| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,469 | G→C | 5.8% | F87L (TTC→TTG) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,469 | 0 | G | C | 5.8% | 786.2 / 3.8 | 237 | F87L (TTC→TTG) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base G (97/119); new base C (16/2); total (114/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.25e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 241 total aligned reads displayed.
AGCAACGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTT > CP009273/1118323‑1118617 | aGCAACGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGaa > 1:255990/1‑149 (MQ=255)aGCAACGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCGTTATGACTAACGaa > 2:4783143/1‑149 (MQ=255) gCAACGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAAc < 2:3397705/149‑1 (MQ=255) gCAACGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATATCTTTCAGGAAGATAGAACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATTGTCGATTTATGACTACAGAAc > 2:4350676/1‑149 (MQ=255) aaCGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAg < 1:5185192/149‑1 (MQ=255) aaCGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAg < 1:2526064/149‑1 (MQ=255) tttGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAg > 2:3458708/1‑149 (MQ=255) tttGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAg > 2:2121394/1‑149 (MQ=255) gCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTTACAACCCAAAACGGAGtta > 1:914400/1‑148 (MQ=255) aTCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTAACCAAAACGGAGTTCAt > 1:2236202/1‑149 (MQ=255) aTCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTGTATCAAACACGGGCAGCGCTTTCAGCGTCAGTTTCATGGTCGCTTTCTGACTACCGCACAGGGAGTGCag > 2:3149922/1‑148 (MQ=255) tCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATg < 1:811407/149‑1 (MQ=255) cGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGAATACACAACAAGGAGTTAATGTcaa > 1:3101257/1‑147 (MQ=255) gTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTTACTACCGAACAGGGAGTTCATGTCCAg > 1:2023872/1‑149 (MQ=255) gTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAg > 1:434384/1‑149 (MQ=255) tttGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGa > 2:4579679/1‑149 (MQ=255) tttGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGa > 1:4742580/1‑149 (MQ=255) tGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGAtt < 1:1887167/149‑1 (MQ=255) tGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGAtt > 2:787802/1‑149 (MQ=255) gCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTg < 1:2294230/149‑1 (MQ=255) gCATTTTGTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTg < 1:2900107/149‑1 (MQ=255) cATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTgg < 1:4976329/149‑1 (MQ=255) aTTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGAATAACCAACAAGGAGTTCATGTCCAGATTGGc > 1:508180/1‑149 (MQ=255) tttCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGtct < 2:2287632/149‑1 (MQ=255) tttCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGtct < 1:1875612/149‑1 (MQ=255) ttCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGtctc < 1:4993023/149‑1 (MQ=255) ttCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGtctc > 2:2879502/1‑149 (MQ=255) tCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTcc < 1:2961742/149‑1 (MQ=255) ccGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCg < 1:2079366/149‑1 (MQ=255) ccGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCg < 1:4689650/149‑1 (MQ=255) gTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGtt < 1:1606843/149‑1 (MQ=255) gTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAgg < 1:3285796/149‑1 (MQ=255) aCCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGt > 2:1758412/1‑149 (MQ=255) ccGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTa < 2:1841329/149‑1 (MQ=255) ccGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGAGTTCAAGTCCAGATTGTCGTCTCCGGTTAGGGTa > 1:1086874/1‑149 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGATTTCATGTCCAGATTGGCGTCTCCCGTTAGGGTaaa > 2:4524553/1‑148 (MQ=255) gCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt > 2:3777136/1‑149 (MQ=255) cATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTGTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTa < 2:5045638/149‑1 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTAACCAAAACGGAGTTAATTTCCACATTGGCGTCTCCGGTTATGGTTACCatat > 1:4398870/1‑149 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt > 1:430589/1‑149 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt < 1:1168056/149‑1 (MQ=255) cGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTc < 2:1735415/149‑1 (MQ=255) gACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCg < 1:1717422/149‑1 (MQ=255) aCCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCgg > 2:3643942/1‑149 (MQ=255) cACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACCAACACGGAGGTCAATTACAGATTTGCGTCACCGGTTAGGGTAACCAAATTAGGct > 1:4031882/1‑149 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt > 2:2332422/1‑149 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTATGGTAACCTTATTCGGCTCtt > 2:3815960/1‑149 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt < 2:1698092/149‑1 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGGTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCtt > 1:2400882/1‑149 (MQ=255) tttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCaa < 2:2803352/149‑1 (MQ=255) tttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCaa > 2:2027937/1‑149 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGTCTACCGAACAGGGAGTTAAAGTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTAGGCTCGTCGCGACCAAatt > 1:2135831/1‑149 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAttt < 1:3766618/149‑1 (MQ=255) ggAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACAAAACAACAGGGAGGTAATTTACAGATTTGCGTATACGGTTAGGGTAAAAATATTAGGGACTTAACCACCAAttttt > 1:4184899/1‑147 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 1:4445845/149‑1 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 1:3225911/149‑1 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGc < 1:635143/149‑1 (MQ=255) aGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTg > 2:3806810/1‑149 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGt < 2:4744115/149‑1 (MQ=255) gCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAg < 2:3062259/149‑1 (MQ=255) ccTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCTGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGtt < 2:3639038/149‑1 (MQ=255) ccTGTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGtt < 2:5162556/149‑1 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGttt < 2:2351029/149‑1 (MQ=255) ttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCa < 2:4674923/149‑1 (MQ=255) ttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCa < 2:587749/149‑1 (MQ=255) tCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGTATACCGAACACGGAGTTCAATTCCAGATTTGCGTCGCCGGGTAGGGTAAACTTATTAGGCTCTTCGCGACCAAATTTGCTGGGCAGGTTTGTCAg > 1:976297/1‑149 (MQ=255) tATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAAAAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACa > 2:1463227/1‑149 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCTCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACaa > 2:1569607/1‑149 (MQ=255) tCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCTTGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAATTTTGCTGGTCAGGTTTTTCAGAACAat > 2:1328314/1‑149 (MQ=255) tCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAat < 2:2073491/149‑1 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCAAGTCCAGATTGGCGTCTCCGGTTAGGGTAAACATATTCGGCTCTTCGCGACCAAATTGGCTGGTCAGGTTTGTCAGAACaaaa > 1:400421/1‑147 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGCACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAAATTGGCTGGGCAGGTTTGTCAGAACAata > 2:1384137/1‑149 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGc < 1:5044740/149‑1 (MQ=255) gggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGt < 1:1313347/149‑1 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGcc > 2:1876830/1‑149 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc < 1:3272887/149‑1 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc < 1:4816618/149‑1 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCAGACTAACGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCCGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATTTGCTGGTCAGGTTTGTCAGAAAAAAATGGGCGTCAGCCACGc > 2:3271960/1‑149 (MQ=255) tCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTAATTTACAGATTTGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAAAATGGGCGTCAGCCCCGccc > 2:500882/1‑148 (MQ=255) gCTTCAGTTTCATGGTCGCTTTCTTAATAACCAACACGGCGTTCATGTCCCGATTTGCGTCACCCGTTAGGGTAACCAGATTAGGCTCGTAGCGACCCAATTTGCTGGTCAGGTTTGTCAGAACAATAAGGGCGGCACCCACCCCcggg > 2:881683/1‑148 (MQ=255) cTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGATTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCAGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTa < 2:4093461/149‑1 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTAAGAACAATATGGGCGTCAGCCACGCCGGGTAAAcc > 2:2589202/1‑149 (MQ=255) gTTTCATGGTCGCTTTCTGACTACCGAACAGGGATTTCTTGTCCAGATGGGCGTCTCCGGTTTGGGTAACCTTTTTCGGCTCTTCGCGACCATTTTGGCTGGTCAGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCg < 2:4053956/149‑1 (MQ=255) tttCATGGTCGCTTTGTGACTACCGAACAGGGAGTTCCTGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGCCCAATTTGGCTGGTCAGGTTTGTCAGTACAATATTGGCGTCAGCCACGCCGGGTAAACCGa > 2:4155596/1‑149 (MQ=255) ggTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt > 2:4910022/1‑149 (MQ=255) cGCTTTCTTACTACCGAACTGGGTGTTCATGTCCAGTTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTGTTCGCGACAATTTTGGCTGGTCTGTTTTGTCAGAACAATTTGGGCGACAGCCACGCCGGGTAAACCGATATCTTTTg < 2:916655/149‑1 (MQ=255) gCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTga < 2:2928889/149‑1 (MQ=255) gCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTga < 2:2437852/149‑1 (MQ=255) cTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTgag > 1:2862480/1‑149 (MQ=255) cTTTATTACTACCCAACAGGTTGATCATGTCCAGATTGGCGAATCCGTTTTGGGTAACCTTATTCGGATCTAGGCGACCAATTTGTCTGGTCTGGTTTTTCATAACAATATGGGCGTCACCCACGCCGGGTAAACCGATATCTTTTgag < 2:258117/149‑1 (MQ=255) atttCTGACTACCGAACTGGGATTTCATGTCCAGATGGGCGTCGCGGGTTTGGTTAACCTTTTTCGGCTCTCCGCGACAATTTTGGGTGGTCTGGTTTTTCATAACAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTgag < 1:3639626/148‑1 (MQ=255) tgccTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGTTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGACATAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt < 2:493886/146‑1 (MQ=255) tGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACGTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCAGGTTTGTCAGAACAATAGGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt < 2:4949065/149‑1 (MQ=255) tGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt > 2:3319589/1‑149 (MQ=255) gACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta > 2:4246870/1‑149 (MQ=255) tACCGAACAGGGTTTTCATGTCCAGATTGGCGTCTCTGGTTAGGTTAACCTTATTCGGCTCTTCGCGACCATTTTGTCTGTTCAGTTTTTTCTTAACATTTTGTGCGTCTGCCACGCCGGGTAAACCGATATCTTTTGAGAAAttatta < 2:4630030/149‑1 (MQ=255) aCCGAACTGGGAGTTCATGTCCAGATGGGCGTCTCCGGTTAGGGTAACCTTTTTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATtattat < 2:3259726/149‑1 (MQ=255) aCCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATtattat > 1:354741/1‑149 (MQ=255) gAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGtt > 2:2494035/1‑149 (MQ=255) gAACAGGGAGTTCATGTCCAGATGGGCGTCTCCGGTTAGTGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCTTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGtt < 2:1066801/149‑1 (MQ=255) | AGCAACGTTTGCATCACCGTTTGCATTTTTTCCGGTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTT > CP009273/1118323‑1118617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |