| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,263,502 | C→T | 5.1% | intergenic (+541/+73) | yhaC → / ← rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,263,502 | 0 | C | T | 5.1% | 556.8 / 10.8 | 199 | intergenic (+541/+73) | yhaC/rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| Reads supporting (aligned to +/- strand): ref base C (133/50); new base T (2/8); total (135/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 202 total aligned reads displayed.
AAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTC > CP009273/3263354‑3263648 | aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGc < 2:2528759/149‑1 (MQ=35) aaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACCGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAACCAGGTGAAACTGACCGATAAGCCGCGTTCTGTTGGGGAGAGcg > 1:324261/1‑149 (MQ=11) aCCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTg < 1:3333405/149‑1 (MQ=37) ccGATAAGCCGCTTTCTTTTGGGTATCGTGTCGTGGACAGTCATTCATCTTTCGGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTgg < 1:1317703/149‑1 (MQ=255) gCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtca < 1:1480025/149‑1 (MQ=37) gCCGCATTCTTTTGGTTATCGTGTCGAGGACAGTCATTACTATTAAGGCCACTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtca < 2:1216161/149‑1 (MQ=11) tttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTc < 2:4417876/149‑1 (MQ=37) ttGGGTATAGTGTCGTGGACAGTCATTCCTATTTAGGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGTTTTTTACGTACAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCt < 2:1330714/149‑1 (MQ=11) gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGTCCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACCTTCAATCATCATTATGc > 1:3781763/1‑149 (MQ=11) tataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGCGTCGTGGCCAGGCATTCATCTTTCTGcccc > 1:2795588/1‑149 (MQ=255) taGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTc < 2:2849173/149‑1 (MQ=37) gtgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCa < 1:29654/149‑1 (MQ=37) gtgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCa < 1:28939/149‑1 (MQ=37) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCaaaa > 1:315134/1‑149 (MQ=37) tGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCAGCCCCTCCAAAAGCa > 2:4627054/1‑149 (MQ=37) tGGACAGTCATACTTCTTTCTGGCCCTCCACAAGCATAAACCCGCCGCAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCa < 2:870070/149‑1 (MQ=11) gACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGTCAGTCAATAAAATTTATTCCCCACCCAAAACaaa > 1:887167/1‑149 (MQ=11) gACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTATGCCCCTACAAAAGCcaa > 2:1247829/1‑149 (MQ=255) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGTCATTCATATTTATGCCCCTCCAAAAGCaaaa > 1:2388241/1‑149 (MQ=255) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATTCCCCACCAAAATCaaaaaac > 1:4047875/1‑147 (MQ=255) ttcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgcc > 1:3416090/1‑149 (MQ=37) ttcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATCATCATTCGGCCCCTCCAAAAGCAAAAACccgcc > 1:2573560/1‑149 (MQ=255) tCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAg > 1:4305918/1‑149 (MQ=37) tttCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCg > 2:4520586/1‑149 (MQ=255) tcggCCCCTCCATAAGCAAACACCCGCCGAAGCGGGTTTTTACGTAACCCAGCTGAATCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCggg < 2:3745427/146‑1 (MQ=11) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTAGAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAATAGCAAAAACCCGCCGACGCggggtg > 2:411624/1‑146 (MQ=11) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTGTTGGGTATAGCGTCGTGGACAGTCATTCATCGTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCggggtg > 2:1531218/1‑146 (MQ=255) ccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGTAAATCATATTTCAGACCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTa > 1:1735237/1‑149 (MQ=11) cTCCACAAGCACAAACCCGCCGCATCGGTTTATTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAc < 2:4644399/149‑1 (MQ=11) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCCTTCATCTTTCTGCCCCTCCCAAAGCAAAATCCCGCCGGAGGGGGgttgttc > 2:3626588/1‑145 (MQ=11) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTGTTTACGTAAACCAGGTGAAACTGACCGATACGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTGTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTaa > 2:5045160/1‑148 (MQ=255) tCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTCTAGCGTCGTGGACCGTCATGCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg > 2:3707095/1‑149 (MQ=255) tCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTTCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg > 2:1002195/1‑149 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGCAGCGGGTTTTTACGt > 1:726064/1‑149 (MQ=255) cAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTGTTACGTa > 2:2467993/1‑149 (MQ=37) aaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCCATCATATTTATGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTaaa > 1:4792864/1‑149 (MQ=11) aaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGACGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTATGCCCCGCCAAAAGAAAAAAACCGCCCAAGCGGGTTTTTAAGTaaa > 1:4532756/1‑149 (MQ=11) tcAAAAACCCGCCGTACCGGTTTATTACGTAAACCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCa < 2:2732611/148‑1 (MQ=11) aaaaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTGTTTACGGAAATCAgg > 2:1995008/1‑149 (MQ=255) aaaaCCCGCCGAAGCGGGTTTTTCCGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTCTAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCACAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAACTCCGGt > 2:5067629/1‑149 (MQ=11) aaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGa > 2:179511/1‑149 (MQ=37) aaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGTCAATCATCTTTCTTCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGa > 2:615158/1‑149 (MQ=255) aCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAACCCCCGAAGCGGGTTTTTAAGTAAATAAGGTGaa > 1:667761/1‑149 (MQ=11) aCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATCGTTCTGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGGAAATCATGTGaa > 1:3261283/1‑149 (MQ=11) cccGCCGCATCGGGTTATTACGTAAACCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGaaa < 2:4086053/149‑1 (MQ=11) cccGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCCATCATCTTTATGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAATAAAGTGtaa > 1:142362/1‑149 (MQ=11) cccGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGaaa > 2:1659556/1‑149 (MQ=37) cgccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCTTGTACAGTCCATCAACTTTCAGCCCCACCAAAAGCAAAAACCCGCAGAAGCGGGTTTTTACGGAAATCAGGGGAAACt > 2:4266275/1‑149 (MQ=11) gccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGTCAGTCATTCATGTTTATGCCCCTCCAAAATCAAAAAACCGCCGACCCGGGGTTTTACGTAAATCAGGTGTAACtt > 1:3667316/1‑148 (MQ=11) ccgAAGCTGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGa < 1:3158154/149‑1 (MQ=37) gAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTGTGGGTATAGCGTCGTGGCCAGGCATTCAACTGTCGGCCCCCCCAAAAGCAAAAAACCGCCGAAGCGGGGTTTTACGTAAAACAGGTGAAACTGAcc > 1:803837/1‑149 (MQ=11) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCg > 1:1871491/1‑149 (MQ=37) gCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGAt > 2:1413485/1‑149 (MQ=37) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATAATATTTCTTCCCCACCAAAAACAAAAAACCCCCCAACCGGGTTTTTAAGTAAAAAAGGTGAAACAGACCCATaa > 1:3936206/1‑149 (MQ=11) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGTCAGTCATTCATCTTTCTTGCCCTCCAAAAGCAAAAAACCGCCGGAGCGGGGTTTTTAGGAAATAAGGTGAAACTGACCGATAAg > 1:1086921/1‑149 (MQ=11) ggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCGCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATAAGGTGAAAATGACCGATTAg > 1:5150909/1‑149 (MQ=11) tttttACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGcc > 2:1653635/1‑149 (MQ=17) aCGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGtt < 2:3095153/149‑1 (MQ=40) cttAAATCATGTAAAACTGACCGATCAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGACCTTCTTCTTACTGCCCCTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTc < 2:2423169/147‑1 (MQ=11) aaaaCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATATTTCTGCCCCTACAAAAGCAAAAACCCGCCGAAGAGGGTGTTTAAGTAAATCAGGGGAAAAAGACCGATAAGCCGGGTTCttt > 2:1071288/1‑147 (MQ=11) aaaCCAGGTGAAACTGCCCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAGTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGt < 2:2965932/149‑1 (MQ=255) aaaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGt > 2:2406515/1‑149 (MQ=255) aaaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGGTCTGt > 2:2044915/1‑149 (MQ=255) caacAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTc < 2:2172798/146‑1 (MQ=255) aaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGGAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTc > 1:4655998/1‑149 (MQ=255) aaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTc > 2:1123015/1‑149 (MQ=255) aCCAGGAGAAACTGACCGATAAGCCGCGTTCATGTGGGTATAGCGTCGTGGACAGGCCATCATCTGGATGCCCCTCCAAAAGCAAAAACCCGCCGACGCGGGTTTATACGGACATCAGGGGACACAGACCGATAAACCGGGGTcgggcc > 2:2605214/1‑144 (MQ=2) ccAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGGGAAACTGACCGATAAGCCGGGTTCTGTCGt > 2:3364467/1‑149 (MQ=255) ccAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGt > 2:2287024/1‑149 (MQ=255) cAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg < 1:2123874/149‑1 (MQ=255) ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGa < 1:1961307/48‑1 (MQ=38) gTGAAACTGACCGATACGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 1:2409977/149‑1 (MQ=255) gAAACTGACCGATAAGCCGCTTTCTTGTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAg < 2:3533099/149‑1 (MQ=255) aCTGACCGATAAGCCGCATTCTTTTGGGTATCGAGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtca < 2:4264102/149‑1 (MQ=255) cTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcat < 1:4506676/149‑1 (MQ=255) cTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCATTATGCCCCACCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAAATGACCGATAAGCCGGGTTCTTTAGTGGAAAGtcaa > 1:1678972/1‑148 (MQ=11) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACAGACCGATAAGCCGGGTTCTGTCGTGGACCGtcatt > 2:3452699/1‑149 (MQ=255) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCCAAGCGGGGTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt > 2:4190174/1‑149 (MQ=255) gACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATATTTATGCCCCACCAAAAGCAAAAAACCGCCCAATCGGGGTTTTAAGTAAATAAGGTGAAAATGTCCGCTAAGCCGGGGTCTGTCGTGGACAGtaattc > 2:3947264/1‑149 (MQ=17) cGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTTAATCAGGTGAAAATGAACGAAAAGCCGGGTTCTTTCGTGGACAGTCATTCATc > 2:4881631/1‑149 (MQ=17) cGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAAATTTCTGCCCCGCCCAAAGCAAAAAACCCCCCAAGCGGGTTTTTACGTAAATCAGGTGAAAAAGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATc > 2:3499260/1‑149 (MQ=17) aTAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTTCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGTCCGATAAGCCGGGTTCTGTCGTGGACAGGCATTCAtata > 2:4935564/1‑149 (MQ=255) aTAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACACTCAATCATAATTCTTCCCCTCCAAAAGCAAAAACCCCCCCAAGCGGGTTTTTAACTAAATCAGGTGAAACAGACCCAAAAACCCGGTTCTGTCGTGGACAGgcattaaaata > 2:2160022/1‑143 (MQ=14) gCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGcc < 2:4656452/149‑1 (MQ=255) cGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAg > 2:2924501/1‑149 (MQ=255) cGCTTTCTTTTGGGTATAGCGTCGTGGACAGTAAATCATATTTAAGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCATGTGAAACTGAACCAAAAGCCCGGTTCTTTCGTGGACCTTCATTCATAAAGGCCAg > 1:5081235/1‑149 (MQ=17) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGAAAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGc > 2:1895872/1‑149 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGTAAATCAGGGGAAACTGACCGATAAGCCGGGTTCTGGCGTGGACAGTCATTCATCTAGGCCAGc > 2:1171426/1‑149 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAATCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGc > 2:1476842/1‑149 (MQ=255) ctttctttTGGGTATAGCGTCGTGGACAGTCAATCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCAACTAGGCCAGCa > 1:1194111/1‑149 (MQ=255) ttctttTGGTTATTGTGTCGTGGAAAGTCATTCATCTTTCTGCACCTCCAACAGGAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTTGACTGTCATTCATCTAGGCCAGCTAt < 1:975703/149‑1 (MQ=17) ttttGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAACAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGc < 2:2759032/149‑1 (MQ=255) ttttGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATATAGGCCAGCAATCGc > 1:2008346/1‑149 (MQ=255) ttttGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCAATAATAAAGGCCAGCAAACGc > 1:651465/1‑149 (MQ=17) ggTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACt < 1:1852895/149‑1 (MQ=255) ggTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACt < 2:3135494/149‑1 (MQ=255) ggTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACt > 1:2140958/1‑149 (MQ=255) tataGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTgg > 2:5152002/1‑149 (MQ=255) taGCGTCGTGGACAGTCAATCATCTTTCTGCCCCTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAATCAGGTGAAACAGACCGATAATCCGGGTTCTGTAGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCt > 1:2392905/1‑149 (MQ=21) aGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTc < 1:3831191/149‑1 (MQ=255) | AAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTC > CP009273/3263354‑3263648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |