| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,670,108 | A→C | 6.7% | V170V (GTT→GTG) | pntB ← | pyridine nucleotide transhydrogenase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,670,108 | 0 | A | C | 6.7% | 784.9 / 8.9 | 274 | V170V (GTT→GTG) | pntB | pyridine nucleotide transhydrogenase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base A (139/109); new base C (2/24); total (141/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 304 total aligned reads displayed.
TCGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGT > CP009273/1669960‑1670256 | tCGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAggaaggaa < 2:4242038/149‑1 (MQ=255)tCGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAggaaggaa < 2:1627133/149‑1 (MQ=255) cGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGaaa < 1:241584/149‑1 (MQ=255) gACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAAc > 1:4611873/1‑149 (MQ=255) acacCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACg > 1:4996921/1‑149 (MQ=255) acacCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCATGCGAACAAATACAATCAGCAGCAGGAAGGAAACg > 1:1356901/1‑149 (MQ=255) ccaccacTGGCATATCTGCACCACCGTTGGAGGCGAATAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGATGTAAACGAcc < 2:13486/149‑1 (MQ=255) ccaccacTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGAcc > 2:4739247/1‑149 (MQ=255) accacTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCag > 1:1551197/1‑149 (MQ=255) cacTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCagag > 1:4125080/1‑149 (MQ=255) acTGGCATATCTGCACCACCGATGTAGGCGACTAAATGCCAGCCTAATACCAGCGAAATTGCGGTAATTTTCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCTAACAAATACAATCAGCAGCAGGAAGTAAACGACCAGAgc < 2:2812798/149‑1 (MQ=255) cTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAgcc > 1:4528562/1‑149 (MQ=255) gCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAgccgcc > 2:3805152/1‑149 (MQ=255) tatCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAgg > 1:2428873/1‑149 (MQ=255) tGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCa > 2:3874887/1‑149 (MQ=255) accaccGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCAttt > 1:2915783/1‑149 (MQ=255) accaccGAGGGCGGCGACTAAATGCCAGCCGAATCCCAGCGCAATTGCGGACATTATCAGCAATGCCAGCACTTGCTGGCCGCCGCTGTCCGGGCGAACAAATACAATCACCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCAttt < 2:4969167/149‑1 (MQ=255) ccaccGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCAtttt > 2:4811392/1‑149 (MQ=255) caccGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTtg > 2:786249/1‑149 (MQ=255) caccGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTtg > 2:2451959/1‑149 (MQ=255) caccGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTtg > 1:443469/1‑149 (MQ=255) aTGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACg > 1:603613/1‑149 (MQ=255) ggAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGt > 1:820992/1‑149 (MQ=255) ggAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCGGTCCGTGCTAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGt < 2:2513536/149‑1 (MQ=255) gAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGtt > 1:3189608/1‑149 (MQ=255) gAGGCGAATAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGGGCGAACAAATACAATCCGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGtt < 2:2028882/149‑1 (MQ=255) aGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCCGGTTCATTTTGTGACGGttt > 2:1874321/1‑149 (MQ=255) aGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGttt > 1:4351460/1‑149 (MQ=255) aaaTGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATCCAATCCGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCAt < 2:870730/149‑1 (MQ=255) aaaTGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCAt > 2:4882146/1‑149 (MQ=255) aaaTGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCAt > 2:1750962/1‑149 (MQ=255) aaTGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATc > 2:4500611/1‑149 (MQ=255) gCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAAt > 2:832485/1‑149 (MQ=255) gCCAGCCGAATACCAGCCAAATTGCGGACATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCTAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAAt < 1:3856578/149‑1 (MQ=255) cAGCCTAATACCAGCGAATTTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCACCAGCAGGACGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATgg < 1:2129258/149‑1 (MQ=255) cAGCCGAATACCAGCGCAATTGGGGTCATTATCAGCAATGCCAGCCCGTGCAGGCCGACGCTGTCCGTGCGAACAACTACAAGCAGCCGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATgg < 2:3517925/149‑1 (MQ=255) tgCCTAATACCAGCGCATTTGGGTTATTTATCAGAATTGCAAGCAGTGGCAGGCGGCCGCTGTCCGTGCGAAAAAATACACTCCGCTGCTGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGt < 1:1553830/148‑1 (MQ=255) gCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGtt > 2:4550166/1‑149 (MQ=255) gAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAg > 1:3067755/1‑149 (MQ=255) aaaaCCAGCGAATTGGCGGTAATTAACAGCAATGCCAGCAGTGGCAGGCCGACGCTGTCCTGGCAAACAAATACAAACCCCACCAGTAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGa < 1:493946/146‑1 (MQ=255) aTACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGAc > 1:4058586/1‑149 (MQ=255) aTACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGAc > 1:5158171/1‑149 (MQ=255) aTACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGAc > 1:1443070/1‑149 (MQ=255) tACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACg > 2:4919535/1‑149 (MQ=255) ccAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGaa > 2:1052114/1‑149 (MQ=255) ccAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGaa > 2:2400912/1‑149 (MQ=255) ccAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGaa > 2:1775720/1‑149 (MQ=255) ccAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGaa < 2:1125438/149‑1 (MQ=255) aGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAAt < 2:3418492/149‑1 (MQ=255) aGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATAAAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAAt < 2:2533976/149‑1 (MQ=255) gcgcAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATc > 1:3824869/1‑149 (MQ=255) aTTGCGGTCTTTATCAGCATTGCCAGCACTTGCAGGCCGCCGCTGTCCGTGCGAACAAATACAATCCGCCGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGcc < 1:4140295/149‑1 (MQ=255) aTTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGGGCTAACAAATACAATCAGCAGCAGGAAGCAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGcc < 2:2681910/149‑1 (MQ=255) ttGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCca > 1:3416240/1‑149 (MQ=255) ttGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCca > 2:929290/1‑149 (MQ=255) tGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCcac > 1:1030058/1‑149 (MQ=255) ggTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCcacaca > 1:2525148/1‑149 (MQ=255) gTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAg > 1:1235884/1‑149 (MQ=255) gTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAg > 1:436763/1‑149 (MQ=255) tCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAACTCTTGCCACACAGt > 2:3731709/1‑149 (MQ=255) aTTATCCGCACTGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGCAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGttt < 2:4077494/149‑1 (MQ=255) tATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCTAACAAATACAATCCGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGc < 1:838288/149‑1 (MQ=255) aGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCTGTAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCcaccac < 2:575727/149‑1 (MQ=255) gCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCaccacc > 2:3449471/1‑149 (MQ=255) gctggCCGCCGCTGTCCGTGCTAACAAATACAACCCGAAGCTGTATGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAAccc < 1:992900/146‑1 (MQ=255) ggCCGCCGCTGTCCGTGCCAAAAAAAACAACCCGCCGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTg < 1:3506808/149‑1 (MQ=255) gCCGACGCTGTCCGTGCTAACAAATAAAATCAGCAGAAGTAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGa < 2:2279976/149‑1 (MQ=255) ccGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGaa < 1:2266827/149‑1 (MQ=255) ccGACGCTGTCCGTGCGAAAAAATAAAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGaa < 1:797785/149‑1 (MQ=255) aCGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGt > 2:216095/1‑149 (MQ=255) cGCTGTCCGTGCGAACAAATACAATCAGCAGCAGTAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGtt < 2:1492877/149‑1 (MQ=255) tGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCCGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACCCAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTAcc > 2:2390512/1‑149 (MQ=255) tGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTAcc > 2:2330674/1‑149 (MQ=255) tGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGAGAACGTTAcc > 2:4999673/1‑149 (MQ=255) gTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCAACAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCg > 2:1389716/1‑149 (MQ=255) tCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGACACACAGTTTGCCGAACGCCACCACCGAACCCGAGAACGTCACAGc > 2:964540/1‑149 (MQ=255) cGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAGCGTTACCGccc < 1:662593/149‑1 (MQ=255) cGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGccc > 2:672429/1‑149 (MQ=255) gCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGa < 2:3306148/149‑1 (MQ=255) gCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGa > 2:3017433/1‑149 (MQ=255) aaaaaTACAATCAGCCGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGaa < 1:3633641/147‑1 (MQ=255) aCAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGaa < 2:5047765/149‑1 (MQ=255) aaaaaACAACCAGCAGCAGTAAGTAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAg < 1:1325952/148‑1 (MQ=255) aaaTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGa < 1:4734079/149‑1 (MQ=255) aCAATCAGCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATAcc < 1:408887/149‑1 (MQ=255) cAATCTGCAGCTGGATGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGTACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCg < 1:3772410/149‑1 (MQ=255) agcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAacac > 2:2786472/1‑149 (MQ=255) gcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACt < 2:3144238/149‑1 (MQ=255) gcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACt < 2:2916652/149‑1 (MQ=255) agtaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTc < 1:1131940/146‑1 (MQ=255) aggaaggaCACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTc < 1:3452825/149‑1 (MQ=255) aggaaggaAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTc < 2:5131208/149‑1 (MQ=255) aggaaggaAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTc > 1:3092782/1‑149 (MQ=255) gtaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc < 2:3608340/147‑1 (MQ=255) ggaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc > 2:3386280/1‑149 (MQ=255) gaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCg > 2:4436856/1‑149 (MQ=255) agtaaaCGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTc < 1:1981114/146‑1 (MQ=255) ggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCa > 2:1166695/1‑149 (MQ=255) gaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAg < 2:3224007/149‑1 (MQ=255) aaCGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGt < 2:4351460/149‑1 (MQ=255) | TCGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGT > CP009273/1669960‑1670256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |