| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,708 | G→T | 7.3% | intergenic (‑25/+283) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,708 | 0 | G | T | 7.3% | 779.7 / 8.3 | 265 | intergenic (‑25/+283) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (95/137); new base T (10/23); total (105/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 273 total aligned reads displayed.
CAGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGG > CP009273/2170561‑2170856 | aGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAG‑At > 2:1080632/1‑149 (MQ=255) ggTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑Att < 2:2873281/149‑1 (MQ=255) gTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑Attt < 2:3839491/149‑1 (MQ=255) gTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑Attt < 2:3839471/149‑1 (MQ=255) ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTc < 2:3452914/149‑1 (MQ=255) ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTc < 1:1846058/149‑1 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCaaa < 2:736780/149‑1 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCaaa < 2:4520073/149‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCaaaa < 1:2644536/149‑1 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAat < 2:2944795/149‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATaa < 2:1687570/149‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCG‑ATTTCAAAATATaa > 2:3785766/1‑149 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTGG‑GTTTTAAAAAATaa > 1:3653608/1‑149 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAAt < 2:3731901/149‑1 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAAt < 1:4439728/149‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATg < 2:1044139/149‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATg < 2:888112/149‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGa < 2:4355707/149‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGa < 2:1203286/149‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGa < 2:4888367/149‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGaa < 2:3323187/149‑1 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGaaa < 2:3595155/149‑1 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGaaa < 1:4354402/149‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAat < 1:2682991/149‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAat < 1:996127/149‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTG‑ATTTAAAAAAATAATTAAat‑t > 2:1752002/1‑149 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAG‑ATTTCAAAATATAAAGAAat‑t > 2:2441754/1‑149 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAG‑ATTTAAAAAAATAATTAAat‑t > 2:1751983/1‑149 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTAAAAATATAAATAAat‑ta > 2:1590495/1‑149 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAat‑tat < 1:2070442/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAG‑AGTTATAAATAAAATTAAAT‑TAttt > 1:1133376/1‑149 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTg < 2:4244178/149‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAT‑ATATCAAAAAAAAAAGAAAA‑TAATTGt > 1:1106821/1‑149 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGtt < 1:847957/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGtt < 1:3427900/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGtt < 1:4914010/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGtt < 1:4143721/149‑1 (MQ=255) tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGttt < 1:2975494/149‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGtttt < 2:584740/149‑1 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGttttt < 1:803564/149‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTa < 1:3890370/149‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAG‑ATTTAAAAAAAAAATTAAAA‑TATTTTTTTTTAAat > 2:3100251/1‑149 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAata < 2:1084320/149‑1 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAatat < 1:4969529/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATc < 1:687146/149‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAAAATAATTAAAA‑TATTTTTTTTTatatata > 2:3726102/1‑148 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCga < 1:1653360/149‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCga < 2:2713705/149‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAG‑AATTCAAAATATAAATAAAA‑TATTTTTTTTTTAatatagtg > 2:1451094/1‑145 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAG‑ATTTAAAAAAAAAAATAAAA‑TATTTTTTTTTTAATATAgaa > 2:1369561/1‑148 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCgaga < 2:41658/149‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCgaga < 2:41565/149‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCgaga < 1:2640763/149‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAG‑AATTCAAAAAATAATTAAAT‑TATTTGTTTTTAAATTTAgaga > 2:2061183/1‑149 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTTAAAAAAAAAAATAAATATATTTTTTTTTatatataaa > 1:3062224/1‑146 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTG‑TTTTTAAAAAATAAAAAAAA‑TATTATTTTTTTAatataaatt > 1:469841/1‑144 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCT‑ATTTCAAAATATAATGAAAT‑TATTTTTTTTTAAATATAgaga > 2:718625/1‑149 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGTAAT‑TATTTGTTTTTTAATATAGAGATa > 2:5126416/1‑149 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATa < 2:3569042/149‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGTGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGa < 2:4681810/149‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATc < 2:3623930/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATcac < 1:1852101/149‑1 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCG‑ATTTCAAAATATAATTAAAT‑TATTTGTTTTTAAATATAGAGATAACGATCACaaa > 2:2083065/1‑149 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:3812307/149‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATTAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:2974723/149‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGGTTTAG‑ATTTCAAAATATAATGAAAA‑TATTTTTTTTTAAATATCGAGATAAAGATAACAAAAACGACa > 2:3007551/1‑149 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCG‑ATTTGAAAATATAATGAAAT‑TATTTTTTTTTTAATATCGAGATTACGATCACAAAAAAGACaa > 2:4877597/1‑149 (MQ=255) aCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAAAATAAATAAAT‑TATTTTTTTTTTAATATACAGAGAACGATCACAAAAAcaaaaaaa > 2:4079703/1‑142 (MQ=255) cccATACCCGCCGCGCTGTGCGTTTTTCCGCATCTGCTTTGTCGATACCCCGTACATTTTCATATCCTGTCTTTTGTTTTCT‑ATTAAAAAATATAATGAATT‑TTTTTTTTTTTAAATATCTATATAACTATCACAAACACGACAATATg < 2:3991136/147‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTG‑ATTTGAAAATAAAAAGAAAA‑TATTTTTTTTTTAATATAGAGATAAAGATAAACAAAACGACAAAATGa > 1:1202034/1‑149 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGATTTTTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATTAAAT‑TATTTGTTTTTAAATTTCGAGATAACTATCACAAAAACGACAATATGaaaa < 2:3368001/149‑1 (MQ=255) ccgccgCGCTGTGCTTTGTACAGCATCTGCTTTGTCGATACCCCGTACATTTTCATATCCTGTCGTTTGTTTTCG‑TTTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGAACACAAAAACGACAATATGAAAatta < 2:407553/149‑1 (MQ=255) gcgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTT‑TTTTTAAAAAAAAAATAAAT‑TATTTTTTTTTTAAAATATATATAAAAAAAACAAAAAACACAAAAATAAAAATATTGga > 1:4889219/1‑149 (MQ=255) gcTGTGCGTTGTTCCGCATCTGCTTTGTCGATACCCCGAACATTTTCATATCCTTTCGTTTGTTTTCG‑ATTAAAAAATATAATTAAAT‑TATTTTTTTTTAAATATCGAGATACCGAACACAAACACGACAATATGAAAATTATTCgagg < 1:2508777/149‑1 (MQ=255) gCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGa < 2:1843827/149‑1 (MQ=255) gttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAG‑AATTAAAAAAATAAAGAAAT‑TATTTTTTTTTAAATATAGAGATAACGATAAAAAAAACGAAAAAATTAAAATTATTAGAGGAGTGaaa > 2:2857427/1‑149 (MQ=255) tttaccgCATCGGCTTTGGCGACACCACGTACATTTACATATCCTGTCGTTTGTTTCCT‑ATTACAAAATATAATGAAAT‑TATTTGTTTTAAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 2:4460283/143‑1 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCG‑ATTTCAAAAAAAAAAGAAAA‑TATATTTTTTTAAAAATAGAGATAACCATCACAAAAAACACAAAAAGAAAAAAAATAGAGGAGTGAAAAGCa > 1:5154687/1‑149 (MQ=255) aTCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGTTTTTTTTCG‑ATTTCAAAATATAATTAAAT‑TATTTTTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaaa < 2:202002/149‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGT‑TTTTAAAAAAATAATTAAAA‑TTTTTTTTTTTTAATATAGGGATTAACAACACAAAAACCACAAAAATTAAATTAATAGAGGAGTGTAAGGGcaaaaaa > 2:3492374/1‑149 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTAATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATTAAAT‑TATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaaaaa < 2:2792899/149‑1 (MQ=255) aaaCCACTAACATTTACATATCCGGGCTTTTGTTTCCT‑ATTACAAAAAATAATCAAAT‑TATTTTTTTTTAAATATCGATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATa < 2:4787106/147‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTGG‑ATTTAAAAAAAAAAATAAAA‑TATTTTTTTTTAAATAAAGAGATAAACAAAACAAAAACCACACAAAGAAAAAAAATAGAGGCGGGGAAGGCAAAAAAACCGCCAcccccaag > 1:3370571/1‑144 (MQ=255) ccACGTAAATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAggg < 2:4577850/149‑1 (MQ=255) aCGTACATTTTCATATCCTGTCGTTTTTTTTAG‑ATTTAAAAATATAATTTAAT‑TTTTTTTTTTTAAATTTCGTGATAAAGATAACAAAAAAGACAATTTGTAAATTTTTAGAGGTGGGTAAGGGCAAATAACGGCCTCCCGAGAgggga > 2:3410519/1‑147 (MQ=255) cGTACATTTTCATATCCTGTCGTTTGTTTTAG‑ATTTGAAAATATAATGAAAA‑TATTTTTTTTTAAATATCTCGATAACCATAACAAAAAAGTCAATATTAAATATATTCTGGGAGTGAAATGCAAAAAAAAGGCCACCCGATAGGGGAg > 2:2284561/1‑149 (MQ=255) cGTACATTTTCATATCCTGTCGTGTGTTTTCG‑ATTTAAAAATATAATTTAAT‑TATTTTTTTTTAAAAATCGAGATAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGGAAGGCAAAAAAACGGCCACCCGATAGGGAAg > 2:812216/1‑149 (MQ=255) aCATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGCGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCg < 2:2890747/149‑1 (MQ=255) aaTTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 2:3852163/148‑1 (MQ=255) ttatCGTGTTTTTTTTTTTCT‑TTTAAAATATATATTTATAT‑TTTTTTTTTTTAAATATCTATATATCTAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAg < 1:152777/148‑1 (MQ=255) tCCTTTCTTTTTTTTTCT‑ATTAAAAAATATAATTATTT‑TTTTTTTTTTAAATTATCTATAAAACTAACAAAACAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgc < 1:1348954/149‑1 (MQ=255) tgtgtttttttttCT‑ATTACAAAATATAATTAATT‑TTTTTTTTTTTAATTAGCGAGATAACGATAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGcgcg < 1:4531818/144‑1 (MQ=255) tttgtttTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:4745730/1‑149 (MQ=255) gtttTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTAGTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 1:130903/1‑149 (MQ=255) ttttCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATCGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 2:4052954/1‑149 (MQ=255) ttttCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTGTTAt > 1:4031908/1‑149 (MQ=255) tCG‑ATTTCAAAATATAATTAAAT‑TATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc < 2:2056954/149‑1 (MQ=255) g‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:4999848/1‑149 (MQ=255) g‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:5000198/1‑149 (MQ=255) g‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:2922927/1‑149 (MQ=255) | CAGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCG‑ATTTCAAAATATAATGAAAT‑TATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGG > CP009273/2170561‑2170856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |