| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 360104 = | 212 (0.840) | 167 (0.660) | 93/278 | NT | 44.1% | intergenic (‑38/+557) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | CP009273 | = 360286 | NA (NA) | intergenic (‑220/+375) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor | |||||
Only 100 of 415 total aligned reads displayed.
GCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACT > CP009273/359955‑360253 | gCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCa < 2:2683205/150‑1 (MQ=255) ggTAGGTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACGTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑t < 2:2598573/150‑1 (MQ=255) gTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑tt < 2:1151931/150‑1 (MQ=255) gTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑tt < 1:1924196/150‑1 (MQ=255) ccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaa‑tt > 1:3832260‑M1/147‑150 (MQ=255) cgccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTcc > 1:3639781‑M1/145‑150 (MQ=255) aGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTcc > 2:947933/1‑150 (MQ=255) aGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTcc < 1:2579341/150‑1 (MQ=255) tccgggccggtgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCt > 1:1875510‑M1/144‑150 (MQ=255) gTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCt < 1:4196954/150‑1 (MQ=255) ccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgacaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTg > 2:3388553‑M1/143‑150 (MQ=255) tCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTgg > 2:4297579/1‑150 (MQ=255) cgggccgttgcgtcgcaacgttcaactccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTgg > 1:759974‑M1/142‑150 (MQ=255) gggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGc > 2:3573624‑M1/141‑150 (MQ=255) cAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGc < 2:580472/150‑1 (MQ=255) tgccgttgcttcgcaacgttcaaatccgctcccggcggatttgtccttctcaggagagcgttctccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCa > 2:70232‑M1/140‑150 (MQ=255) aGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCa < 1:3158005/150‑1 (MQ=255) aGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCa < 2:1546410/150‑1 (MQ=255) gccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAg < 2:1924354‑M1/12‑1 (MQ=255) gCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGt < 2:287131/150‑1 (MQ=255) ccgttgcttctcaaatttcaaatcctctccctgcgtatttgtcctactcaggagatctttcaccgacaaacaacatataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGTCAGt > 1:4057193‑M1/138‑150 (MQ=255) cgttgcttcgcaacgttcaactccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagatacaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGtt > 2:2254706‑M1/137‑150 (MQ=255) cAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGtt < 2:1986581/150‑1 (MQ=255) aGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGttt < 2:2828107/150‑1 (MQ=255) tcaatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATg > 1:4328639/1‑150 (MQ=255) cttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATgg > 1:286519‑M1/132‑150 (MQ=255) aatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATggc < 2:1469256/150‑1 (MQ=255) aatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATggc > 1:3016952/1‑150 (MQ=255) tcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATggcg > 1:3679632‑M1/130‑150 (MQ=255) caaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCCTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATggcggg > 1:113054/1‑150 (MQ=255) gTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTcc < 1:2453122/150‑1 (MQ=255) ttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCCGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTg > 2:2134028/1‑150 (MQ=255) ttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTg > 2:1368360/1‑150 (MQ=255) ttACCTTGTGGAGCGACATCCAGAGGCACGTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTg < 1:2718397/150‑1 (MQ=255) ccTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGccc > 1:566933/1‑150 (MQ=255) ccTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCAATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGccc > 1:1354385/1‑150 (MQ=255) ctccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataacacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCg > 1:3272518‑M1/117‑150 (MQ=255) tccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGttt < 1:145152‑M1/15‑1 (MQ=255) tccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGttt > 2:145152‑M1/116‑130 (MQ=255) cgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCa > 2:324193‑M1/114‑124 (MQ=255) cgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCa < 1:324193‑M1/11‑1 (MQ=255) tcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgtgttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAccc < 2:3859348‑M1/40‑1 (MQ=255) agagGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCCGGGCAGTAGCTCCTATGATAAGCTGAAAAAAATGAGAATTCCGATCCCCAT‑TTCCTGGAAGTTTATGGCGGGCGTCCGGCCCGCCACCCTCCGGGCCGtt < 1:1761312/150‑1 (MQ=37) agagGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGtt > 1:1532374/1‑150 (MQ=255) agagGCACTCCCCCGCGTGCCAGCGGCTCACCAACCCGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAAGTCCGACCCCCAA‑TTCCTGGAAGTTTAGGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGtt < 2:3021898/150‑1 (MQ=37) actcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGTCGTCCGGCCAGCCACCCTCCGGGCCGTGGCTTCGc < 2:240515‑M1/58‑1 (MQ=255) actcaggagagcggtcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGcc < 2:518920‑M1/32‑1 (MQ=255) tcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa < 1:2845256‑M1/60‑1 (MQ=255) cACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAc > 2:4057812/1‑150 (MQ=255) aCCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACg > 2:2066432/1‑150 (MQ=255) cggttGCCAGCGGCTTACCACCCCGCGCCACCATCCAGGGCAGGAGCTCCTATTATAAGCTGTAAAACATGATAATTCCGACCCCCAA‑TTCCTGGCTGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGtt < 1:3862973/147‑1 (MQ=25) gcgtGCCAGCCGCTCACCAGCCAGCGCCACCCGCCCGTGCAGGAGCTCCGCGGATACGCTGGCAAACAGGAGACTTCCGAGCCCCAA‑GTCCGGGCAGTTTAGGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTc < 2:4242768/147‑1 (MQ=18) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAAt < 2:3983422/150‑1 (MQ=255) aGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCg < 2:1695711/150‑1 (MQ=255) cgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGTCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCAGTTGCTTAGCAACgttcaaataacctac < 2:3642857‑M1/76‑8 (MQ=255) cTTACCATCCAGCGCCACCATCCCGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTccc < 2:3889060/150‑1 (MQ=255) acaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGGTTCGCAACGTTCCAATCCGCACCcg < 2:2555649‑M1/78‑1 (MQ=255) caaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgtgttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGGGGCTTGGCCACCTTCAAAACCGCTCCcgg < 2:67226‑M1/79‑1 (MQ=255) aacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAt < 2:1766945‑M1/84‑1 (MQ=255) caccaTCCAGTGCCGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGGTGCTTAGCAACGTTCAAAACCCCTACCCGCGGCTTTGtgcca > 1:1983463/1‑146 (MQ=25) caccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGGTTCGCAACCGTCAAATAAGCACCCCGCGGCtttttgcaa > 1:2679555/1‑144 (MQ=25) accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTAc < 1:4297579/150‑1 (MQ=255) tccccgTGCTGGTGCTCCGTTGATAAGCTGACAAACTTGATATTTCCGAACCCAAA‑TTCCGGGCTTTTTTTGGGGGGGGTCCTGCCCCCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCa < 1:3360574/145‑1 (MQ=17) gaccggcccagtctttcgacggagcgtttgtttttatttgttgccggggtaattAA‑TTCCTGGCATTTTTGGGCGGGCGTCCGGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCa > 2:1086969‑M1/55‑150 (MQ=255) gaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCTTCGCAACGGTCAAATGCGCACCCGGCGGATTTGTGCGACtcc < 2:2972219‑M1/96‑2 (MQ=255) aaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGTGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAAACCGCTCCCGGCGGATTTGTACTACTCAgg < 2:3337770‑M1/98‑1 (MQ=255) aggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCCACGTTAAAATACGCTCCCCGCGGCTTTGTCCTACTCAGga < 2:1858030‑M1/99‑1 (MQ=255) agtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGcc < 2:2446916‑M1/32‑1 (MQ=255) agtctttcgactgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGt < 2:4260217‑M1/105‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGtt < 2:4162673/150‑1 (MQ=255) ctttcgactgagcctttggttttatttgatgcgtggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCa > 1:2134028‑M1/43‑150 (MQ=255) aGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCa < 2:3813323/150‑1 (MQ=255) ctgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCt < 1:4268958‑M1/54‑1 (MQ=255) ctgagcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCt > 2:4268958‑M1/36‑89 (MQ=255) tgatAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCGTCGCAACGTTCAAATCCGCGCCCGGCGGCTTTGTCCGACGCAGGAGCGCGTTCACCGacaaa > 2:804647/1‑150 (MQ=18) agcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaaca < 2:2504106‑M1/118‑1 (MQ=255) agcctttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAACTTAAAAAACGCTCCCGGCGGGTTTTTCCAACTCAGGAGAGCGTTCACccacaaaaa < 1:942977‑M1/118‑3 (MQ=255) tttcgttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTcc > 1:359299‑M1/29‑56 (MQ=255) gttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaa < 2:2472886‑M1/126‑1 (MQ=255) gttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCCACCTTCAAATCCGCTCCCGGCGGCTTTGTCCTACTAAGGTGAGCGGTAACCGACAAACAACAGATaa < 2:41853‑M1/126‑1 (MQ=255) ttttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCGACTCAGGAGAGCGTTCACCGACCAACCCCAGATaaa < 2:3705473‑M1/127‑1 (MQ=255) aaaaATGAGAATTCCTATCCCAAA‑TTCCTGGCAGTTTTTGGGGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaaaa < 2:2180778/150‑1 (MQ=14) ttatttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTAGCCAAGTTAAAATGCCCTACCGGCGGTATTGTGCAACTCAGGCGAGCGTTCAACGACAAACAACACATAAAAc < 1:2324037‑M1/129‑1 (MQ=255) aaCATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTAGCAAACTTAAAAAACGCGACCCGCGGAGTTTTGCAACTAAGGAGAGCGTTAAACGACCAACAACACAAAAAAc > 1:2253553/1‑150 (MQ=12) cATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGCGCGTTCACCGACAAACAACACATAAAACGa > 2:1523453/1‑150 (MQ=255) atttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTAAAATACGCACCCCGCGGATTTGTCCAACTCAGGAGAGCGTTAACCGACAAACAACAGATAAAACGa < 1:2504567‑M1/131‑1 (MQ=255) tttgatgcctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTGGCAACGTTCAAATCCGCTCCCGGGGGGTTTGTCCGACTCAGGAGGGGGGTGCCCGCCAAACAACAGATAAAacgta < 1:1675401‑M1/132‑3 (MQ=255) tCCGATCCCCAT‑TTCCTGGCTTTTTTGGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAg < 1:4165862/150‑1 (MQ=11) ctggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAg < 2:310959‑M1/140‑1 (MQ=255) tgggtaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCa > 1:3506708‑M1/10‑75 (MQ=255) tggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCa < 2:3506708‑M1/66‑1 (MQ=255) tggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTGGCAACGTTCAAATCCGCACCCGGCGGTTTTGTCCCTCTCCGGAGAGCGTTCACCCCCAAACAAAAGATAAATCCAATGGCCCAGt < 1:969356‑M1/141‑1 (MQ=255) tggggaattAA‑TCCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTCCTAATCAGGAGAGGGTTAACCGACAAACAACAGATAAAAAGAAAGGCCCAGt < 1:2463217‑M1/141‑1 (MQ=255) ggggaattAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATa > 1:1051097‑M1/9‑133 (MQ=255) aTCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCTTCGCCACGTTCAAATCCGCTCCCGGCGGCTTTGTGCTAATCAGGGGGGGGGTCCCCGACCAACAACAGATTAAACGGAAGGCCCCGTCtt > 2:3679632/1‑150 (MQ=11) accccAATTTCCTGGCTGTTTTTGGCGGGCGTCCTGCCCCCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCtt < 1:490327/149‑1 (MQ=11) ccccAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTc < 1:628891/150‑1 (MQ=35) ccccAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTc < 1:3563201/150‑1 (MQ=35) cccAA‑TTCCTGGCTGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCg < 1:3970826/150‑1 (MQ=25) aa‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTGGCAACCGTCAAAAACCCTCCCCGCGGTTTTTTACTAAAAAGGCGTGCGTTGAACGCCAAACAACAGAAAAAACGAAACGCCCCGGCTTTCGACt > 1:1260792/1‑150 (MQ=2) | GCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAA‑TTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACT > CP009273/359955‑360253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |