| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,236,535 | T→A | 6.7% | intergenic (‑188/‑177) | malE ← / → malK | maltose transporter subunit/fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,236,535 | 0 | T | A | 6.7% | 716.4 / 4.6 | 217 | intergenic (‑188/‑177) | malE/malK | maltose transporter subunit/fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (80/116); new base A (18/2); total (99/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 218 total aligned reads displayed.
AACGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGAT > CP009273/4236390‑4236684 | aaCGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTTTGATATCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACAAAAAAAAGCCACGAATTTTGCAAGCAACAACACg > 2:364034/1‑150 (MQ=255) ctctAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTc < 1:1515605/150‑1 (MQ=255) ctctAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGTGTTCGCAGGTACAGAAATGGCGGGAAATTGGAGATTCGCACAAAAAAAAGCCACCAATTTTTCAATCAACAACACGAAAATc > 1:1875804/1‑150 (MQ=255) aGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGTTCACTGTTACAGAATTGGCGGTAAATTTGAGATTCCCACATAAAAAAGCCACGATTTTTTCAAAAAACAACACCAAAttacata > 2:4422453/1‑145 (MQ=255) gTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTAc < 1:617473/150‑1 (MQ=255) gTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTAc < 1:616328/150‑1 (MQ=255) tttCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACa < 1:3369627/150‑1 (MQ=255) tttCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGTGTTCTCTGTTACAGAATTTGCGGTAAAGTGGAGATGCGCCCAAAAAAAACCCACCCTTTTTGCACACAACAACAACAAAATCCATACa > 2:3792804/1‑150 (MQ=255) ttCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACAt < 1:1604567/150‑1 (MQ=255) tCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATg < 1:4244738/150‑1 (MQ=255) cTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGa < 2:2504250/150‑1 (MQ=255) ttATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGGTCTCTGTTACAGAAATTGCGGTAATGTGGAGATTCGCACATAAAATCGCCCCGCTTTTTTCACTCAACCACACGAAAATCCGTaaaataac > 2:3566299/1‑143 (MQ=255) aCGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCgg < 1:3336755/150‑1 (MQ=255) cGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTTGCGGTAATGTGGATTTGCGCACAAAAAAAAGCCACGATTTTTTCAACCAACAACACGAAATTACTTACAAGACCTCGGt > 2:1999031/1‑150 (MQ=255) cGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGt < 2:2674067/150‑1 (MQ=255) cGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCACGGTTTCAGAAATTGCGGGAAAGTGGTGATTCGCCCAAAAAAAAGCCACCATTTTTGCAAGCCACCTCACGAAAATACTTACAGGGCCTCGGt > 2:1911033/1‑150 (MQ=255) ggCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGTGATATATGTTTCAGAAATGGCGGTAAATTGGGGATTCGCACAAAAAAAAGCCACCCTTTTTGCAAGCAACAAAACAAAAATACATACAAGACCGCgggt > 1:1067913/1‑148 (MQ=255) gCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGttt < 1:1734877/150‑1 (MQ=255) gCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAAATTGCGGTAATGTGGAGATGCGCACATAAAAAAGCCACGATTTTTTCCAGCAACATCACGAAATTGCTTACATGACCTCGGttt > 2:2476269/1‑150 (MQ=255) gCAACCTCTTTCCATCCTCATTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGttt < 2:2235999/150‑1 (MQ=255) cAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTTTGATATATGTTACAGAAATGGCGGTAATGTGGAGATGCGCACAAAAAATCGCCACGAATTTTTCAAGCAACAACACGAAATTCCATACAAGACCACGGTTTa > 1:2982534/1‑150 (MQ=255) cAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTa < 1:2399113/150‑1 (MQ=255) ccTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGtt < 2:1322480/150‑1 (MQ=255) tctTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTca < 1:113924/150‑1 (MQ=255) ctTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTcac < 1:2412319/150‑1 (MQ=255) tttCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGGGTGATGTCTGTTACAGAATTTGCGGTAATGTGGCGGTGCGCCCCTAAAAAAGCCACGATTTTTTAAAGCAACATCACGAAAATACATACATGACCACGGGTTAGTTcaca > 2:4317025/1‑150 (MQ=255) cATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTTCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAg > 2:1477373/1‑150 (MQ=255) tcctccTTGCCCCTACGCCCCACCGTCGCGTTGGGTGATCTCGGTTACAGAATTGGCGGTAATGGGGCGATGCGCCCCTAAAATCGCCCCGATTTTTGCAAGCACCATCACGCAATTCCGTACATGACCGCGGGTGAGGTCACAGCAGcc > 2:2962673/1‑150 (MQ=255) tcctccGTGCCCCTACGCCCCACCGTCGCTGTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGcc < 2:2884343/150‑1 (MQ=255) gCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTTGCGGTAATGTGGGGATGCGCACAAAAAATAGCCACGATTTTTGCAAGCAACAAAACGAAAATACTTAAATGACCTCGGGTTAGTTCACAGAAGCCGGGTtcta > 2:2881612/1‑149 (MQ=255) gCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTtctc < 2:3487015/150‑1 (MQ=255) cccTACGCCCCACCGTCGCTTTGTGTGTTCACAGTTACAGAAATGGCGGGAATGTGGAGATGCGCACATAAAATCGCCACGAATTTTGCAAGCAACATCACCAAATTCCATACATGACCTCGGTTTAGTTCACAGAAGCCGGGTTCTCAt > 2:4455487/1‑150 (MQ=255) cccTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCAt < 2:4348065/150‑1 (MQ=255) cTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCAtcc < 2:3924231/150‑1 (MQ=255) cTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCAtcc < 2:3923995/150‑1 (MQ=255) cGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCAtcctcc < 2:4058636/150‑1 (MQ=255) gCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTccc < 1:3268261/150‑1 (MQ=255) gCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTccc < 1:2675612/150‑1 (MQ=255) gCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTccc < 1:3652113/150‑1 (MQ=255) cACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGcct < 2:2148669/150‑1 (MQ=255) gTCGCTTTGTTTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCctcctc < 2:1296406/150‑1 (MQ=255) gTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCctcctc > 2:859512/1‑150 (MQ=255) gTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCctcctc > 1:3194554/1‑150 (MQ=255) cGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTccc > 1:391467/1‑150 (MQ=255) cGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTccc > 2:542949/1‑150 (MQ=255) tttGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCa < 2:3226848/150‑1 (MQ=255) tttGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCa < 1:1351793/150‑1 (MQ=255) tttGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCa < 1:296190/150‑1 (MQ=255) gtgtgATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATaa < 2:3643560/150‑1 (MQ=255) tgATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATaaaaa > 2:2607623/1‑150 (MQ=255) gATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAATCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATaaaaaa > 2:3699791/1‑150 (MQ=255) aTCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAg < 2:2320600/150‑1 (MQ=255) ctctGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGcc > 1:329819/1‑150 (MQ=255) ctGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAg < 1:227891/150‑1 (MQ=255) ctGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAg < 1:733561/150‑1 (MQ=255) tGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAgg > 2:1692642/1‑150 (MQ=255) tGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAgg < 2:1381380/150‑1 (MQ=255) ttACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAgggg > 1:1820290/1‑150 (MQ=255) ttACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAgggg > 1:4204163/1‑150 (MQ=255) tACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAggggg < 2:1173363/150‑1 (MQ=255) cAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTg > 2:3764828/1‑150 (MQ=255) cAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTg > 1:752374/1‑150 (MQ=255) cAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTg < 2:4469544/150‑1 (MQ=255) aGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTgg > 1:908670/1‑150 (MQ=255) gAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAg < 2:616552/142‑1 (MQ=255) aaTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTggag < 2:4233115/150‑1 (MQ=255) tGGCGTTAATGTGTAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGTTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAt < 1:2142671/150‑1 (MQ=255) tGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATACAAAAGCCAGGGGGTGGAGGAt < 2:3194554/150‑1 (MQ=255) ggCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAtt < 2:2804256/150‑1 (MQ=255) gCGGTAATGTGTAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTACTCCCCCATAAAAAAGCCAGGGGGTGGAGGAttt < 2:795335/150‑1 (MQ=255) cGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGTCAGGGGGTGGAGGATTTa > 2:4476912/1‑150 (MQ=255) gTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAg > 1:1193065/1‑150 (MQ=255) aaTGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGcc > 1:2443346/1‑150 (MQ=255) ggAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCCGGGGGTGGAGGATTTAAGCCAtctc > 2:3880846/1‑150 (MQ=255) aTGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCtga < 2:2993606/150‑1 (MQ=255) aTGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAAGTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCtga < 2:1272512/150‑1 (MQ=255) aTGCGCAAATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCtga < 1:112132/150‑1 (MQ=255) gcgcACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCtgatg < 2:2358685/150‑1 (MQ=255) gcACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGAc < 2:799049/150‑1 (MQ=255) cacaTAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACg < 2:4125263/150‑1 (MQ=255) aTAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCAt > 1:1129455/1‑150 (MQ=255) aaTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTc < 2:3481469/150‑1 (MQ=255) aaTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTc < 2:708556/150‑1 (MQ=255) aaTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTc > 2:2076273/1‑150 (MQ=255) aTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCa < 1:2572253/150‑1 (MQ=255) aTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCa > 2:1538024/1‑150 (MQ=255) tCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAg < 2:2024236/150‑1 (MQ=255) cGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcatc > 1:3115220/1‑150 (MQ=255) aTTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcatcat < 2:4372454/150‑1 (MQ=255) aTTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcatcat > 1:1751236/1‑150 (MQ=255) aTTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcatcat < 2:3346549/150‑1 (MQ=255) caagcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGtt < 2:4375628/150‑1 (MQ=255) aagcaaCATCACTAATTTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCCCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTg < 1:412891/150‑1 (MQ=255) agcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCACCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGc > 2:188730/1‑150 (MQ=255) caaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTg > 2:1763014/1‑150 (MQ=255) caaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTg > 2:1762756/1‑150 (MQ=255) aCATCACTAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTc < 1:95541/150‑1 (MQ=255) aCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTc < 2:2981680/150‑1 (MQ=255) aCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTc < 2:721355/150‑1 (MQ=255) tCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGAt < 2:3987453/150‑1 (MQ=255) | AACGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGAT > CP009273/4236390‑4236684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |