAGCGTCGGTTTCAGGTCGCGAGGATCGAAGAAGTCATACTCAATGGCATAACCCGGACGCACGATCTTCGCGTTTTCCATCCCCTGCATAGAGCGGACGATTTGCATCTGCACATCGAACGGCAGGCTGGTGGAGATACCGTTCGGATAAATTTCATTAGAGGTCA > CP009273/3917791‑3918089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |