| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,758 | C→A | 9.1% | intergenic (‑75/+233) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,758 | 0 | C | A | 9.1% | 638.2 / 3.3 | 219 | intergenic (‑75/+233) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (115/71); new base A (23/10); total (138/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 230 total aligned reads displayed.
ATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTT > CP009273/2170610‑2170906 | atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 2:3623896/149‑1 (MQ=255)atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 1:4515834/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac < 1:4704468/149‑1 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAA‑ATAAATAAAATATTTTTTTTTATATATCGAGATAAAGATaaca > 1:5186311/1‑149 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:2974723/149‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAAA‑ATAAAGAAAATATTTTTTTTTTAATATAGATATAAAGAAAACaaaaaaaaca > 1:2058403/1‑144 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAAT‑ATAATGAAATTATTTTTTTTTATATATAGAGATAAAGATCACAAAAACGACaa > 2:4877608/1‑149 (MQ=255) aCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAA‑ATAAATAAATTATTTTTTTTTTAATATACAGAGAACGATCACAAAAAcaaaaaaa > 2:4079703/1‑142 (MQ=255) aCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTAAAAAA‑AAAAATTAATAATTTTTTTTTTAATATATATATAAACATAACAAAAAAGACaaaa > 1:349895/1‑147 (MQ=255) cccATACCCGCCGCGCTGTGCGTTTTTCCGCATCTGCTTTGTCGATACCCCGTACATTTTCATATCCTGTCTTTTGTTTTCTATTAAAAAAT‑ATAATGAATTTTTTTTTTTTTAAATATCTATATAACTATCACAAACACGACAATATg < 2:3991136/147‑1 (MQ=255) tAACCGCCGGGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCCCGTACATTTTAATATCCTGTCGTTTGTTTTCTATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGaaaa < 2:3368023/149‑1 (MQ=255) atcagacgcgCTGTGCGTTGTTCACCATCTGCTTTGTCGATACCACTTACATTTAAATATCCTGTCGTTTGTTTTCTATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAat < 2:5160610/143‑1 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAA‑ATAAAGAAATTATTTTTTTTTAAATAACGAGATAACCAAAACAAAAACGACAATATGAAAatta > 2:2532941/1‑149 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGATTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAatta < 2:407416/149‑1 (MQ=255) gccgcGCTGTGCGTTGTACAGCATCTGCTTTGTCGATACCACGTAAATTTTCATAACCTGTCGTTTTTTTTCGATTACAAAAT‑ATAATGAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAattatt < 2:5057987/149‑1 (MQ=255) gcggtgCGTTGTACAGCATCTGCTTTGTCTATACCACGTAAATTTTCATCGCCTGTCGTTTGTTTTCTTTTTCAAAAT‑ATATTGAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCgagg < 1:2508782/146‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGATTTGAAAAA‑ATAATTAAATTATTTTTTTTTTTATATAGAGTTAAAGATAAAAAAAAAGACAATATTTAAaatattagtgtag > 2:2289581/1‑142 (MQ=255) gttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGAATTAAAAAA‑ATAAAGAAATTATTTTTTTTTAAATATAGAGATAACGATAAAAAAAACGAAAAAATTAAAATTATTAGAGGAGTGaaa > 2:2857427/1‑149 (MQ=255) gttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTTTTTAAAAATAAAAATAAAATAATTTTTTTTTAAA‑AAATAGATAAAAAAAAAAAAAAAGACAATAATAAAATTATTAGAAGAGttgta > 1:1583049/1‑145 (MQ=255) tttaccgCATCGGCTTTGGCGACACCACGTACATTTACATATCCTGTCGTTTGTTTCCTATTACAAAAT‑ATAATGAAATTATTTGTTTTAAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 2:4460283/143‑1 (MQ=255) aGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAA‑ATAAATCAAATATTTTTTTTTTAAAAAAGGGATAACGATAACAAAAACCAAAAAATGTAAATTATTCGGGGGGGGAAAGGC‑acaa > 2:1498465/1‑149 (MQ=255) ttatGCTTTGTCGAAACCACTTACATTTACATATCCTGTCTTTTGTTTTCTATTTCAAAAT‑ATAATGAATTTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑aaaaaaa < 2:2792910/146‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGTTTTTAAAAAA‑ATAATTAAAATTTTTTTTTTTTAATATAGGGATTAACAACACAAAAACCACAAAAATTAAATTAATAGAGGAGTGTAAGGG‑caaaaaa > 2:3492374/1‑149 (MQ=255) tGTCGATACCAGGTAATTTTTCTTATCGTGTCGTTTGTTTTCGTTTTAAAAAT‑ATATTGAATTTATTTTTTTTTAATTATCGTTATAACTATCACAAAAACGACAATATGAAAATTATTCGTGGAGTGAAAGGC‑AAAAAAACGGCCTcc < 1:417876/149‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAT‑ATAATTAAATTATTTGTTTTTTAATATAGAGATAAAGATCACAAAAAAGAAAAAATTAAAATTATTAGGTGGGGGTAATGG‑AAAAAAAAGGCCACCCgct > 2:2021854/1‑147 (MQ=255) aaaCCACTAACATTTACATATCCGGGCTTTTGTTTCCTATTACAAAAA‑ATAATCAAATTATTTTTTTTTAAATATCGATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATa < 2:4787106/147‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAAA‑AAAAATAAAATATTTTTTTTTAAATAAAGAGATAAACAAAACAAAAACCACACAAAGAAAAAAAATAGAGGCGGGGAAGGC‑AAAAAAACCGCCAcccccaag > 1:3370571/1‑144 (MQ=255) aCGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAAT‑ATAATTTAATTTTTTTTTTTTAAATTTCGTGATAAAGATAACAAAAAAGACAATTTGTAAATTTTTAGAGGTGGGTAAGGG‑CAAATAACGGCCTCCCGAGAgggga > 2:3410519/1‑147 (MQ=255) cGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAT‑ATAATTTAATTATTTTTTTTTAAAAATCGAGATAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGGAAGGC‑AAAAAAACGGCCACCCGATAGGGAAg > 2:812216/1‑149 (MQ=255) gTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAAT‑ATATTGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGc < 2:3819118/149‑1 (MQ=255) tACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAA‑ATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATAACAAAAAAGACAAAAAGTAAATTATTTGAGGGGTGGAAGGC‑CAAAAAAACGCCGCCCCAAAGGGACGcc > 2:2076720/1‑149 (MQ=255) aCATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGCGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCg < 2:2890747/149‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAA‑ATAAATAAAATATTTGTTTTTAAATATAGAGATAACGATCAAAAAAAAGAAAAAAATTAAAATATTAGAGGAGTGAAAGGC‑AAAAAAACCGCCAACCCATAGGGAAAcccga > 2:416119/1‑146 (MQ=255) aTTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAA‑ATAATTAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAAACACAAAATTAAAATTATTCGAGGAGTGAAAGGC‑CAAAAAAAGGCCACCCGATAGGGAAGCCgaa > 2:2903829/1‑147 (MQ=255) ttttCATATCCTGTCGTTTTTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 1:2965492/149‑1 (MQ=255) ttttCATATCCTGTCGTTTGTTTTTGATTTGAAAAA‑ATAATTAAATTTTTTTTTTTTTTATTTAGTGTTTACGATAAAAAAAACGAGAATATTTAAATTATTGGTTGTGTGTTAGGG‑GAAAAAAATGACTGCCGAGAGGGAGTCCGttg > 2:3642088/1‑147 (MQ=255) ttatCGTGTTTTTTTTTTTCTTTTAAAATAT‑ATATTTATATTTTTTTTTTTTAAATATCTATATATCTAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAg < 1:152777/148‑1 (MQ=255) cTGTCTTTTGTTTTCTATTTCAAAAT‑ATAATTAAATTATTTGTTTTTAAATATCGATATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 2:2734376/149‑1 (MQ=255) gtttttttTCGATTTCAAAAT‑ATATTGATTTTATTTTTTTTTAATTATGGATATATCTTTAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt < 2:1190712/149‑1 (MQ=255) tttgtttTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:4897298/1‑149 (MQ=255) tttgtttTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:4745730/1‑149 (MQ=255) gtttTCTATTTCAAAAT‑ATAATTATTTTATTTTTTTTTAAATATCTAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa < 2:1931964/149‑1 (MQ=255) gtttTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTAGTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 1:130903/1‑149 (MQ=255) ttttCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATCGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 2:4052954/1‑149 (MQ=255) ttttCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTGTTAt > 1:4031908/1‑149 (MQ=255) ttCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGc > 1:936618/1‑149 (MQ=255) tCGATTTCAAAAT‑ATAATTAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc < 2:2056954/149‑1 (MQ=255) tCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:1842082/1‑149 (MQ=255) gATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAATCGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTTTGCCgg > 1:4558467/1‑149 (MQ=255) gATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCACAGTGCGCGTGTTTTTATGCCgg > 2:4999856/1‑149 (MQ=255) aTTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 2:3050689/1‑149 (MQ=255) aTTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 2:462229/1‑149 (MQ=255) tttCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 1:2041954/1‑149 (MQ=255) tCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:1712046/1‑149 (MQ=255) aaaaT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:4125842/1‑149 (MQ=255) aaaaT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:3883892/1‑149 (MQ=255) aaaaT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:3336853/1‑149 (MQ=255) aaaaT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:4125871/1‑149 (MQ=255) aaaT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:3043738/1‑149 (MQ=255) taATTAAATTATTTTTTTTTAAATATCTAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa < 1:1093930/149‑1 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATGACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa > 1:4905067/1‑149 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa > 1:4901071/1‑149 (MQ=255) aattaaattaTTTGTTTTTAATTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc < 2:1908437/149‑1 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 1:3718849/1‑149 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 2:865054/1‑149 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:3226796/1‑149 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:4028613/1‑149 (MQ=255) taatttttttGTTTTTAATTATCGAGAAAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 1:1976542/142‑1 (MQ=255) gAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa > 2:221050/1‑149 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 2:646764/1‑149 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 2:3469592/1‑149 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 2:3583348/1‑149 (MQ=255) attTGTTTTTAATTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc < 2:3704969/149‑1 (MQ=255) tttttttAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt < 2:3120668/147‑1 (MQ=255) tGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt > 1:1489180/1‑149 (MQ=255) tttttCAATATCGATATCACGAGCACAAACACGACAATATGAAAATTATTCGAGGAGTGACAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 2:4337126/149‑1 (MQ=255) tttttAAATATCGATAAACCTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc < 1:272386/149‑1 (MQ=255) tttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 2:2502408/1‑149 (MQ=255) tttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 2:752331/1‑149 (MQ=255) ttttAATTATCGATATAACTATAAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt < 1:1176758/149‑1 (MQ=255) ttAAATATCGAGATACCGATCACAAAACCGACAATAAGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt < 2:3299562/149‑1 (MQ=255) taaaaTATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt < 2:147262/147‑1 (MQ=255) aaaTATCGATATAACTAAAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGt < 1:4788686/149‑1 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGt > 2:1673813/1‑149 (MQ=255) aaTATCTATAAAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 1:2289581/149‑1 (MQ=255) aaTATCGATATAACGAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 1:651748/149‑1 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGATATGTa > 2:4556312/1‑149 (MQ=255) atatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:4827903/1‑149 (MQ=255) gataTAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg < 1:1451094/146‑1 (MQ=255) gagaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg > 1:4459616/1‑149 (MQ=255) gagaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg > 1:1402973/1‑149 (MQ=255) ataTAACGAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa < 1:576962/147‑1 (MQ=255) gaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGAt > 1:2883223/1‑149 (MQ=255) aaCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAg > 1:1596233/1‑149 (MQ=255) aCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:2932670/1‑149 (MQ=255) aCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:2586905/1‑149 (MQ=255) ctaacacaACCACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGAc < 1:1752409/145‑1 (MQ=255) acaacacaAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGAc < 1:1751984/145‑1 (MQ=255) aTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 1:429412/1‑149 (MQ=255) cacaAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCtt < 1:1039020/149‑1 (MQ=255) | ATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAT‑ATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTT > CP009273/2170610‑2170906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |