New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3904966250 (0.990)5 (0.020) 4/278 NT 2.0% intergenic (‑81/+233) pstS/glmS periplasmic phosphate binding protein, high‑affinity/L‑glutamine:D‑fructose‑6‑phosphate aminotransferase
?CP009273 4487998 = NA (NA)intergenic (+241/‑91) intB/insC1 pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase/IS2 repressor TnpA
Rejected: Frequency below/above cutoff threshold.

Only 100 of 273 total aligned reads displayed.

CACAGAGAAAGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAGCCGAAGATGA  >  CP009273/3904817‑3905113
                                                                                                                                                     |                                                                                                                                                   
cacaGAGAAAGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGt                                                                                                                                                     <  2:747933/150‑1 (MQ=255)
  caGAGAAAGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTaa                                                                                                                                                   <  2:2108871/150‑1 (MQ=255)
   agagAAAGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAg                                                                                                                                                  <  1:2698840/150‑1 (MQ=255)
    gagaAAGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAgg                                                                                                                                                 >  1:4203858/1‑150 (MQ=255)
      gaAAGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGaa                                                                                                                                               <  1:1171197/150‑1 (MQ=255)
       aaaGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAat                                                                                                                                              >  2:418153/1‑150 (MQ=255)
          gCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATg                                                                                                                                           <  2:1933409/150‑1 (MQ=255)
          gCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATg                                                                                                                                           <  2:428909/150‑1 (MQ=255)
             cTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACa                                                                                                                                        <  1:4330503/150‑1 (MQ=255)
             cTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACa                                                                                                                                        >  1:2749216/1‑150 (MQ=255)
               cATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGt                                                                                                                                      >  2:94241/1‑150 (MQ=255)
               cATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGt                                                                                                                                      >  2:1671931/1‑150 (MQ=255)
                aTCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGtt                                                                                                                                     <  1:3647660/150‑1 (MQ=255)
                 tCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGttt                                                                                                                                    <  2:662473/150‑1 (MQ=255)
                 tCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGttt                                                                                                                                    <  1:87816/150‑1 (MQ=255)
                   gATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGACTATGACAGTTTTa                                                                                                                                  >  2:901730/1‑150 (MQ=255)
                    aTAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTAt                                                                                                                                 <  1:3081679/150‑1 (MQ=255)
                     tAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATg                                                                                                                                >  2:3811314/1‑150 (MQ=255)
                     tAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATg                                                                                                                                <  1:774023/150‑1 (MQ=255)
                      aaGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGa                                                                                                                               >  2:3447527/1‑150 (MQ=255)
                      aaGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGa                                                                                                                               >  2:248008/1‑150 (MQ=255)
                      aaGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGa                                                                                                                               >  1:3744785/1‑150 (MQ=255)
                       aGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGAc                                                                                                                              <  2:1433962/150‑1 (MQ=255)
                            gcggcgACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACagaga                                                                                                                         <  2:592949/150‑1 (MQ=255)
                               gcgACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGAt                                                                                                                      >  2:3866530/1‑150 (MQ=255)
                               gcgACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGAt                                                                                                                      <  2:449498/150‑1 (MQ=255)
                                cgACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATa                                                                                                                     >  2:1159163/1‑150 (MQ=255)
                                cgACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATa                                                                                                                     <  1:3371323/150‑1 (MQ=255)
                                  acaacaGTAGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATaaa                                                                                                                   <  1:4115667/150‑1 (MQ=255)
                                   caacaGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAg                                                                                                                  <  1:908397/150‑1 (MQ=255)
                                       aGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCtt                                                                                                              <  2:1250819/150‑1 (MQ=255)
                                         ttGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCa                                                                                                            <  1:1110334/150‑1 (MQ=255)
                                         ttGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCa                                                                                                            <  2:827829/150‑1 (MQ=255)
                                           gCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGt                                                                                                          <  2:3514245/150‑1 (MQ=255)
                                                ggtggtACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGAt                                                                                                     <  2:1746447/150‑1 (MQ=255)
                                                ggtggtACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGAt                                                                                                     <  2:3152211/150‑1 (MQ=255)
                                                  tggtACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGAttt                                                                                                   >  1:4308399/1‑150 (MQ=255)
                                                     tACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTaaa                                                                                                >  1:2534628/1‑150 (MQ=255)
                                                       cGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATa                                                                                              <  2:1671149/150‑1 (MQ=255)
                                                        gCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATaa                                                                                             <  1:2432235/150‑1 (MQ=255)
                                                         aaTAACTTTAATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTAATAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAg                                                                                            <  2:1577872/149‑1 (MQ=255)
                                                          aTAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGc                                                                                           <  1:1254408/150‑1 (MQ=255)
                                                           tAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCg                                                                                          <  1:1408409/150‑1 (MQ=255)
                                                                 tCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGata                                                                                    <  1:3705078/150‑1 (MQ=255)
                                                                 tCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGata                                                                                    <  2:3278077/150‑1 (MQ=255)
                                                                  cATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGatat                                                                                   >  2:2959937/1‑150 (MQ=255)
                                                                    tAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTc                                                                                 <  1:219091/150‑1 (MQ=255)
                                                                    tAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTc                                                                                 <  1:3071924/150‑1 (MQ=255)
                                                                      aTGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAg                                                                               >  1:1763499/1‑150 (MQ=255)
                                                                        gTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTc                                                                             <  1:32747/150‑1 (MQ=255)
                                                                            ccTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAAtt                                                                         <  1:1441831/150‑1 (MQ=255)
                                                                             cTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTa                                                                        <  1:387443/150‑1 (MQ=255)
                                                                               gggAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACa                                                                      <  2:412197/150‑1 (MQ=255)
                                                                                 gaggaTTCATAAAGCATTGTTTGTTGGCTACGCGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACaaa                                                                    <  2:1945918/150‑1 (MQ=255)
                                                                                 gaggaTTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACGGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACaaa                                                                    <  1:3373703/150‑1 (MQ=255)
                                                                                 gaggaTTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACaaa                                                                    >  2:3037479/1‑150 (MQ=255)
                                                                                   ggaTTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                  <  1:1822043‑M1/150‑84 (MQ=255)
                                                                                    gaTTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACAt                                                                 <  1:3016111/150‑1 (MQ=255)
                                                                                     aTTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACAtt                                                                >  1:227471/1‑150 (MQ=255)
                                                                                     aTTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACAtt                                                                <  2:502958/150‑1 (MQ=255)
                                                                                       tCATAAAGCATTGTTTGTTGGCTACNAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATtaa                                                              <  1:2618310/150‑1 (MQ=255)
                                                                                       tCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATtaa                                                              <  1:445627/150‑1 (MQ=255)
                                                                                       tCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATtaa                                                              <  2:4143699/150‑1 (MQ=255)
                                                                                        cATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATtaat                                                             <  1:659469/150‑1 (MQ=255)
                                                                                        cATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATtaat                                                             <  1:2336050/150‑1 (MQ=255)
                                                                                         aTAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATtaata                                                            <  1:2157875/150‑1 (MQ=255)
                                                                                               cATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAag                                                      >  2:3524952/1‑150 (MQ=255)
                                                                                               cATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAag                                                      <  1:3922108/150‑1 (MQ=255)
                                                                                               cATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAag                                                      >  2:1493420/1‑150 (MQ=255)
                                                                                                aTTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAaga                                                     <  2:676061/150‑1 (MQ=255)
                                                                                                aTTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAaga                                                     <  2:675880/150‑1 (MQ=255)
                                                                                                 ttgtttgtTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAagag                                                    <  2:534459/150‑1 (MQ=255)
                                                                                                 ttgtttgtTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAagag                                                    >  2:3681201/1‑150 (MQ=255)
                                                                                                  tgtttgttGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg                                                   <  1:3760327‑M1/150‑99 (MQ=255)
                                                                                                  tgtttgttGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAgaga                                                   >  1:1005627/1‑150 (MQ=255)
                                                                                                  tgtttgttGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAgaga                                                   >  1:1689154/1‑150 (MQ=255)
                                                                                                    tttgttGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATg                                                 <  1:3675353/150‑1 (MQ=255)
                                                                                                    tttgttGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATg                                                 <  1:418153/150‑1 (MQ=255)
                                                                                                           gCTACGAGAAGCAAAATAGGACAAACAGATGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGaaa                                          <  2:3229816/150‑1 (MQ=255)
                                                                                                               cGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAAtt                                      <  2:2570459/150‑1 (MQ=255)
                                                                                                               cGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAAtt                                      <  2:1603354/150‑1 (MQ=255)
                                                                                                                 agaAGCAAAATAGGACAAACAGGTGACAGTTATATGTTATGAATATGACTGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTTAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAAtttt                                    <  2:1134489/150‑1 (MQ=255)
                                                                                                                  gaAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTc                                   >  2:862971/1‑150 (MQ=255)
                                                                                                                     gCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCAtt                                <  1:566864/150‑1 (MQ=255)
                                                                                                                      cAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTc                               >  1:1563029/1‑150 (MQ=255)
                                                                                                                         aaTAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCtgt                            <  2:1313573/150‑1 (MQ=255)
                                                                                                                          aTAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCtgtg                           >  2:354996/1‑150 (MQ=255)
                                                                                                                            aGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGAc                         <  1:419021/150‑1 (MQ=255)
                                                                                                                             ggACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACa                        <  2:4001835/150‑1 (MQ=255)
                                                                                                                             ggACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACa                        <  2:2389228/150‑1 (MQ=255)
                                                                                                                              gACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACag                       <  1:4264431/150‑1 (MQ=255)
                                                                                                                                cAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACagag                     <  1:2989895/150‑1 (MQ=255)
                                                                                                                                    cAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGaaaa                 >  2:3312381/1‑150 (MQ=255)
                                                                                                                                         gACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAg            >  2:3316243/1‑150 (MQ=255)
                                                                                                                                            aGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGACAAAGTAGCCg         >  1:4031901/1‑150 (MQ=255)
                                                                                                                                              ttATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAGCCGaa       <  2:1375914/150‑1 (MQ=255)
                                                                                                                                               tataTTTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAGCCGAAg      <  2:1005404/150‑1 (MQ=255)
                                                                                                                                               tataTGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAGCCGAAg      >  1:370059/1‑150 (MQ=255)
                                                                                                                                                  atGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAGCCGAAGATg   >  2:2683214/1‑150 (MQ=255)
                                                                                                                                                   tGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAGCCGAAGATGa  <  1:2102764/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CACAGAGAAAGCACTCATCGATAAGGTCGCGGCGACAACAGTTGCGACGGTGGTACGCATAACTTTCATAATGTCTCCTGGGAGGATTCATAAAGCATTGTTTGTTGGCTACGAGAAGCAAAATAGGACAAACAGGTGACAGTTATATGTAAGGAATATGACAGTTTTATGACAGAGAGATAAAGTCTTCAGTCTGATTTAAATAAGCGTTGATATTCAGTCAATTACAAACATTAATAACGAAGAGATGACAGAAAAATTTTCATTCTGTGACAGAGAAAAAGTAGCCGAAGATGA  >  CP009273/3904817‑3905113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.