| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,554,534 | G→T | 14.4% | A378A (GCC→GCA) | yjiM ← | putative 2‑hydroxyglutaryl‑CoA dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,554,534 | 0 | G | T | 14.4% | 851.4 / 94.7 | 270 | A378A (GCC→GCA) | yjiM | putative 2‑hydroxyglutaryl‑CoA dehydratase |
| Reads supporting (aligned to +/- strand): ref base G (106/125); new base T (25/14); total (131/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.88e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 275 total aligned reads displayed.
GTAATTGCTGTTGCCGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAATCACATC > CP009273/4554385‑4554683 | gTAATTGCTGTTGCCGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAg < 2:789381/150‑1 (MQ=255) aaTTGCTGTTGCCGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGc > 2:1555136/1‑150 (MQ=255) aTTGCTGTTGCCGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGcc < 1:1984702/150‑1 (MQ=255) tGTTGCCGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGac > 2:3012599/1‑150 (MQ=255) tGTTGCCGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGac > 2:3342298/1‑150 (MQ=255) cGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGt > 1:3113112/1‑150 (MQ=255) cGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGt > 2:2050297/1‑150 (MQ=255) ggCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTAc < 2:3832854/150‑1 (MQ=255) cGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTg > 2:1730314/1‑150 (MQ=255) aGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCt < 1:3571356/150‑1 (MQ=255) gggggTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTg > 2:4161969/1‑150 (MQ=255) gggggTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTg > 1:1688118/1‑150 (MQ=255) ggTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGccc < 1:397041/150‑1 (MQ=255) ggTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGccc < 2:2219059/150‑1 (MQ=255) tGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGAc < 1:3381944/150‑1 (MQ=255) tGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGAc > 1:953892/1‑150 (MQ=255) ggAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTg < 1:3474517/143‑1 (MQ=255) ggAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTg > 2:3474517/1‑143 (MQ=255) ggAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTg > 2:1190230/1‑143 (MQ=255) gAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACAt < 2:2691419/150‑1 (MQ=255) cGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCg < 2:3878522/150‑1 (MQ=255) aGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAg < 2:698551/150‑1 (MQ=255) aaCGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTgg < 1:1765868/150‑1 (MQ=255) aaCGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTgg > 1:3242335/1‑150 (MQ=255) tcGGCGCGTAATCACGACGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGa < 1:4258151/149‑1 (MQ=255) aCGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGa < 1:2220967/150‑1 (MQ=255) aCGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGa < 2:597025/150‑1 (MQ=255) gcgTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGagtagt < 1:1824846/150‑1 (MQ=255) gcgTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGagtagt < 1:4102032/150‑1 (MQ=255) gTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCt > 1:1297997/1‑150 (MQ=255) gTAATCACGCCGTCTGCCAGTAAGATCCCTGTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTCCTGAGCTGCCCGACATCCGAGGTGGAGGAGTCt > 1:4220336/1‑150 (MQ=255) tAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTg < 2:2508796/150‑1 (MQ=255) gCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAAt < 1:1042858/150‑1 (MQ=255) gCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAAt < 1:489363/150‑1 (MQ=255) gCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAAt > 1:1002737/1‑150 (MQ=255) ccGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATa < 2:1615912/150‑1 (MQ=255) ccGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATa < 2:3627368/150‑1 (MQ=255) ccGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATa < 1:621086/150‑1 (MQ=255) cGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAg < 1:871910/150‑1 (MQ=255) tGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGat > 2:1903627/1‑150 (MQ=255) gCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGata > 1:71071/1‑150 (MQ=255) ccAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGatat < 2:3052960/150‑1 (MQ=255) aGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATaa > 1:790547/1‑150 (MQ=255) aGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATaa > 1:1373912/1‑150 (MQ=255) gTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAg < 1:2577734/150‑1 (MQ=255) aaGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGa < 1:1342681/150‑1 (MQ=255) gATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAAt > 2:3079578/1‑150 (MQ=255) tCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAAtgt < 2:476664/150‑1 (MQ=255) cTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAAtgttgt < 1:2948657/150‑1 (MQ=255) tggCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTgctgct < 1:2258998/150‑1 (MQ=255) ggCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGctgctg < 2:6119/150‑1 (MQ=255) gCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTgg < 1:1485282/150‑1 (MQ=255) cGGTTGAGCCGGAATCAATGCCAATCGAAGATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGgc < 2:2370504/150‑1 (MQ=255) ggTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGgcg > 2:3500933/1‑150 (MQ=255) aGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACAt < 1:3644269/150‑1 (MQ=255) aGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACAt < 2:2922652/150‑1 (MQ=255) gCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATg < 1:4485249/150‑1 (MQ=255) gCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATg > 2:2306645/1‑150 (MQ=255) ccGGAATCAATGCAAATCGAATATGCCACTGCCACTCCTTACAGCATCTAAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTTTTTCAATAGCGATATAAGGAATGTTTTGCTGCTGGCGCACATGa < 2:4406262/150‑1 (MQ=255) aaTCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGtt > 2:3008218/1‑150 (MQ=255) aaTGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAAt > 2:3064373/1‑150 (MQ=255) gCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGc > 1:2435689/1‑150 (MQ=255) gCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGc > 1:2049699/1‑150 (MQ=255) gCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGc > 1:4323124/1‑150 (MQ=255) ccAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGcc > 1:118471/1‑150 (MQ=255) ccAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGcc > 1:3352210/1‑150 (MQ=255) ccAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGcc < 1:4199483/150‑1 (MQ=255) cAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCa > 2:1665096/1‑150 (MQ=255) cAAGCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCa > 1:2642814/1‑150 (MQ=255) aTCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGc < 2:1810408/150‑1 (MQ=255) gAATATGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGAt < 2:1350185/150‑1 (MQ=255) gAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGAt > 1:3393457/1‑150 (MQ=255) aaTATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGAtt > 1:1531755/1‑150 (MQ=255) aaTATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGAtt > 1:2877648/1‑150 (MQ=255) atGCCACTGCCACTCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCa > 1:4006598/1‑150 (MQ=255) gccactgccactCCTTACAGCATCTCAATAACGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTAAATAGCGATCTACGGAATGTGGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCAcc < 1:440962/150‑1 (MQ=255) actgccactCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACcgcg > 2:3310836/1‑150 (MQ=255) tgccactCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTa > 2:2884943/1‑150 (MQ=255) tgccactCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTa < 2:4519646/150‑1 (MQ=255) cactCCTTACAGCATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGt > 2:2734890/1‑150 (MQ=255) cactCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGt < 2:1613391/150‑1 (MQ=255) actCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTa < 1:1938545/150‑1 (MQ=255) ctCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTAt > 1:2741832/1‑150 (MQ=255) ctCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTAt < 2:1004534/150‑1 (MQ=255) tCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATg > 2:1484006/1‑150 (MQ=255) aCAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACg > 1:3779327/1‑150 (MQ=255) aCAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACg < 1:4264990/150‑1 (MQ=255) aGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGcc > 1:4048439/1‑150 (MQ=255) gCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCt < 2:3681909/150‑1 (MQ=255) gCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCt < 1:4322964/150‑1 (MQ=255) cATCTCAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTg > 2:4084341/1‑150 (MQ=255) tctcAATAAATGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCa < 1:371925/150‑1 (MQ=255) ctcAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCaa > 1:342816/1‑150 (MQ=255) cAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCaaaa > 2:4238535/1‑150 (MQ=255) aaTAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAAt > 2:2533245/1‑150 (MQ=255) aTAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAATc < 2:3123751/150‑1 (MQ=255) aTAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAATc > 1:905585/1‑150 (MQ=255) aTAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAATc > 1:2303545/1‑150 (MQ=255) aaaGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAATcac > 1:2507459/1‑150 (MQ=255) ggCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAATCACATc < 1:1559340/150‑1 (MQ=255) | GTAATTGCTGTTGCCGGGCGAAAGGGGGTTGGAACGAGGAAACGGCGCGTAATCACGCCGTCTGCCAGTAAGATCCCTTTGGTGGCGGTTGAGCCGGAATCAATGCCAATCGAATATGCCACTGCCACTCCTTACAGCATCTCAATAAAGGCCGCGACACGGGTACTGAGCTGCCCGACATCCGAGGTGGAGTAGTCTGTTTCAATAGCGATATAAGGAATGTTGTGCTGCTGGCGCACATGACGTTTAATCGCCAGCGATTCCACCGCGTAGGTATGGCACGCCTGCAAAATCACATC > CP009273/4554385‑4554683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |