| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,518,741 | T→A | 5.9% | intergenic (‑7/+6) | sgcQ ← / ← sgcC | putative nucleoside triphosphatase/putative PTS system EIIC permease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,518,741 | 0 | T | A | 5.9% | 948.8 / 37.6 | 270 | intergenic (‑7/+6) | sgcQ/sgcC | putative nucleoside triphosphatase/putative PTS system EIIC permease component |
| Reads supporting (aligned to +/- strand): ref base T (126/128); new base A (9/7); total (135/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 273 total aligned reads displayed.
GCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTG > CP009273/4518592‑4518890 | ccATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTa > 1:1236061/1‑150 (MQ=255) cATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTAc > 1:2134818/1‑150 (MQ=255) tCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTc < 1:4141606/150‑1 (MQ=255) tCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTc > 1:3872987/1‑150 (MQ=255) cAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTcc < 2:3959618/150‑1 (MQ=255) gATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCtt > 1:2290403/1‑150 (MQ=255) gATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCtt > 2:562801/1‑150 (MQ=255) tCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTAt < 2:695987/150‑1 (MQ=255) cGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTAtt < 2:2108970/150‑1 (MQ=255) gTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTc < 1:2100407/150‑1 (MQ=255) cAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGAt < 1:3492105/150‑1 (MQ=255) cAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGAt < 1:1626417/150‑1 (MQ=255) cAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGAt > 2:2293147/1‑150 (MQ=255) aGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATa > 1:685558/1‑150 (MQ=255) ggCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATaa > 1:4157876/1‑150 (MQ=255) gCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCTATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAAt < 2:3290767/150‑1 (MQ=255) cTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAAtt < 1:309620/150‑1 (MQ=255) cTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAAtt < 1:2083177/150‑1 (MQ=255) tttGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTc < 1:407118/150‑1 (MQ=255) tGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGCTGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCAc > 1:3111557/1‑150 (MQ=255) tGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCAc > 1:3111370/1‑150 (MQ=255) gTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACg < 1:2498574/150‑1 (MQ=255) cGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGtt > 1:1121679/1‑150 (MQ=255) gATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGttt < 2:3498573/150‑1 (MQ=255) gATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGttt < 1:747102/150‑1 (MQ=255) aTAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTa > 1:1348668/1‑150 (MQ=255) aTAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTa > 2:1325325/1‑150 (MQ=255) tAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTAc < 2:738495/150‑1 (MQ=255) cATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAg > 2:419934/1‑150 (MQ=255) aTCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGc > 2:2135962/1‑150 (MQ=255) aTCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGc > 1:3975648/1‑150 (MQ=255) tCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTGAGAACAGCa > 2:2805340/1‑150 (MQ=255) ccccAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCac < 2:3043764/150‑1 (MQ=255) cAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCacgac > 1:251708/1‑150 (MQ=255) aaCTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCacgacg > 2:808587/1‑150 (MQ=255) aaCTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCacgacg < 2:2989170/150‑1 (MQ=255) aCTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTCCTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGc > 1:1177271/1‑150 (MQ=255) cgcATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGAAAGAACAGCTCGACGCTGGc > 2:3773023/1‑150 (MQ=255) cATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGa > 2:2491102/1‑150 (MQ=255) cAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACaa > 1:1819214/1‑150 (MQ=255) aaaaCTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAAt > 1:219193/1‑150 (MQ=255) aaaaCTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAAt > 1:758205/1‑150 (MQ=255) aaaCTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATa > 2:1486906/1‑150 (MQ=255) aaCTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATac < 2:3375231/150‑1 (MQ=255) gggTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATaccgacc > 2:2428945/1‑150 (MQ=255) gggTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATaccgacc < 1:2933353/150‑1 (MQ=255) gTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGc < 2:2643830/150‑1 (MQ=255) cGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCa > 2:2950908/1‑150 (MQ=255) gggCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGAc < 1:1548712/150‑1 (MQ=255) ggCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACa > 2:2574881/1‑150 (MQ=255) aaTGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACg < 1:3977432/150‑1 (MQ=255) aaTGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACg > 1:244684/1‑150 (MQ=255) tGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGcc > 1:3695214/1‑150 (MQ=255) tGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGcc < 2:2813532/150‑1 (MQ=255) cACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCaa < 1:1481517/150‑1 (MQ=255) cGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCaata > 2:1687091/1‑150 (MQ=255) cGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCaata < 1:224481/150‑1 (MQ=255) tAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCaataat > 1:4375308/1‑150 (MQ=255) tAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCaataat < 1:1027038/150‑1 (MQ=255) aGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATc > 1:2686350/1‑150 (MQ=255) gATGGCACATGGCGCTGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATcc > 1:274471/1‑150 (MQ=255) acaTGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCg > 1:1302956/1‑150 (MQ=255) tGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACa > 2:4498087/1‑150 (MQ=255) gCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTACGTACGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATc > 2:1138892/1‑150 (MQ=255) cGATGACCGC‑TTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCaa > 1:3956273/1‑150 (MQ=255) ccGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAg < 2:2363069/150‑1 (MQ=255) cTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGaaa < 1:1325325/150‑1 (MQ=255) tttttCCGTCCCAATACCCTCTTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAAt < 2:311550/150‑1 (MQ=255) ttttCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATc < 2:4136521/150‑1 (MQ=255) ttttCCGTCCAAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTTTTCCGATAATTCACTTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATc < 1:2806673/150‑1 (MQ=255) ttCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGa < 2:1113995/150‑1 (MQ=255) cGTCCCAATAACCTCTTTCAGCCAACTCATTGATAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCa < 1:3008528/150‑1 (MQ=255) gTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCaa > 1:4058142/1‑150 (MQ=255) gTCCCAATAACCTCTTTCAGCCAACTAATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACTTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCaa < 2:1678306/150‑1 (MQ=255) tCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAAc < 1:1719604/150‑1 (MQ=255) cccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAAcc > 2:3932047/1‑150 (MQ=255) ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg > 2:1754434/1‑150 (MQ=255) ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg > 1:284641/1‑150 (MQ=255) ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg < 2:3891255/150‑1 (MQ=255) ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg > 1:2977477/1‑150 (MQ=255) ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg > 1:2982540/1‑150 (MQ=255) ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg > 1:4527425/1‑150 (MQ=255) cAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGa > 1:1088439/1‑150 (MQ=255) cAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGa > 2:3366047/1‑150 (MQ=255) tAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACa < 2:3581095/150‑1 (MQ=255) aaCCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACat < 1:1858485/150‑1 (MQ=255) aaCCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACat > 1:2038552/1‑150 (MQ=255) aaCCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACat < 1:3661959/150‑1 (MQ=255) ctTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGc > 1:4449814/1‑150 (MQ=255) ctTTCAGCCAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGc > 2:1535571/1‑150 (MQ=255) ttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGccc < 2:3486316/150‑1 (MQ=255) tCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCa > 1:597579/1‑150 (MQ=255) cAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCAc < 2:1915722/150‑1 (MQ=255) cAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCAc < 2:1089532/150‑1 (MQ=255) cAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGAc < 1:925452/150‑1 (MQ=255) cAACTCATTGAAAGAACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGAc > 2:329679/1‑150 (MQ=255) cAAATCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGAc < 1:3291443/150‑1 (MQ=255) aaCTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACa < 2:429581/150‑1 (MQ=255) tCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACg < 2:1038279/150‑1 (MQ=255) aaGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGAt < 1:835079/150‑1 (MQ=255) | GCCATCAGATCGTCCCAGGCTTTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTG > CP009273/4518592‑4518890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |