| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,110,209 | G→T | 16.9% | L23L (CTC→CTA) | menA ← | 1,4‑dihydroxy‑2‑naphthoate octaprenyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,110,209 | 0 | G | T | 16.9% | 819.3 / 111.0 | 270 | L23L (CTC→CTA) | menA | 1,4‑dihydroxy‑2‑naphthoate octaprenyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (100/124); new base T (20/26); total (120/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 279 total aligned reads displayed.
CTGCCTTTTACCGCATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATAAAACG > CP009273/4110060‑4110358 | ttACCGCATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGa < 1:1693148/150‑1 (MQ=255) tACCGCATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAg < 1:66184/150‑1 (MQ=255) ccGCATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAggg < 1:1892357/150‑1 (MQ=255) ccGCATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAggg > 2:4373649/1‑150 (MQ=255) cagCATCGACTTAATCATTGGCGAGGTTAGAAAGGATCTTTAATAGCACTGCGGTAATTATTGCCAGCAGGGAGACCATATGATCGAAGTGACCTTGCCAACATTCCAGAGCTGTCCCGAAGATCATTGCATAAAAGAAGAGGGGGAggg > 2:3230303/3‑150 (MQ=255) cATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGttt > 1:1096859/1‑150 (MQ=255) cATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGttt < 1:486385/150‑1 (MQ=255) cATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGttt > 1:3379045/1‑150 (MQ=255) tCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTa > 1:4505846/1‑150 (MQ=255) tCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTa > 2:770773/1‑150 (MQ=255) ccGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGt > 2:616257/1‑150 (MQ=255) ccGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGt < 1:1013642/150‑1 (MQ=255) cttAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTc < 1:1534558/148‑1 (MQ=255) cGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTc < 1:241329/150‑1 (MQ=255) cGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTc < 2:1240922/150‑1 (MQ=255) cGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTc < 2:1241022/150‑1 (MQ=255) cGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTc > 2:3576970/1‑150 (MQ=255) gTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCg > 1:4323750/1‑150 (MQ=255) tAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGt < 1:986781/150‑1 (MQ=255) aaTCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTa > 1:4108222/1‑150 (MQ=255) aTCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTaa > 2:1831827/1‑150 (MQ=255) cATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAAc > 2:3903813/1‑150 (MQ=255) ggCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTc < 2:17106/150‑1 (MQ=255) gAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCAAGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAg > 2:3884241/1‑150 (MQ=255) gTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCa < 1:1453722/150‑1 (MQ=255) ttAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCAc < 2:951664/150‑1 (MQ=255) tAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACg < 1:2196284/150‑1 (MQ=255) aGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGc > 1:237680/1‑150 (MQ=255) aGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATCCTTGCAGCAAAGGCGAGGGGGAGGGGTTTAGGTCGTAAACTTTCCAGCCACGCCTGa > 2:1204851/1‑150 (MQ=255) aGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGa < 1:2889672/150‑1 (MQ=255) aGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGa < 1:3682936/150‑1 (MQ=255) ggATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAg > 1:2075267/1‑150 (MQ=255) ggATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAg < 1:3442160/150‑1 (MQ=255) gATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGGTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGt > 2:2319655/1‑150 (MQ=255) aTCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGtt < 1:3324297/150‑1 (MQ=255) tCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTc < 2:2850623/150‑1 (MQ=255) tGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCgg < 1:4204192/150‑1 (MQ=255) gTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGc < 1:2298137/150‑1 (MQ=255) tAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGGCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCt < 2:2990539/150‑1 (MQ=255) aaTAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTa < 2:3921876/150‑1 (MQ=255) tAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAAt < 2:1565004/150‑1 (MQ=255) tAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAAt < 2:2509737/150‑1 (MQ=255) cccGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATttg < 2:2152845/150‑1 (MQ=255) ggcggTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATttgttg > 1:1445875/1‑150 (MQ=255) cggTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTgttgtt < 1:215966/150‑1 (MQ=255) ggTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTc > 1:404141/1‑150 (MQ=255) tAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAg < 1:1757566/150‑1 (MQ=255) gTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCTAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCataa < 1:487097/150‑1 (MQ=255) tGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCataat < 1:4224469/150‑1 (MQ=255) ccAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATAc < 2:4461815/150‑1 (MQ=255) gcagGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATAcgcg < 1:1878423/150‑1 (MQ=255) agGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGcc > 2:2756409/1‑150 (MQ=255) gggCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCa < 1:3466528/150‑1 (MQ=255) gggCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCa < 1:778786/150‑1 (MQ=255) gCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAAt < 1:4138513/150‑1 (MQ=255) cGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATa < 1:3994412/150‑1 (MQ=255) aCCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATaaa > 1:2786444/1‑150 (MQ=255) gCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTATTTTGTTGTTCAGTCATAATACGCGCCAATAAAAATg < 2:540275/150‑1 (MQ=255) ggATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATggg > 1:557075/1‑150 (MQ=255) gATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATgggg > 2:4086943/1‑150 (MQ=255) gATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATgggg < 2:2002980/150‑1 (MQ=255) aTCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGc < 2:2357140/150‑1 (MQ=255) tCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGcc > 1:3865633/1‑150 (MQ=255) cGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCt > 2:2128242/1‑150 (MQ=255) aGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTc > 1:1331643/1‑150 (MQ=255) cTTACCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGcccc > 1:2242702/1‑150 (MQ=255) gCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATc < 1:4345822/150‑1 (MQ=255) gCCACCATGCCAGCGCTGTCCCGAAGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATc < 1:2069847/150‑1 (MQ=255) caccaTGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCaa < 1:2618042/150‑1 (MQ=255) ccaTGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAAc < 2:1461621/150‑1 (MQ=255) ccaTGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAAc < 2:2304355/150‑1 (MQ=255) caTGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACa < 2:3540907/150‑1 (MQ=255) gCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAatg < 2:3379045/150‑1 (MQ=255) gCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAatg < 2:1096859/150‑1 (MQ=255) ccAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAatga < 1:4458997/150‑1 (MQ=255) ccAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAatga < 1:3253400/150‑1 (MQ=255) gcTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGaaa < 2:1353712/150‑1 (MQ=255) cTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGaaaa < 1:1734547/150‑1 (MQ=255) tGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAAt > 2:3019234/1‑150 (MQ=255) cccGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGAt > 1:1713773/1‑150 (MQ=255) ccGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGAtt < 2:371246/150‑1 (MQ=255) gacgaTAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGa > 1:3639239/1‑150 (MQ=255) cgaTAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGACAATGATTGAAc > 1:1828215/1‑150 (MQ=255) gaTAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAAcg > 1:3137568/1‑150 (MQ=255) tAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAAcgcg > 2:651654/1‑150 (MQ=255) aTTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGAt > 1:471596/1‑150 (MQ=255) ttGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGAtt < 2:2017693/150‑1 (MQ=255) tGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATta < 1:2871226/150‑1 (MQ=255) tGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATta < 2:2464496/150‑1 (MQ=255) agcaAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAg > 2:3508268/1‑150 (MQ=255) agcaAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAg > 2:1421915/1‑150 (MQ=255) gcaAAGGCTAGGGGGAGGGTTTTAGGTCGTAAACTGTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAgg < 1:2393218/150‑1 (MQ=255) caAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGa < 1:123496/150‑1 (MQ=255) aaGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTCTAGGATa > 2:900971/1‑150 (MQ=255) aaGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATa < 1:2088639/150‑1 (MQ=255) aGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATaa > 1:1663850/1‑150 (MQ=255) ggCTAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATaaa > 1:2861189/1‑150 (MQ=255) cGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATAAAAc > 1:3492256/1‑150 (MQ=255) gAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATAAAACg > 1:1991682/1‑150 (MQ=255) gAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTAAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATAAAACg > 2:1030507/1‑150 (MQ=255) | CTGCCTTTTACCGCATCGCCGTAATCATTGGCGAGGTTAGAAAGGATCTGTAATAGCCCGGCGGTAATTAGTGCCAGCAGGGCGACCAGCGGATCGAAGTGACCTTGCCACCATGCCAGCGCTGTCCCGACGATAATTGCAGCAAAGGCGAGGGGGAGGGTTTTAGGTCGTAAACTTTCCAGCCACGCCTGAGTTCGGCTAATTTGTTGTTCAGTCATAATACGCGCCAATAAAAATGGGGCCTTTCAGCCCCATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATAAAACG > CP009273/4110060‑4110358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |