| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 567,543 | G→T | 6.9% | D212Y (GAT→TAT) | ybcM → | DLP12 prophage; putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 567,543 | 0 | G | T | 6.9% | 565.5 / 3.6 | 185 | D212Y (GAT→TAT) | ybcM | DLP12 prophage; putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (77/86); new base T (2/20); total (79/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.48e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 188 total aligned reads displayed.
CATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAAGAGAGATAAGAAAA > CP009273/567394‑567692 | cATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACg > 2:194308/1‑150 (MQ=255) aTTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGa > 2:3990375/1‑150 (MQ=255) aTTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGa > 2:3991513/1‑150 (MQ=255) ttGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAt < 2:40836/150‑1 (MQ=255) aTAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg < 1:716565/150‑1 (MQ=255) aTAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg < 1:2837011/150‑1 (MQ=255) tAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGa < 2:545364/150‑1 (MQ=255) aaGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAg < 2:1850143/150‑1 (MQ=255) aGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAgg < 2:3577161/150‑1 (MQ=255) gTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGt < 2:2503176/150‑1 (MQ=255) cGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTa > 2:1790826/1‑150 (MQ=255) gttgttATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTaa > 2:3908607/1‑150 (MQ=255) tgttATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaat > 1:813844/1‑150 (MQ=255) tataACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaataat < 1:512843/150‑1 (MQ=255) tataACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaataat < 1:2684443/150‑1 (MQ=255) tataACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaataat < 1:1740233/150‑1 (MQ=255) taACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGc < 2:1822575/150‑1 (MQ=255) taACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGc < 1:381687/150‑1 (MQ=255) aaCCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCg > 1:3827504/1‑150 (MQ=255) aaCCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGGAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCg > 2:1503173/1‑150 (MQ=255) ccTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGtt < 2:4178973/150‑1 (MQ=255) ctgctgCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTg < 1:2431361/150‑1 (MQ=255) tgctgcTATCCGAACCCGGCACAACATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGt < 1:3662835/150‑1 (MQ=255) ctgctATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCt < 1:4299941/150‑1 (MQ=255) ctATCCGAACCCGGCACAAAATGGACCGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCt < 1:193699/150‑1 (MQ=255) ctATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCt < 1:1150747/150‑1 (MQ=255) ctATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCt > 1:2983814/1‑150 (MQ=255) tATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCta > 2:13927/1‑150 (MQ=255) aTCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAGGTGAGGTTAAATAATGCGTTGTCTGCtat > 2:3526102/1‑150 (MQ=255) gAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACaa < 1:411853/150‑1 (MQ=255) cccGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAacg > 1:2336287/1‑150 (MQ=255) cccGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAacg > 1:1284474/1‑150 (MQ=255) gggCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTGAAATAATGCGTTGTCTGCTATCCAAacgac > 1:13857/2‑150 (MQ=255) cGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAacgac < 1:2654131/150‑1 (MQ=255) cacaAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGt > 1:3467829/1‑150 (MQ=255) aatcAAACATTGTTGGTCTATATCTCAACATTTCTTTTTCAACATTACACCGCCTTCTAGCATGCGTGGGGTTAAGTTTCCAATGTATACTGGACGATGTGAGGTAAAATAAGGCGTTGTCTGCTATACAAACGACGGTAAAACCTATaa < 2:3859869/147‑1 (MQ=255) aGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAg > 2:2880878/1‑150 (MQ=255) gCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGc > 1:1978953/1‑150 (MQ=255) aaaCAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCga > 2:2427990/1‑150 (MQ=255) acatgtttGCTCGATATCTCTAAATTTCTTTTTCTACTTTACATCGCCGTCTCGCAAGGGTGGGGTTATGTTTCCAAATTATCCTGGACGTTGTGTGTTTAAATATTGCTTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCgaga < 2:4093729/144‑1 (MQ=255) cAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGTGAt > 1:2705848/1‑150 (MQ=255) cAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGAGAGAt > 1:2900833/1‑150 (MQ=255) gTTGCTATATATCAATACATTTCTTTTTCTAAATACAATCGCCGTCTAGCATGCGTGGGGTTATGTTACAAAAGTATACTGGACGTTGTGTGTTTAAATAATGCGTTGTCTGAAATAAAAACGACGGTAAAACCTATAAGCGAGATTGcc < 2:3331829/150‑1 (MQ=255) tGCTGGATATCTATACATTTCTTTTTATACATTAATTCGCCGTCTAGAATGCGTGGGGTTATTTTTCAAATTTATAGTGGACGTTGTGTGTTTAAATAATGCTTTGTCTGATATACACACGACGGTAAAACCTATAAGCGAGATTGCCag < 1:346497/150‑1 (MQ=255) cTCGATATCTCTACTTTTTTGTTTCAACATTACTTCGCCTTCAAGCTAGCTTGGGTTTAATTTTCAAATTTATACTGGTCTTTTTTTGTTTAAATATTGCGTTTTATGATATACAAACGACGGTAAAACCTATAAGCGAGATTGCCagag < 2:3634580/150‑1 (MQ=255) ctatatCTCTACATTTCTTTTTCTCAATTACACCGCCTAATAGCAAGCGTGGGGTTAAGTTTCAAATTTATAGTGGAGTATGTGAGTTTAAATATTGCGTTGTCTGCTATAAAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGaa < 1:723159/148‑1 (MQ=255) cGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGaa > 2:1026654/1‑150 (MQ=255) cGATATCTATACATTTCTGTTTATACTTTACATCGCCGTCTAGAAAGGGTGGGGTTAAGTTTCCAATTTATACTGGACTTTGTGTGTTTAAATAATGCGTTGTCTGATATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGaa < 1:723084/150‑1 (MQ=255) atatCTCTACTTTTCTGTTTCTACATTACAGCGCCGTCTCGCAAGCGTGGGGGTATGTTTCCAATGTATAGGGGACGTGGTGTGGTTAAATAATGCGTGGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGaaaa < 2:944708/150‑1 (MQ=255) tatCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAAt > 2:3783730/1‑150 (MQ=255) tatCTATACATTTCTTTTTCTACATTACATCGCCGTCTAGCACGCGTGGGGTTATTTTACAAATTTATACTGGACTTTGTGTGTTTAAATAATGCTTTGTCTGATATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAAt < 1:3116624/150‑1 (MQ=255) tctACTTTTCTGTTTATACATTACATCGCCTTCTAGCATGCGTGGGGTTATTTTACAAATGTATCCTGGACTATGTGCGTTTAAATAATGCGTTGTCTGCTAAACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGtt < 1:2479087/150‑1 (MQ=255) tctACATTTCTTTTTCTACATTACATCGCCGTCTAGCACGCGCGGGGTTAAGTTTCAAAATTATACTGGACGTTGTGTGGTTAAATAATGCGTTGTCTGATATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGtt < 2:444681/150‑1 (MQ=255) ctACTTTTCTGTTTCTACATTCCATCGCCGTCTCGCAAGCGGGGGGGTATGTTTCCAATGTCTACGGGAGGAGGTGTGGTTAAATATTGGGTGGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTta < 1:2496320/150‑1 (MQ=255) ttttCTGTTAACACATTACCTCGCCGTCTAGCATGCGTGGGGTTAAGTTACAAAAGTATACGGCACGTTGTGAGTTTAAATAATGGGTTGTCTGATAAACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAg < 2:1132799/149‑1 (MQ=255) aTTTCTTTTTCTACATTACATCGCCGTCTAGCATGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAg < 2:2523744/150‑1 (MQ=255) aTTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAg > 1:4023443/1‑150 (MQ=255) aTTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGACAGAGAAAATGGTTATAAg > 1:4024513/1‑150 (MQ=255) tttttttttATACTTTACTGCGCCTTATAGCACGGGTGGGTTTATTTTTCAAAATTATACTGTAGGTTGTTTGTTTAAATATTGGTTTGTCTGATATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAgt < 1:436948/144‑1 (MQ=255) tCTGTTTCTACCTACCACCGCCGTCTCGCAAGCGAGGGGGTAAGTTTCCAATTTATCCTGGACGATGTTTGTTTAAATAATGCGTTGTCTGCTATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAgtgt < 2:2629769/150‑1 (MQ=255) tCTGTTTCTACATTACATCGCCGTCTAGCAAGCGTGGGGGTAAGTTTCCAAAGTATACTGGACGTTGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAgtgt < 2:944541/150‑1 (MQ=255) cTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTc > 2:639328/1‑150 (MQ=255) cTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTc > 2:2809304/1‑150 (MQ=255) cTGTTTCTACATAACATCGCCGTCTAGCACGCGTGGGGTTAAGTTTCCAAATTATACGGGAGGTTGTGTGTTTAAATAATGCGTTTTATGCTATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTc < 2:3310644/150‑1 (MQ=255) tttCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATACGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCtt > 2:2492690/1‑150 (MQ=255) tCTACTTTCCATGGCCGTCTTGCAAGCGTGGGGTTATTTTTCCAAAGTATACGGGACTATGTGTGGTTAAATAATGCGTGGTCTGCTATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTtct < 2:385198/150‑1 (MQ=255) tccatCGCCGTCTAGCACGCTCGGGGGTAATTTTCCAAAGTTTACTGGACGATGTGTGGTTAAATAATGCGTGGTCTGCAATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTa < 2:3960147/148‑1 (MQ=255) tacatCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTa > 2:1540559/1‑150 (MQ=255) catCGCCGTATAGCAAGCGTGGGGTTATGTTTCAAAAGTATACGGGACTTTTTGAGTTTAAATAATGCGTTGTCTGATATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACt < 1:554942/150‑1 (MQ=255) atCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTg > 1:3091370/1‑150 (MQ=255) gggttatAGAAAGCGTGGGGTTACGTTTCCAATGTATAGGGGCCGTTGTGTGTTTAAATATTGCGTTGTGTGGTTTAAAAACGTCGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTTCTGaaa < 2:1581114/144‑1 (MQ=255) gCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTTCTGaaa > 2:2739993/1‑150 (MQ=255) ccGACTAGCAAGCGTGGGGTTAAGTTTAAAATTTATACTGTACGTTTTTAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAg < 2:4255008/150‑1 (MQ=255) gtataccAAGCGTGGGTGTAATTTTCAAAATTATACTGGACTATGTGAGTTTAAAAATTGCGTTTTCTGATATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGAt < 2:1284474/144‑1 (MQ=255) cTAGAAAGGGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTTAGGTAAAATAATGCGTTGTCTGCTATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGAttt < 2:2084640/150‑1 (MQ=255) tAGCAAGGGTGGGGTTACTTTTCCAAAGTATACTGGACGATGTTTGGTAAAATAAGGCGTTGTCTGCAATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTc < 1:112577/150‑1 (MQ=255) aGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACTATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCa > 1:900237/1‑150 (MQ=255) aGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGTGGTTAAATAAGGCGTTGTATGCTATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCa < 2:3185434/150‑1 (MQ=255) cAAGCTTGGGGTTATGTTTCCAATGTTTAGTGGACGTTGTTAGTTTAAATATTGCTTTGTCTGATATAAAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATa < 2:813844/150‑1 (MQ=255) gCGTGGGGTTATTTTTCAAAATTATACTGGACGATGTGAGTTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATc < 2:1904638/150‑1 (MQ=255) gggggTAAGTTTCCAAAGTATACTGGACGTTGTGAGTTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGttt < 2:1413486/150‑1 (MQ=255) ggggTATGTTTCCAAAGTATACTGGACGATGTGTGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGtttt < 2:2264136/150‑1 (MQ=255) ggTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGttttca > 2:4245773/1‑148 (MQ=255) gTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAat > 1:933956/1‑150 (MQ=255) gTAAGTTTCCAAAGTATACGGGACTTTGTGTGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAat < 2:569269/150‑1 (MQ=255) tAAGTTTCCAAAGTATAGTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAata < 2:2613999/150‑1 (MQ=255) tAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAata > 1:3233819/1‑150 (MQ=255) aGTTTCCAAAGTATACTGGACGTTGTGAGGTTAAATAATGCGTTTTCTGATATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAAtata < 2:3964343/150‑1 (MQ=255) gTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATACGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATaa > 2:288198/1‑150 (MQ=255) gTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATaa > 2:3078606/1‑150 (MQ=255) ttCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAaca > 2:2796586/1‑150 (MQ=255) cAAAGTATACGGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAACACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCa < 1:2161369/150‑1 (MQ=255) aaatgTATAGTGGACGTTGTGTGTTTAAATATTGCTTTGTCTGCTATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCa < 1:4347787/146‑1 (MQ=255) aatgtttaCTGGACGTTGTGTGTTTAAATATGGGGTTGTCTGCTATAAAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCaa < 1:1999735/144‑1 (MQ=255) aaaTTATACTGGACTATGTTTTTTTAAATATTGCGTTTTCTGCTATACAAACGACGGTAAAACCAATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCaa < 1:2000717/150‑1 (MQ=255) atgTATACTGGACGATGTGTGGTTAAATATTGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAag < 2:3468311/148‑1 (MQ=255) tataCTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAagaga > 2:2138496/1‑150 (MQ=255) cgtGGACTTTGTGTGTTTAAATATTGGGTTGTCTGCTATACACACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAAGAGAGAt < 1:3437932/148‑1 (MQ=255) tGGACGTTGTGAGGTTAAATATTGCGTTGTCTGATATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAAGAGAGATaa < 1:1061862/150‑1 (MQ=255) gATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACCGAAAGATTTCATAATCGTTTTAATATAACACCAAGAGAGATAAGaaaa > 1:2058086/1‑150 (MQ=255) | CATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAAGAGAGATAAGAAAA > CP009273/567394‑567692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |