| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,999,937 | A→T | 6.6% | S238S (TCA→TCT) | recQ → | ATP‑dependent DNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,999,937 | 0 | A | T | 6.6% | 1063.9 / 48.5 | 304 | S238S (TCA→TCT) | recQ | ATP‑dependent DNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (149/135); new base T (13/7); total (162/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 304 total aligned reads displayed.
CAGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAGCGCGATGACCT > CP009273/3999791‑4000083 | cAGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGc > 1:3277246/1‑150 (MQ=255)cAGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGc > 1:4511709/1‑150 (MQ=255) aGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCa > 2:280946/1‑150 (MQ=255) ggATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCAt > 1:943937/1‑150 (MQ=255) tatCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTAt < 2:1387530/150‑1 (MQ=255) atCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATc < 2:1137056/150‑1 (MQ=255) atCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATc > 1:4327815/1‑150 (MQ=255) tCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCt < 2:1197673/150‑1 (MQ=255) cGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTa < 1:56011/150‑1 (MQ=255) gTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTAc < 2:1276204/150‑1 (MQ=255) gTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTAc > 2:1435555/1‑150 (MQ=255) tGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACt < 2:3050656/150‑1 (MQ=255) cgcCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGc > 2:2927843/1‑150 (MQ=255) gcCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCa < 1:100475/150‑1 (MQ=255) ccTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCaa > 1:1751099/1‑150 (MQ=255) ctgGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGc > 1:920320/1‑150 (MQ=255) ggggCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCcg > 2:1774171/1‑150 (MQ=255) cTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCcgcgcg < 1:4070295/150‑1 (MQ=255) cTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCcgcgcg < 1:1261236/150‑1 (MQ=255) aaCGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa > 1:2831170/1‑150 (MQ=255) aaCGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa > 2:871027/1‑150 (MQ=255) cGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt > 2:4024959/1‑150 (MQ=255) aTCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCTGGCATTATCTACTGCAACAGCCGCGCGAAAGTag < 1:1365409/150‑1 (MQ=255) aTCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTag < 1:2162376/150‑1 (MQ=255) tCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTaga < 1:4381515/150‑1 (MQ=255) tCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTaga < 1:1897811/150‑1 (MQ=255) ccGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaa > 1:4433142/1‑150 (MQ=255) cGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:166431/1‑150 (MQ=255) cTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGac > 1:3987819/1‑150 (MQ=255) tGATTCAAATCAGCAGTTTTGACCGTCCGATTATTCGCTACGTGCTGATGGAGAAGTGCAATCCGCTCGATCAGTTGATGCGCTACGTGCTGGAACCGCGCGGTCAGTCAGGCAGTATCTACTGCAACAGCCGCGCGAAGGTCGAAGaca > 2:2228822/1‑150 (MQ=255) tGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGaca > 1:650935/1‑150 (MQ=255) tGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCAGTATCTACTGCAACAGCCGCGCGAAAGTAGAAGaca > 1:1163884/1‑150 (MQ=255) gATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGacac > 1:2307063/1‑150 (MQ=255) gATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGacac > 1:3031679/1‑150 (MQ=255) gATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGacac < 1:2928641/150‑1 (MQ=255) gATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGacac < 1:4154226/150‑1 (MQ=255) aTTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACAcc < 1:2956048/150‑1 (MQ=255) aTTCAAATCAGCAGTTTTGACCGTCCGAATAGTCGCTACATGCTGTTGGAGAAGTTCATACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACAcc < 1:2520692/150‑1 (MQ=255) aaaTCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTACGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGACGACACCGCTg > 2:3246186/1‑150 (MQ=255) aaTCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgc > 2:1534691/1‑150 (MQ=255) aaTCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgc < 1:1562581/150‑1 (MQ=255) cagcagTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:3889809/1‑150 (MQ=255) cagcagTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:2223887/1‑150 (MQ=255) gcagTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGcc < 2:3862621/150‑1 (MQ=255) cagTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:148842/150‑1 (MQ=255) agTTTTGAGCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTg < 2:1998193/150‑1 (MQ=255) gTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGc > 2:186681/1‑150 (MQ=255) tGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAg < 1:3533529/150‑1 (MQ=255) tGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAg > 1:3839366/1‑150 (MQ=255) tGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAg < 2:2558659/150‑1 (MQ=255) gTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAgg > 1:3821071/1‑150 (MQ=255) cGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGaa > 2:2473474/1‑150 (MQ=255) aaTATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAtt > 2:2385039/1‑150 (MQ=255) atatTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa < 2:3307422/150‑1 (MQ=255) atatTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa < 2:627937/150‑1 (MQ=255) atTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCGAAGCAAGGGAATTAgc > 1:57200/1‑150 (MQ=255) cGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGcgcg > 1:4181849/1‑150 (MQ=255) gCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCTGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa < 2:2653263/150‑1 (MQ=255) gCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCTGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa < 2:388367/150‑1 (MQ=255) gCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa > 1:2785091/1‑150 (MQ=255) cTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTAt > 1:516223/1‑150 (MQ=255) gATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCa < 1:4141749/150‑1 (MQ=255) aTGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCAt < 2:4520584/150‑1 (MQ=255) tGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATg > 1:2190320/1‑150 (MQ=255) agaAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCg > 2:170386/1‑150 (MQ=255) aGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGc > 1:715512/1‑150 (MQ=255) gTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCt < 1:3698444/150‑1 (MQ=255) ttCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTg < 2:4225013/150‑1 (MQ=255) ttCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAGTAGCGCGGCGGCCTATCATGCCGGGCTg > 2:343088/1‑150 (MQ=255) cAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGa < 1:850094/150‑1 (MQ=255) cAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGa < 2:2619339/150‑1 (MQ=255) aaaCCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGaa > 1:271335/1‑150 (MQ=255) ccGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAaat > 2:396009/1‑150 (MQ=255) cGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAaata > 1:104645/1‑150 (MQ=255) tCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATg < 2:1751056/150‑1 (MQ=255) gATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCTGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGtt > 1:3198081/1‑150 (MQ=255) gATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCTGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGtt < 1:3435176/150‑1 (MQ=255) gATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGtt > 2:2111215/1‑150 (MQ=255) aTCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTc < 2:3440950/150‑1 (MQ=255) aTCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTc < 1:3595523/150‑1 (MQ=255) aGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTcgcg < 2:3739302/150‑1 (MQ=255) aGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTcgcg < 2:3441468/150‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCg < 1:792110/150‑1 (MQ=255) gATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGa > 1:2401456/1‑150 (MQ=255) cTACGTGCAGGAACAGCGCGGTAAGTCTGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCa < 1:2008289/150‑1 (MQ=255) tACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAg > 2:2967072/1‑150 (MQ=255) cGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAACGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGa < 2:3147872/150‑1 (MQ=255) cGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGa > 1:207965/1‑150 (MQ=255) tGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCACCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGaaa > 2:4475986/1‑150 (MQ=255) aGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAAt < 1:1720246/150‑1 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCa < 2:380584/150‑1 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCa < 1:2760438/150‑1 (MQ=255) aGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAgc > 1:3738361/1‑150 (MQ=255) aGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAgc < 2:833673/150‑1 (MQ=255) gcgcGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAgcg < 1:4187994/150‑1 (MQ=255) cgcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAgcgc > 1:3294431/1‑150 (MQ=255) cgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAGCGCGa > 2:3508952/1‑150 (MQ=255) tAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAGCGCGATGa > 1:3646252/1‑150 (MQ=255) aaGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGACAAATTCCAGCGCGATGAc > 2:4140135/1‑150 (MQ=255) aGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAGCGCGATGAcc > 2:445379/1‑150 (MQ=255) | CAGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAGCGCGATGACCT > CP009273/3999791‑4000083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |