Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 651,654 A→G 24.6% intergenic (‑230/‑359) dcuC ← / → pagP anaerobic C4‑dicarboxylate transport/phospholipid:lipid A palmitoyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273651,6540AG24.6% 262.5 / 102.9 138intergenic (‑230/‑359)dcuC/pagPanaerobic C4‑dicarboxylate transport/phospholipid:lipid A palmitoyltransferase
Reads supporting (aligned to +/- strand):  ref base A (58/46);  new base G (20/14);  total (78/60)
Fisher's exact test for biased strand distribution p-value = 8.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.81e-01

Only 100 of 144 total aligned reads displayed.

GATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGTCATCAA  >  CP009273/651506‑651803
                                                                                                                                                    |                                                                                                                                                     
gATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTaa                                                                                                                                                      >  1:1189044/1‑150 (MQ=255)
gATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTaa                                                                                                                                                      >  1:372588/1‑150 (MQ=255)
gATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTaa                                                                                                                                                      >  1:215080/1‑150 (MQ=255)
gATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTaa                                                                                                                                                      >  1:215269/1‑150 (MQ=255)
       gCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAAt                                                                                                                                               >  1:3640304/1‑150 (MQ=255)
        cTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATg                                                                                                                                              <  2:3835087/150‑1 (MQ=255)
           aTTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGgtg                                                                                                                                           <  1:3420504/150‑1 (MQ=255)
                 aTCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCt                                                                                                                                     >  1:2051168/1‑150 (MQ=255)
                   cAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGc                                                                                                                                   >  2:2439238/1‑150 (MQ=255)
                   cAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGc                                                                                                                                   >  2:2439254/1‑150 (MQ=255)
                    aaGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACACAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCg                                                                                                                                  <  2:2425082/150‑1 (MQ=255)
                    aaGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCg                                                                                                                                  <  2:2425017/150‑1 (MQ=255)
                    aaGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCg                                                                                                                                  >  2:308236/1‑150 (MQ=255)
                         aaaCTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCtgt                                                                                                                             <  2:861664/150‑1 (MQ=255)
                           aCTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATCACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTgc                                                                                                                           <  2:2611683/150‑1 (MQ=255)
                            cTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATACAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTgcg                                                                                                                          >  1:48117/1‑150 (MQ=255)
                               ccATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTc                                                                                                                       >  2:3298628/1‑150 (MQ=255)
                                  ttAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaa                                                                                                                    >  2:3887660/1‑150 (MQ=255)
                                  ttAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaa                                                                                                                    >  2:3463706/1‑150 (MQ=255)
                                   tAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaaa                                                                                                                   >  1:3517106/1‑150 (MQ=255)
                                   tAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaaa                                                                                                                   >  1:3517083/1‑150 (MQ=255)
                                   tAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaaa                                                                                                                   >  2:516941/1‑150 (MQ=255)
                                        cATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGCGTTAGCTGCGGCTGTGCGCTCAAAAaataa                                                                                                              >  1:1761158/1‑150 (MQ=255)
                                              aGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAat                                                                                                        >  2:443962/1‑150 (MQ=255)
                                                ttGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAatat                                                                                                      <  1:4347227/150‑1 (MQ=255)
                                                 tGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATg                                                                                                     <  1:3367052/150‑1 (MQ=255)
                                                     gTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCa                                                                                                 >  1:2618076/1‑150 (MQ=255)
                                                     gTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCa                                                                                                 >  1:2322315/1‑150 (MQ=255)
                                                       ttttATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATa                                                                                               <  1:1859305/150‑1 (MQ=255)
                                                       ttttATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATa                                                                                               >  2:4094371/1‑150 (MQ=255)
                                                       ttttATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATa                                                                                               <  1:1859539/150‑1 (MQ=255)
                                                       ttttATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATa                                                                                               >  1:2938066/1‑150 (MQ=255)
                                                       ttttATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATa                                                                                               <  2:2900164/150‑1 (MQ=255)
                                                           ataCATAGATAACAACACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGtt                                                                                           <  1:1526716/150‑1 (MQ=255)
                                                           ataCATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGtt                                                                                           <  1:1526705/150‑1 (MQ=255)
                                                            taCATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTg                                                                                          >  1:2581634/1‑150 (MQ=255)
                                                              cATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGAc                                                                                        <  1:4030961/150‑1 (MQ=255)
                                                              cATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGAc                                                                                        >  1:1055943/1‑150 (MQ=255)
                                                              cATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGAc                                                                                        <  2:1465856/150‑1 (MQ=255)
                                                                 aGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGat                                                                                     >  1:4358190/1‑150 (MQ=255)
                                                                    tAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGatata                                                                                  <  1:606906/150‑1 (MQ=255)
                                                                     aaCAAAACGCATATTTAGCGGTTGGCAATTATCACATCATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGatatat                                                                                 <  2:3247349/150‑1 (MQ=255)
                                                                        aaaaCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatatt                                                                              >  1:786304/1‑150 (MQ=255)
                                                                        aaaaCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatatt                                                                              <  1:2205218/150‑1 (MQ=255)
                                                                        aaaaCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatatt                                                                              <  1:3538586/150‑1 (MQ=255)
                                                                        aaaaCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatatt                                                                              <  1:3384189/150‑1 (MQ=255)
                                                                        aaaaCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatatt                                                                              >  2:2565623/1‑150 (MQ=255)
                                                                           aCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatattata                                                                           >  2:3135567/1‑150 (MQ=255)
                                                                                tatTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTc                                                                     <  1:2781125/150‑1 (MQ=255)
                                                                                tatTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACtt                                                                      <  2:2458671/150‑1 (MQ=255)
                                                                                tatTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACtt                                                                      <  2:1969853/150‑1 (MQ=255)
                                                                                tatTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACtt                                                                      <  2:2458714/150‑1 (MQ=255)
                                                                                  tttAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCg                                                                    <  1:3319939/150‑1 (MQ=255)
                                                                                  tttAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCg                                                                    <  1:3319868/150‑1 (MQ=255)
                                                                                  tttAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCg                                                                    <  1:3600334/150‑1 (MQ=255)
                                                                                  tttAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCg                                                                    <  1:3319971/150‑1 (MQ=255)
                                                                                      gCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTaa                                                                <  2:1375778/150‑1 (MQ=255)
                                                                                        ggTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAga                                                              >  2:3927832/1‑150 (MQ=255)
                                                                                        ggTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAga                                                              >  1:1857332/1‑150 (MQ=255)
                                                                                         gTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAgat                                                             >  1:721964/1‑150 (MQ=255)
                                                                                          ttGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAgatg                                                            >  2:3434957/1‑150 (MQ=255)
                                                                                             gCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAtt                                                         <  1:3968139/150‑1 (MQ=255)
                                                                                              cAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAttg                                                        >  2:1519486/1‑150 (MQ=255)
                                                                                              cAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAttg                                                        >  2:2243886/1‑150 (MQ=255)
                                                                                                aTTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAttgtt                                                      <  1:505574/150‑1 (MQ=255)
                                                                                                 ttATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAttgttg                                                     >  2:3403728/1‑150 (MQ=255)
                                                                                                     cacaTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtc                                                 >  1:205570/1‑150 (MQ=255)
                                                                                                      acaTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtct                                                <  2:4098019/150‑1 (MQ=255)
                                                                                                       caTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtctc                                               <  2:1483118/150‑1 (MQ=255)
                                                                                                       caTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtctc                                               >  2:2533365/1‑150 (MQ=255)
                                                                                                        ataataATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCg                                              >  2:4224866/1‑150 (MQ=255)
                                                                                                             aatGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaaa                                         >  1:1329955/1‑150 (MQ=255)
                                                                                                             aatGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaaa                                         >  1:3521684/1‑150 (MQ=255)
                                                                                                             aatGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaaa                                         >  2:1148953/1‑150 (MQ=255)
                                                                                                               tgtgtgCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaaaaa                                       <  1:1122058/150‑1 (MQ=255)
                                                                                                                gtgtgCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaaaaaa                                      >  2:1460547/1‑150 (MQ=255)
                                                                                                                 tgtgCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaat                                     >  2:2707793/1‑150 (MQ=255)
                                                                                                                 tgtgCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaat                                     >  1:2244059/1‑150 (MQ=255)
                                                                                                                     cAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaataaaa                                 >  1:832039/1‑150 (MQ=255)
                                                                                                                     cAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaataaaa                                 >  1:4257525/1‑150 (MQ=255)
                                                                                                                      aaaTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGTTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaataaaat                                <  2:1189044/150‑1 (MQ=255)
                                                                                                                      aaaTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGTTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaataaaat                                <  2:372588/150‑1 (MQ=255)
                                                                                                                      aaaTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaataaaat                                >  2:4222460/1‑150 (MQ=255)
                                                                                                                       aaTTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAaaataaaata                               <  1:2525066/150‑1 (MQ=255)
                                                                                                                       aaTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAaaataaaata                               <  1:3126519/150‑1 (MQ=255)
                                                                                                                        aTTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAaataaaataa                              >  2:225645/1‑150 (MQ=255)
                                                                                                                        aTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAaataaaataa                              >  1:3099308/1‑150 (MQ=255)
                                                                                                                         ttGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAaataat                             >  1:2931425/1‑150 (MQ=255)
                                                                                                                         ttGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAaataat                             >  1:759594/1‑150 (MQ=255)
                                                                                                                         ttGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGTGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAaataat                             >  2:4360850/1‑150 (MQ=255)
                                                                                                                            aTGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAAtttt                          >  2:3202520/1‑150 (MQ=255)
                                                                                                                                 ggATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCtt                     >  2:1292224/1‑150 (MQ=255)
                                                                                                                                  gATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTg                    >  1:4239219/1‑150 (MQ=255)
                                                                                                                                        tGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCa              >  1:199745/1‑150 (MQ=255)
                                                                                                                                           aaaTTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCAttt           <  1:1411816/150‑1 (MQ=255)
                                                                                                                                            aaTTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCAtttt          >  1:3967809/1‑150 (MQ=255)
                                                                                                                                             aTTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCATTGATTGCATTTTg         >  2:194256/1‑150 (MQ=255)
                                                                                                                                              tttGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGt        <  1:3792529/150‑1 (MQ=255)
                                                                                                                                               ttgttgATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGtc       <  2:1343753/150‑1 (MQ=255)
                                                                                                                                                    aaTTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGTCATCaa  >  2:1778675/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGTCATCAA  >  CP009273/651506‑651803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: