| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,757 | T→A | 9.9% | intergenic (‑74/+234) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,757 | 0 | T | A | 9.9% | 720.2 / 9.1 | 225 | intergenic (‑74/+234) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base T (128/69); new base A (10/17); total (138/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 228 total aligned reads displayed.
AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCT > CP009273/2170609‑2170905 | aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 2:4076970/149‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑c < 2:3623896/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑cac < 1:4706252/149‑1 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATAGAGATAACGAT‑CACaaa > 2:2083065/1‑149 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACg < 1:54825/149‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGAc < 2:2974745/149‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAAAATAAAGAAAATATTTTTTTTTTAATATAGATATAAAGAA‑AACaaaaaaaaca > 1:2058403/1‑144 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTATATATAGAGATAAAGAT‑CACAAAAACGACaa > 2:4877608/1‑149 (MQ=255) cccATACCCGCCGCGCTGTGCGTTTTTCCGCATCTGCTTTGTCGATACCCCGTACATTTTCATATCCTGTCTTTTGTTTTCTATTAAAAAATATAATGAATTTTTTTTTTTTTAAATATCTATATAACTAT‑CACAAACACGACAATATg < 2:3991136/147‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTGAAAATAAAAAGAAAATATTTTTTTTTTAATATAGAGATAAAGAT‑AAACAAAACGACAAAATGa > 1:1202034/1‑149 (MQ=255) tAACCGCCGGGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCCCGTACATTTTAATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGaaaa < 2:3368023/149‑1 (MQ=255) atcagacgcgCTGTGCGTTGTTCACCATCTGCTTTGTCGATACCACTTACATTTAAATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAat < 2:5160610/143‑1 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAATAAAGAAATTATTTTTTTTTAAATAACGAGATAACCAA‑AACAAAAACGACAATATGAAAatta > 2:2532941/1‑149 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGATTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAatta < 2:407416/149‑1 (MQ=255) gccgcGCTGTGCGTTGTACAGCATCTGCTTTGTCGATACCACGTAAATTTTCATAACCTGTCGTTTTTTTTCGATTACAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACGAT‑CACAAAAACGACAATATGAAAattatt < 2:5057987/149‑1 (MQ=255) gcgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTTTTTTAAAAAAAAAATAAATTATTTTTTTTTTAAAATATATATAAAAAA‑AACAAAAAACACAAAAATAAAAATATTGga > 1:4889219/1‑149 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGATTTGAAAAAATAATTAAATTATTTTTTTTTTTATATAGAGTTAAAGAT‑AAAAAAAAAGACAATATTTAAaatattagtgtag > 2:2289581/1‑142 (MQ=255) ggtgGGTTGTTCCGCTTGTGGTTTGTCGATACCCGGTACTTTTTCTTATCGGGTCGTTTGTTTTCGATTTCAAAATATATTGAAATTTTTTTTTTTTAAATAGCGAGATCACGAT‑CACAAACACGACAATATGAAAATTATTCgaggag < 2:1289854/148‑1 (MQ=255) gCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGa < 2:1843827/149‑1 (MQ=255) gttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAAAGAAATTATTTTTTTTTTAATATAGAGATAACGAT‑AACAAAAAAGACAAAATGAAAATTATTCGAGGAGTGtaa > 2:2858840/1‑149 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAAAAAAAAGAAAATATATTTTTTTAAAAATAGAGATAACCAT‑CACAAAAAACACAAAAAGAAAAAAAATAGAGGAGTGAAAAGC‑a > 1:5154687/1‑149 (MQ=255) gtGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGTTTTCAAAATATAATGAATTTTTTTGTTTTTAATTATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACg < 2:192705/148‑1 (MQ=255) cGATACCACTTACTTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACTAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGa < 2:3337693/149‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATATAATTAAATTATTTGTTTTTTAATATAGAGATAAAGAT‑CACAAAAAAGAAAAAATTAAAATTATTAGGTGGGGGTAATGG‑AAAAAAAAGGCCACCCgct > 2:2021854/1‑147 (MQ=255) aaaCCACTAACATTTACATATCCGGGCTTTTGTTTCCTATTACAAAAAATAATCAAATTATTTTTTTTTAAATATCGATATAACTAT‑CAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATa < 2:4787106/147‑1 (MQ=255) aCGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATATAATTTAATTTTTTTTTTTTAAATTTCGTGATAAAGAT‑AACAAAAAAGACAATTTGTAAATTTTTAGAGGTGGGTAAGGG‑CAAATAACGGCCTCCCGAGAgggga > 2:3410519/1‑147 (MQ=255) cGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAATATAATTTAATTATTTTTTTTTAAAAATCGAGATAACGAT‑AACAAAAACGACAATATGAAAATTATTCGAGGAGTGGAAGGC‑AAAAAAACGGCCACCCGATAGGGAAg > 2:812216/1‑149 (MQ=255) gTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATATATTGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGc < 2:3819118/149‑1 (MQ=255) aCATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATATTGAACTTATTTTTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCg < 2:3653608/149‑1 (MQ=255) aCATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGCGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCg < 2:2890747/149‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAAATAAAATATTTGTTTTTAAATATAGAGATAACGAT‑CAAAAAAAAGAAAAAAATTAAAATATTAGAGGAGTGAAAGGC‑AAAAAAACCGCCAACCCATAGGGAAAcccga > 2:416119/1‑146 (MQ=255) aTTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAATTAAATTATTTTTTTTTAAATATCGAGATAACGAT‑CACAAAAAACACAAAATTAAAATTATTCGAGGAGTGAAAGGC‑CAAAAAAAGGCCACCCGATAGGGAAGCCgaa > 2:2903829/1‑147 (MQ=255) ttatCGTGTTTTTTTTTTTCTTTTAAAATATATATTTATATTTTTTTTTTTTAAATATCTATATATCTAA‑AACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAg < 1:152777/148‑1 (MQ=255) atCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATTTTTTTTTAAAAATATAGATAACGATACAAAAAAAC‑ACAAAAAGAAAATTATTAGAGGAGTGAAATGC‑AAAAAAAAGGCCACCCCATAGGGAAACCCTAGCCAAGTg > 2:4519433/1‑149 (MQ=255) cTGTCTTTTGTTTTCTATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACGAT‑CAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 2:2734376/149‑1 (MQ=255) tgtgtttttttttCTATTACAAAATATAATTAATTTTTTTTTTTTTAATTAGCGAGATAACGAT‑AAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGcgcg < 1:4531818/144‑1 (MQ=255) gtttgtttTCGATTTCAAAATATAATGGAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 2:4136788/1‑149 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:4062827/1‑149 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 2:1521297/1‑149 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:4897298/1‑149 (MQ=255) tttttttCTATTAAAAAATATAATGAAATTTTTTTTTTTTAAATATCGATATAACGAA‑CACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:4466153/146‑1 (MQ=255) gtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 1:131324/1‑149 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATCGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 2:4052954/1‑149 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 1:4031852/1‑149 (MQ=255) tttCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg < 2:2814937/149‑1 (MQ=255) tctttttCAAAATATAATGAAATTTTTTGTTTTTAAATTTCTATATAACGAA‑CAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc < 2:2058403/145‑1 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:106444/1‑149 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:5000198/1‑149 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 2:1691344/1‑149 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 2:462229/1‑149 (MQ=255) aTTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 2:3050689/1‑149 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 1:2042609/1‑149 (MQ=255) tCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:1712046/1‑149 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 1:414472/1‑149 (MQ=255) aaataataATTAAATTATTTTTTTTAAAATATCTATAAACCCAA‑CAAAACCACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg < 1:4783408/144‑1 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:4125846/1‑149 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:3336825/1‑149 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:3883892/1‑149 (MQ=255) aaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:3046346/1‑149 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 1:4301373/1‑149 (MQ=255) ataATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 1:2030777/1‑149 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa > 1:4901071/1‑149 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 1:3718801/1‑149 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:865054/1‑149 (MQ=255) taattttttttttttTAAATATCGATATAACTAA‑CAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 1:4582783/142‑1 (MQ=255) gAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa > 2:221050/1‑149 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 2:646764/1‑149 (MQ=255) attattTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 2:3495361/1‑149 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 2:3469592/1‑149 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 2:3583348/1‑149 (MQ=255) attTGTTTTTAATTATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc < 2:3704969/149‑1 (MQ=255) tttGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 2:2512766/1‑149 (MQ=255) tttGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:747853/1‑149 (MQ=255) tttttttAAATATCGAGATAACGAT‑CACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt < 2:3120668/147‑1 (MQ=255) tGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt > 1:1489569/1‑149 (MQ=255) tttttCAATATCGATATCACGAG‑CACAAACACGACAATATGAAAATTATTCGAGGAGTGACAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 2:4337126/149‑1 (MQ=255) tttttAAATATCGATAAACCTAA‑CAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 1:272386/149‑1 (MQ=255) tttttAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 2:752331/1‑149 (MQ=255) ttttAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 1:1053093/1‑149 (MQ=255) ttttAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 1:1108081/1‑149 (MQ=255) ttAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt > 1:1478878/1‑149 (MQ=255) taaaaTATCGATATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt < 2:147262/147‑1 (MQ=255) aaTATCTATAAAACTAA‑CAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 1:2289581/149‑1 (MQ=255) aaTATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa > 2:1947273/1‑149 (MQ=255) aaTATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGATATGTa > 2:4556312/1‑149 (MQ=255) atatCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:4827903/1‑149 (MQ=255) atatCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:4269009/1‑149 (MQ=255) atatCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCACGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 1:1445496/1‑149 (MQ=255) tCGAGATAACGAT‑CACAAAAACGACAAAATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATTCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 1:3364733/1‑149 (MQ=255) taTAACGAA‑CAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGAt < 1:3428175/148‑1 (MQ=255) gaTAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGAt > 1:2883235/1‑149 (MQ=255) aaCGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAg > 1:1596469/1‑149 (MQ=255) aaCGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAg > 1:1595563/1‑149 (MQ=255) aCGAT‑CACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa < 1:3007551/149‑1 (MQ=255) aCGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:2586782/1‑149 (MQ=255) aCGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:2586905/1‑149 (MQ=255) aCGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:2932670/1‑149 (MQ=255) ccaT‑CACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGAc < 1:1752002/147‑1 (MQ=255) aT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc < 1:3883892/149‑1 (MQ=255) aT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 1:616300/1‑149 (MQ=255) | AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAT‑CACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCT > CP009273/2170609‑2170905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |